BLASTX nr result
ID: Rehmannia24_contig00012531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00012531
(537 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27634.3| unnamed protein product [Vitis vinifera] 87 2e-15
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Popu... 86 4e-15
ref|XP_006386676.1| pentatricopeptide repeat-containing family p... 86 4e-15
gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis] 84 2e-14
ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ... 82 1e-13
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_004491942.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_006827884.1| hypothetical protein AMTR_s00008p00117710 [A... 79 5e-13
ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Caps... 79 9e-13
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ... 78 1e-12
gb|EOX95524.1| Pentatricopeptide repeat-containing protein, puta... 78 1e-12
gb|ESW04026.1| hypothetical protein PHAVU_011G061000g [Phaseolus... 77 3e-12
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar... 76 6e-12
ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutr... 75 7e-12
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,... 70 3e-10
>emb|CBI27634.3| unnamed protein product [Vitis vinifera]
Length = 355
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 165
AG+LK AYK LK+MLDAGC+PNHVTDT LDFL EIE+LRYKKASI+R++ DD+S
Sbjct: 301 AGQLKAAYKFLKLMLDAGCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDDSS 355
>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 165
AG+LK AYK LK+MLDAGC+PNHVTDT LDFL EIE+LRYKKASI+R++ DD+S
Sbjct: 738 AGQLKAAYKFLKLMLDAGCSPNHVTDTTLDFLGKEIEKLRYKKASIIRTSKDDSS 792
>ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Populus trichocarpa]
gi|550345304|gb|EEE81962.2| hypothetical protein
POPTR_0002s18390g [Populus trichocarpa]
Length = 776
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 4 GRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 156
GRLKDAYK LKMMLDAGC PNHVTDT LDFL EIE+LRY+KASIMR D
Sbjct: 724 GRLKDAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 774
>ref|XP_006386676.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345301|gb|ERP64473.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 776
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 4 GRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 156
GRLKDAYK LKMMLDAGC PNHVTDT LDFL EIE+LRY+KASIMR D
Sbjct: 724 GRLKDAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKLRYQKASIMRQKDD 774
>gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis]
Length = 788
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDA 162
AG+LKDAYK LKMMLDAGC PNHVTDT LDFL EIE+ Y+KASIMR+ DD+
Sbjct: 735 AGQLKDAYKFLKMMLDAGCIPNHVTDTTLDFLGKEIEKESYQKASIMRNKDDDS 788
>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
[Medicago truncatula] gi|355496560|gb|AES77763.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 791
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 165
AGRLKDAYK LKMM+DAGC PNHVTDT LD+L EI++LRY+KASI+ S DD S
Sbjct: 738 AGRLKDAYKFLKMMIDAGCTPNHVTDTTLDYLVREIDKLRYQKASIL-SKKDDPS 791
>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Glycine max]
Length = 768
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 165
AGRLKDAYK LKMMLDAGC+PNHVTDT LD+L EI++LRY++ASI+ S DD S
Sbjct: 715 AGRLKDAYKFLKMMLDAGCSPNHVTDTTLDYLGREIDKLRYQRASIL-SEKDDPS 768
>ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Fragaria vesca subsp. vesca]
Length = 789
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 156
AGRLKDAYK LKMMLD+GC PNHVTDT LDFL EIE+ RY+KAS +R+ D
Sbjct: 737 AGRLKDAYKFLKMMLDSGCIPNHVTDTTLDFLGKEIEKSRYQKASFVRNKDD 788
>ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like isoform X1 [Solanum tuberosum]
Length = 816
