BLASTX nr result

ID: Rehmannia24_contig00012594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00012594
         (821 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311103.2| myb family transcription factor family prote...    62   2e-07

>ref|XP_002311103.2| myb family transcription factor family protein [Populus trichocarpa]
            gi|550332397|gb|EEE88470.2| myb family transcription
            factor family protein [Populus trichocarpa]
          Length = 1716

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 76/294 (25%), Positives = 118/294 (40%), Gaps = 27/294 (9%)
 Frame = +1

Query: 19   SDIVGTINLKPDVKICGENSRPLDSMAAEPVSKNSSMGDTQVDEKPVMGFNVDSRELSGV 198
            SD+ GT +      +   +S+ +D M ++P          +  ++  +   VDS+ L+ V
Sbjct: 1133 SDLDGTEDNNASGILDHNDSKIVDKMVSDPA---------EAGKRADLALVVDSKVLNSV 1183

Query: 199  NGACTSEHDVRPSVVSTNVESVRVEEGD---------------DHGRSNGLSDSDNKALV 333
            N    S    +  +VS N ES R +  D               D   SN  +  + KA+ 
Sbjct: 1184 N-QLESLQAQKVLIVSINAESERDQAADKTVSVAEAGPVVGTVDASTSNANTAVELKAVA 1242

Query: 334  EVSXXXXXXXXXXXXLILPEDNSDNKKVEDGGADNSEATVIRCTSSEMKAEPSGNVSHPC 513
            EVS            L+LPE +                    C+SS +  + + N SH  
Sbjct: 1243 EVSNDVTGQE-----LLLPEKSL-------------------CSSSGLMQDSTSNASHHR 1278

Query: 514  V--DSRSSIQKESGCQKLPLQQNGHFASVESSTLFSVPIKYQRHSSTDAQSDAGANGISE 687
            V  DS S I +   C +   Q + H  SVE   + S+P +           D+      +
Sbjct: 1279 VNMDSCSDISR---CSENIHQVSVHLESVEKPPVISLPQENDLSIMNSVVQDSVVIQYEK 1335

Query: 688  KHSQ------KVVRTGDCQ----QHLSGYSLSDSVEPSQILRGYPVSVQTVKEI 819
            KH Q      +  +T  C+    QHLSG+ L    + SQILRGYP+ + T KE+
Sbjct: 1336 KHEQLQECRDEQGKTSFCRDDYFQHLSGHPLMSQNDSSQILRGYPLQIPTKKEM 1389


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