BLASTX nr result
ID: Rehmannia24_contig00012276
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia24_contig00012276 (1173 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 280 1e-72 pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 266 1e-68 gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 264 6e-68 gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 250 7e-64 gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Men... 250 7e-64 gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subu... 250 9e-64 gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Men... 249 1e-63 gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 248 3e-63 pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate ... 238 3e-60 ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyro... 231 6e-58 pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Ger... 225 3e-56 gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma... 218 5e-54 ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 215 2e-53 ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 213 9e-53 gb|EPS64735.1| geranyl diphosphate synthase small subunit, parti... 212 2e-52 dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] 212 2e-52 ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 203 1e-49 gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 201 4e-49 ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citr... 196 2e-47 ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt... 195 3e-47 >gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus] Length = 297 Score = 280 bits (715), Expect = 1e-72 Identities = 152/294 (51%), Positives = 186/294 (63%), Gaps = 3/294 (1%) Frame = +1 Query: 61 MATGISHSHLNAKTNLFP---KSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIP 231 MA G++H N K+ LFP KS T P +A + Q+Y +IE+D+E+YLKKAIP Sbjct: 1 MAHGLTH--FNTKSGLFPSITKSKTTRPSTRPVILAMTRTQTYRATIESDIESYLKKAIP 58 Query: 232 IRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEH 411 IR+PESVFEPMHHLTFAAPRT+A ALCVAACELVGGD Y HE+ Sbjct: 59 IRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHEN 118 Query: 412 LPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITR 591 LPLTD P K + HK++PNIELLTGDGIIPFGLEL+ARSMD +NN D+ILR IIE+TR Sbjct: 119 LPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTR 178 Query: 592 ATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXK 771 GS+G+V+GQY ELG++++ D E++EYV KKKEG LH K Sbjct: 179 VMGSEGIVEGQYHELGLNQL--NDLELIEYVCKKKEGTLHACGAACGAILGGCDEDKIEK 236 Query: 772 LRNFGLYAGMLRGLLGKNNSGIMXXXXXXXXXXXXXXXXSFQGKRTELIASLVE 933 LR FGLY G ++GLLGKN SG SF G++ ELI + E Sbjct: 237 LRRFGLYVGTVQGLLGKNRSG-FEGRIKELKELAVKELESFGGEKIELIRGVFE 289 >pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus Length = 273 Score = 266 bits (680), Expect = 1e-68 Identities = 142/275 (51%), Positives = 177/275 (64%), Gaps = 2/275 (0%) Frame = +1 Query: 154 MAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELV 333 M+ + Q+Y +IE+D+E+YLKKAIPIR+PESVFEPMHHLTFAAPRT+A ALCVAACELV Sbjct: 1 MSLTRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 60 Query: 334 GGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGL 513 GGD Y HE+LPLTD P K + HK++PNIELLTGDGIIPFGL Sbjct: 61 GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSKSEIQHKFDPNIELLTGDGIIPFGL 120 Query: 514 ELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKK 693 EL+ARSMD +NN D+ILR IIE+TR GS+G+V+GQY ELG++++ D E++EYV KK Sbjct: 121 ELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQL--NDLELIEYVCKK 178 Query: 694 KEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRGLLGKNNSGIMXXXXXXXXXXX 