BLASTX nr result

ID: Rehmannia24_contig00012663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00012663
         (799 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    71   5e-10
ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292...    69   2e-09
ref|XP_004292086.1| PREDICTED: uncharacterized protein LOC101295...    64   5e-08

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 42/122 (34%), Positives = 64/122 (52%)
 Frame = -3

Query: 368 MNILHWNVRGISNDLSKAALRHHCLITKPDWLCLVEPKTNISSIHSSYWTAMGLSVLTVN 189
           M IL+W VRGI N  +K AL++     KP  + + EP     S+   YW ++G+S   VN
Sbjct: 1   MIILYWTVRGIDNVDTKIALKNFFNCHKPLLIFVAEPMIAFESVPPWYWDSIGVSKYCVN 60

Query: 188 HRSGMLANIWILVSSRFTSASVLHMTDQFILVEAALSVGNFRIGFVHGHASYGRRRELWR 9
            R  +  N+W L   R  SA V+ ++DQ I +E +       +  V+    Y +RR+LW 
Sbjct: 61  GREILQPNLWAL-WGREVSAIVMFISDQCIALEISCHQSTVYVAAVYASTFYLKRRQLWA 119

Query: 8   DL 3
           +L
Sbjct: 120 EL 121


>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
           subsp. vesca]
          Length = 851

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = -3

Query: 368 MNILHWNVRGISNDLSKAALRHHCLITKPDWLCLVEPKTNISSIHSSYWTAMGLSVLTVN 189
           M I +WN+RGI+ND ++ A +        + LC+ EP   + SI +S+W  +G+  +  N
Sbjct: 1   MKIFYWNLRGIANDPTQNAFKEFVRSHSLEILCIAEPFVALESIPASFWRNLGMQFIGAN 60

Query: 188 HRSGMLANIWILVS-SRFTSASVLHMTDQFILVEAALSVGNFRIGFVHGHASYGRRRELW 12
            R     N+W+    S      VL+ +DQ + ++      N  +  V+   +   RR+LW
Sbjct: 61  DRGSQQPNLWVFCKISLVPWVRVLYSSDQQVSLQVMFDSTNCFVTAVYARTTVVGRRKLW 120

Query: 11  RDL 3
            D+
Sbjct: 121 EDI 123


>ref|XP_004292086.1| PREDICTED: uncharacterized protein LOC101295596 [Fragaria vesca
           subsp. vesca]
          Length = 370

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
 Frame = -3

Query: 368 MNILHWNVRGISNDLSKAALRHHCLITKPDWLCLVEPKTNISSIHSSYWTAMGLSVLTVN 189
           M I +WN+R I+ND ++  LR        D LC+ EP  ++ SI S +W +M L  ++ N
Sbjct: 1   MKIFYWNLRRIANDPTQDLLRKFVQDHHLDVLCIAEPFVSLDSIPSQFWMSMNLVEVSTN 60

Query: 188 HRSGMLANIWILVSSRFTSASVLHM------TDQFILVEAALSVGNFRIGFVHGHASYGR 27
                L+N+W+     F   S+LH+      TDQ + +   L      +  V+   +   
Sbjct: 61  DWGAALSNLWM-----FCKPSLLHVINVVSRTDQQVTITVTLDSVQCVLTSVYARTTMEG 115

Query: 26  RRELWRDL 3
           +R LW DL
Sbjct: 116 QRRLWIDL 123


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