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 159
AG+LK +YK L+MML+AGCAPN VTDT LDFLE EIE+LRY+KAS+ R N D+
Sbjct: 762 AGQLKQSYKFLRMMLEAGCAPNQVTDTTLDFLEKEIEKLRYQKASMKRPNVDN 814
>ref|XP_004491942.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cicer arietinum]
Length = 793
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTD 156
AGR+KDAYK LKMMLDAGC PNHVTDT LD+L EI++LRY+KASI+ D
Sbjct: 740 AGRVKDAYKFLKMMLDAGCTPNHVTDTTLDYLVREIDKLRYQKASILSEKDD 791
>ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Solanum lycopersicum]
Length = 819
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 159
AG+LK +YK L+MML+AGCAPN VTDT LDFLE EIE+LRY+KAS+ R N D+
Sbjct: 765 AGQLKQSYKFLRMMLEAGCAPNQVTDTTLDFLEKEIEKLRYQKASMKRPNVDN 817
>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
gi|449523383|ref|XP_004168703.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMR 144
AGRLKDAYK LKMMLD+GC+PNHVTDT LDFL E+E+ RY+KASI+R
Sbjct: 751 AGRLKDAYKFLKMMLDSGCSPNHVTDTTLDFLGREMEKARYEKASIIR 798
>ref|XP_006827884.1| hypothetical protein AMTR_s00008p00117710 [Amborella trichopoda]
gi|548832519|gb|ERM95300.1| hypothetical protein
AMTR_s00008p00117710 [Amborella trichopoda]
Length = 788
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMR 144
AGR+K+AY+ LK MLDAGC PNH+TDTILDFLE EIE+LRY+KAS+ R
Sbjct: 735 AGRVKEAYEYLKAMLDAGCPPNHITDTILDFLEREIEKLRYEKASMKR 782
>ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Capsella rubella]
gi|482558640|gb|EOA22832.1| hypothetical protein
CARUB_v10003556mg [Capsella rubella]
Length = 802
Score = 78.6 bits (192), Expect = 9e-13
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRS--NTDDAS 165
AG+LK+AYK LKMMLDAGC PNHVTDTILD+L EIE+ R++KAS +R+ N D +S
Sbjct: 746 AGKLKEAYKYLKMMLDAGCLPNHVTDTILDYLGKEIEKARFEKASFVRNKPNNDPSS 802
>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297320808|gb|EFH51230.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 802
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 159
AG+LK+AYK LK MLDAGC PNHVTDTILD+L E+E+ R+KKAS +R+ T++
Sbjct: 746 AGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFVRNKTNN 798
>gb|EOX95524.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 807
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 159
AG+L+DAYK LKMMLDAGC+PNHVTDTILD L EIE++R +KAS++R++ D
Sbjct: 753 AGQLQDAYKFLKMMLDAGCSPNHVTDTILDNLGKEIEKMRLQKASMVRTDNGD 805
>gb|ESW04026.1| hypothetical protein PHAVU_011G061000g [Phaseolus vulgaris]
Length = 718
Score = 77.0 bits (188), Expect = 3e-12
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDDAS 165
AG LKDAYK LKMMLDAGC PNHVTDT LD+L EI++LR+++ASI+ S DD S
Sbjct: 665 AGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRFQRASIL-SEKDDPS 718
>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
[Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
At4g01570/T15B16_21 [Arabidopsis thaliana]
gi|332656643|gb|AEE82043.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 805
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 159
AG+LK+AYK LK MLDAGC PNHVTDTILD+L E+E+ R+KKAS +R+ ++
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFVRNKPNN 800
>ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutrema salsugineum]
gi|557097371|gb|ESQ37807.1| hypothetical protein
EUTSA_v10028437mg [Eutrema salsugineum]
Length = 801
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLRYKKASIMRSNTDD 159
AG+LK+AYK LK MLDA C PNHVTDTILD+L E+E+ R+KKAS +R+ D+
Sbjct: 745 AGKLKEAYKYLKAMLDANCLPNHVTDTILDYLGKEMEKARFKKASFVRNKRDN 797
>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 898
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +1
Query: 1 AGRLKDAYKVLKMMLDAGCAPNHVTDTILDFLESEIERLR 120
AGRLKDAYK LKMMLDAGC PNHVTDT LDFL EIE+ R
Sbjct: 770 AGRLKDAYKFLKMMLDAGCLPNHVTDTTLDFLAKEIEKQR 809