873 KEG LH KLR FGLY G ++GLLGKN SG Sbjct: 179 KEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLLGKNRSG-FEGRIKELKELA 237 Query: 874 XXXXXSFQGKRTELIASL--VEPSLPAAQK*NHEY 972 SF G++ ELI + +E SL + +H + Sbjct: 238 VKELESFGGEKIELIRGVFELEHSLAGVEGHHHHH 272 >gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia] Length = 295 Score = 264 bits (674), Expect = 6e-68 Identities = 155/296 (52%), Positives = 183/296 (61%), Gaps = 9/296 (3%) Frame = +1 Query: 82 SHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 261 SHL KT F +S+ + ++AAQN SYW SI+AD+ TYLKKAIPIRSPE+VFEP Sbjct: 6 SHLPIKTRSFFCNSS------AQPVSAAQNASYWSSIDADINTYLKKAIPIRSPETVFEP 59 Query: 262 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP- 438 MHHLTFAAP TTA ALCVAACEL GG+ Y H+HLPLTDRPRP Sbjct: 60 MHHLTFAAPTTTASALCVAACELFGGNRTQALPAASAIHLIHAAAYTHDHLPLTDRPRPE 119 Query: 439 -KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 615 KP + HK+NPNIELLTGDGI PFG ELLA S+D + D+ILRV+IEI+RA+GSQG+V Sbjct: 120 SKPDIQHKFNPNIELLTGDGIAPFGFELLANSVD--TTHPDRILRVVIEISRASGSQGLV 177 Query: 616 DGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYA 795 DG Y+E I + S +E +EYVSKKK GE+H KLRNFGLYA Sbjct: 178 DGLYREKQIVDQRSR-FEFIEYVSKKKYGEMHACGAASGVILAGGDEEQIQKLRNFGLYA 236 Query: 796 GMLRGL------LGKNNSGIMXXXXXXXXXXXXXXXXSFQGKRTELIASLV-EPSL 942 G +RG+ L K N + FQGK ELI+SLV EP L Sbjct: 237 GTVRGMIEMKSGLEKKNIAQIEKIIIKFQQLAMKEMEGFQGKNAELISSLVTEPIL 292 >gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] Length = 299 Score = 250 bits (639), Expect = 7e-64 Identities = 140/300 (46%), Positives = 182/300 (60%), Gaps = 6/300 (2%) Frame = +1 Query: 61 MATGISHSHLNAKTNLFPKSSTNLSRFTPRAM---AAAQNQSYWVSIEADVETYLKKAIP 231 MA IS +T S ++LS TP + W +IE+D++T+LKK+IP Sbjct: 1 MAKAISSFINGGRTTFLSISRSDLSPTTPPHRPNSVICMKSNSWANIESDIQTHLKKSIP 60 Query: 232 IRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEH 411 IR+PE VFEPMH+LTFAAPRTTAPALC+AACE+VGGD Y HE+ Sbjct: 61 IRAPEDVFEPMHYLTFAAPRTTAPALCIAACEVVGGDGDQAMAAAAAIHLVHAAAYAHEN 120 Query: 412 LPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITR 591 LPLTDR RPKP + HK+N NIELLTGDGI+P+G ELLA+SMD NN D+ILRVIIEIT+ Sbjct: 121 LPLTDRRRPKPPIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQ 178 Query: 592 ATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXK 771 A GS+G++DGQ++EL + + + ++EYV KKKEGEL+ K Sbjct: 179 AAGSKGIIDGQFRELDVID-SEINMGLIEYVCKKKEGELNACGAACGAILGGGSEEEIGK 237 Query: 772 LRNFGLYAGMLRGL---LGKNNSGIMXXXXXXXXXXXXXXXXSFQGKRTELIASLVEPSL 942 LR FGLYAGM++GL +GKN I S + ++ + I+SL+E L Sbjct: 238 LRKFGLYAGMIQGLVHGVGKNREEIQ-ELVRKLRYLAMEELKSLKNRKIDTISSLLETDL 296 >gb|ABR15421.1| geranyl pyrophosphate synthase small subunit [Mentha canadensis] Length = 313 Score = 250 bits (639), Expect = 7e-64 Identities = 148/312 (47%), Positives = 186/312 (59%), Gaps = 19/312 (6%) Frame = +1 Query: 73 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 213 I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD++ Y Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIDRY 62 Query: 214 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 393 LKK+I IR PE+VF PMHHLTFAAP T A ALC+AACELVGGD Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAA 122 Query: 394 XYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 564 Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182 Query: 565 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 744 LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+H Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEMHACGAACGAILG 241 Query: 745 XXXXXXXXKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXXXXSFQGKRTELI 918 KLRNFGLY G LRG++ NS I F GK EL+ Sbjct: 242 GAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEELGGFHGKNAELM 301 Query: 919 ASLV-EPSLPAA 951 +SLV EPSL AA Sbjct: 302 SSLVAEPSLYAA 313 >gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita] gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita] Length = 313 Score = 250 bits (638), Expect = 9e-64 Identities = 148/312 (47%), Positives = 185/312 (59%), Gaps = 19/312 (6%) Frame = +1 Query: 73 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 213 I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD+E Y Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIERY 62 Query: 214 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 393 LKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQAMAAAAAIHLVHAA 122 Query: 394 XYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 564 Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182 Query: 565 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 744 LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+H Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEMHACGAACGAILG 241 Query: 745 XXXXXXXXKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXXXXSFQGKRTELI 918 KLRNFGLY G LRG++ NS I F GK EL+ Sbjct: 242 GAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEELGGFHGKNAELM 301 Query: 919 ASLV-EPSLPAA 951 +SLV EPSL AA Sbjct: 302 SSLVAEPSLYAA 313 >gb|ABW86880.1| geranyl pyrophosphate synthase small subunit [Mentha x piperita] Length = 313 Score = 249 bits (637), Expect = 1e-63 Identities = 148/312 (47%), Positives = 186/312 (59%), Gaps = 19/312 (6%) Frame = +1 Query: 73 ISHSHLNAKTNLFPKSSTNLSRFT-------------PRAMAAAQNQSYWVSIEADVETY 213 I+ SH+N+KT K+ ++LSR + P AAQ+Q YW +IEAD++ Y Sbjct: 3 INLSHINSKTCFPLKTRSDLSRSSSGRCMPTAAAAAFPIIATAAQSQPYWAAIEADIDRY 62 Query: 214 LKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXX 393 LKK+I IR PE+VF PMHHLTFAAP T A ALC+AACELVGGD Sbjct: 63 LKKSITIRPPETVFGPMHHLTFAAPATAASALCLAACELVGGDRSQAMAAAAAIHLVHAA 122 Query: 394 XYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQ-NNQDKI 564 Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA S+D A+ ++ D+I Sbjct: 123 AYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRI 182 Query: 565 LRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 744 LRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+H Sbjct: 183 LRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEMHACGAACGAILG 241 Query: 745 XXXXXXXXKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXXXXSFQGKRTELI 918 KLRNFGLY G LRG++ NS I F GK EL+ Sbjct: 242 GAAEEEIQKLRNFGLYQGTLRGMMEMTNSHQLIDENIIGKLKELALEELGGFHGKNAELM 301 Query: 919 ASLV-EPSLPAA 951 +SLV EPSL AA Sbjct: 302 SSLVAEPSLYAA 313 >gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia miltiorrhiza] Length = 314 Score = 248 bits (634), Expect = 3e-63 Identities = 140/286 (48%), Positives = 176/286 (61%), Gaps = 4/286 (1%) Frame = +1 Query: 85 HLNAKTNLFPKSSTNLSRFTPRAMAA-AQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 261 ++N K++ K+ +NLSR + A AQN SYW +IEAD++TYLKK+I IRSPE+VFEP Sbjct: 18 YVNTKSSFPFKTRSNLSRSSRACTAVVAQNHSYWAAIEADIDTYLKKSIAIRSPETVFEP 77 Query: 262 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP- 438 MHHLTFAAPRT A A+CVAACELVGG+ Y HEHLPLTDRPRP Sbjct: 78 MHHLTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLTDRPRPN 137 Query: 439 -KPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 615 KP + HKY PNIELLTGDG+ FG ELLA S+ N ++ILRVIIEI+RA+GS+G++ Sbjct: 138 SKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHPNPERILRVIIEISRASGSEGII 197 Query: 616 DGQYQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYA 795 DG Y+E I + S ++ +EY+ +KK GE+H KLRNFG YA Sbjct: 198 DGFYREKEIVDQHSR-FDFIEYLCRKKYGEMHACAAASGAILAGGAEEEIQKLRNFGHYA 256 Query: 796 GMLRGLLGKN-NSGIMXXXXXXXXXXXXXXXXSFQGKRTELIASLV 930 G L GLL K ++ + F GK EL+ SLV Sbjct: 257 GTLIGLLHKKIDTPQIQNVIGKLKDLALKELEGFHGKNVELLCSLV 302 >pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ipp gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (i) gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (i) gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii) gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium, Ipp, And Dmaspp (ii) gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Magnesium And Gpp Length = 274 Score = 238 bits (608), Expect = 3e-60 Identities = 135/273 (49%), Positives = 166/273 (60%), Gaps = 6/273 (2%) Frame = +1 Query: 172 QSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXX 351 Q YW +IEAD+E YLKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61 Query: 352 XXXXXXXXXXXXXXXYIHEHLPLTDRPRP--KPTVHHKYNPNIELLTGDGIIPFGLELLA 525 Y+HEHLPLTD RP KP + HKY PN+ELLTGDGI+PFG ELLA Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLPLTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFELLA 121 Query: 526 RSMDLAQ-NNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEG 702 S+D A+ ++ D+ILRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK G Sbjct: 122 GSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYG 180 Query: 703 ELHXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXX 876 E+H KLRNFGLY G LRG++ NS I Sbjct: 181 EMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELAL 240 Query: 877 XXXXSFQGKRTELIASLV-EPSLPAAQK*NHEY 972 F GK EL++SLV EPSL AA +H + Sbjct: 241 EELGGFHGKNAELMSSLVAEPSLYAAHHHHHHH 273 >ref|XP_004244349.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Solanum lycopersicum] Length = 269 Score = 231 bits (588), Expect = 6e-58 Identities = 127/268 (47%), Positives = 165/268 (61%), Gaps = 10/268 (3%) Frame = +1 Query: 166 QNQSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDX 345 QNQSYW SIE+D+E +LKKAI IR+PESVFEPMH+LTF P++TAPALCVAACELVGGD Sbjct: 3 QNQSYWASIESDIEAHLKKAISIRAPESVFEPMHYLTFTTPKSTAPALCVAACELVGGDR 62 Query: 346 XXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHK-------YNPNIELLTGDGIIP 504 Y H+H+ + R P P + HK + PNIELLTGDGI+P Sbjct: 63 DRAMAAASAIHLMHVATYTHQHMTMA-RTEPGPVIEHKDIEPEHKFGPNIELLTGDGIMP 121 Query: 505 FGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYV 684 F +EL+ ++M A+ N DKI+ VIIE+TRA GSQG ++GQY+EL + G+ D E EYV Sbjct: 122 FAIELIVKAMSPARKNSDKIVSVIIEVTRAFGSQGQLEGQYRELEWAQSGNEDEETFEYV 181 Query: 685 SKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRGLL-GKN-NSGIMXXXXXX 858 KKKEGE+H +LRN+GLY G+++G++ G+N N + Sbjct: 182 CKKKEGEIHACGATCGAILGDGNDEEIERLRNYGLYVGIIQGIINGRNYNKKMEKRVNEL 241 Query: 859 XXXXXXXXXXSFQGKR-TELIASLVEPS 939 SF+GK+ + IASLVE S Sbjct: 242 RILAMKELNTSFKGKKLMKQIASLVEES 269 >pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl Pyrophosphate Synthase In Complex With Ligands Length = 264 Score = 225 bits (573), Expect = 3e-56 Identities = 129/271 (47%), Positives = 160/271 (59%), Gaps = 4/271 (1%) Frame = +1 Query: 172 QSYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXX 351 Q YW +IEAD+E YLKK+I IR PE+VF PMHHLTFAAP T A LC+AACELVGGD Sbjct: 2 QPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAAPATAASTLCLAACELVGGDRSQ 61 Query: 352 XXXXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARS 531 Y+HEHLP P + HKY PN+ELLTGDGI+PFG ELLA S Sbjct: 62 