BLASTX nr result

ID: Rehmannia24_contig00012584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00012584
         (674 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006280274.1| hypothetical protein CARUB_v10026196mg [Caps...    59   1e-06

>ref|XP_006280274.1| hypothetical protein CARUB_v10026196mg [Capsella rubella]
            gi|482548978|gb|EOA13172.1| hypothetical protein
            CARUB_v10026196mg [Capsella rubella]
          Length = 541

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 45/245 (18%)
 Frame = -1

Query: 659  KGREMDTSVLESILRQKALENLKKFKGRLQ-TGPRSNNPKTNNESDVNKSSAQRVDDVQN 483
            +   M    LE+IL+++ALENLKKF+G  Q +G       + +E +  ++ +++V++ Q+
Sbjct: 279  RDNSMKDDDLEAILKKRALENLKKFRGVTQKSGMTRKEVPSVSEGEPLETESEKVEESQD 338

Query: 482  ESTMQGSFNAR------ETN---------KNSGPSLQRNLSQ----------LMEVKKLS 378
               M+   +        ET+         K SG +L  + SQ          +     +S
Sbjct: 339  HGVMEQKLSDSVVCKDLETSEKILHVVNAKESGTALANSASQQDQQPGNTAKVRASSSIS 398

Query: 377  DGEYVEK--EPEMAAQTVEHASNGTAVLG--CLEEDKNGSSNAGLAKPSDTSLGAGTTNX 210
                 +K   P +  ++V  AS   A  G     E  NGS+       S  +L A  T  
Sbjct: 399  SCSTKQKLIRPLLGKESVNIASRKEAAGGQNAEAESFNGSTIDKNCPESSLAL-APKTGG 457

Query: 209  XXXXXXXXXXXAGPMSEEHS---------------LEQGNEAKDGSQFKEKTMSVMRGGE 75
                         P S  H+                ++ +E KD SQ+++KTM+VMRGGE
Sbjct: 458  ENIEPTKVSSSLNPQSSSHADTETLDETKGGSESEQKKIDETKDESQYEQKTMTVMRGGE 517

Query: 74   MVQVS 60
            MVQVS
Sbjct: 518  MVQVS 522


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