AMAAAAAIHLVHAAAYVHEHLP--------PAIQHKYGPNVELLTGDGIVPFGFELLAGS 113 Query: 532 MDLAQ-NNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGEL 708 +D A+ ++ D+ILRVIIEI+RA G +G++ G ++E I + G+T + +EYV KKK GE+ Sbjct: 114 VDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVD-GNTSLDFIEYVCKKKYGEM 172 Query: 709 HXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRGLLGKNNSG--IMXXXXXXXXXXXXXX 882 H KLRNFGLY G LRG++ NS I Sbjct: 173 HACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKELALEE 232 Query: 883 XXSFQGKRTELIASLV-EPSLPAAQK*NHEY 972 F GK EL++SLV EPSL AA +H + Sbjct: 233 LGGFHGKNAELMSSLVAEPSLYAAHHHHHHH 263 >gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma cacao] Length = 300 Score = 218 bits (554), Expect = 5e-54 Identities = 114/253 (45%), Positives = 149/253 (58%), Gaps = 3/253 (1%) Frame = +1 Query: 82 SHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFEP 261 SH+N L N + P + + NQSYW SI AD+E +LK+AIP+R P SV +P Sbjct: 6 SHINGNPLLQVPCRPNPMPYKPMMVTMSCNQSYWASINADIEAHLKQAIPVREPLSVSQP 65 Query: 262 MHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPK 441 MHHLTFA P+ TAPALCVAACELVGG + HE LPLT RP+ Sbjct: 66 MHHLTFACPKNTAPALCVAACELVGGHRDQALPAASALHLMYAASFTHEQLPLTQSSRPR 125 Query: 442 PTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDG 621 T+ H Y PNIELL GD +IP GLELLARS D A + +++LRV++EITRATGSQG++ G Sbjct: 126 STIQHAYGPNIELLIGDAMIPSGLELLARSDDPAHTDSERVLRVMVEITRATGSQGMIHG 185 Query: 622 QYQELGIDEIGSTDYEI---VEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLY 792 QY E+ + G+ + +E +S+K EG LH K+R +GLY Sbjct: 186 QYYEVERCQSGNKEASYMVEIERISEKYEGALHACAAACGAIVGGGSEEEIEKMRRYGLY 245 Query: 793 AGMLRGLLGKNNS 831 G ++G+L + S Sbjct: 246 IGKIQGMLNRIRS 258 >ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 308 Score = 215 bits (548), Expect = 2e-53 Identities = 115/237 (48%), Positives = 147/237 (62%), Gaps = 9/237 (3%) Frame = +1 Query: 139 FTPRAMAAAQNQS----YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPA 306 F+ R +A + S YW I AD+ET+LK+AIP+R P VFEPMHHLTFAAPR+ APA Sbjct: 31 FSRRPVACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPA 90 Query: 307 LCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP--KPTVHHKYNPNIEL 480 LC+AACELVGG + HE++PLTDRPRP +P HH + PNIEL Sbjct: 91 LCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIEL 150 Query: 481 LTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDE-IGS 657 LTGDG+IPF ELLA+ + AQ+N D+ILRV+IEI+RA GSQG+V+GQY E D+ +G Sbjct: 151 LTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGD 210 Query: 658 TDYEI--VEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRGLLGK 822 + + + V KKKEG H KLR +GLY G ++G+ K Sbjct: 211 ELFHVAWLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNK 267 >ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa] gi|550321901|gb|EEF06199.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa] Length = 312 Score = 213 bits (543), Expect = 9e-53 Identities = 116/244 (47%), Positives = 150/244 (61%), Gaps = 9/244 (3%) Frame = +1 Query: 112 PKSSTNLSRFTPRAMAAA---------QNQSYWVSIEADVETYLKKAIPIRSPESVFEPM 264 P+S+TN + R M A N+SYW S+ +++ +LK+AIPIR P SVFEPM Sbjct: 21 PRSNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLSVFEPM 80 Query: 265 HHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKP 444 HHLTFAAPRTTAPALC+AACELVGG+ HEH+ T + Sbjct: 81 HHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHILSTGN---RA 137 Query: 445 TVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQ 624 + H + NIELLTGDG++PFGLELLA+S DL QNN ++ILRVIIEIT+A GSQG+ GQ Sbjct: 138 RIGHSFGSNIELLTGDGMVPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMALGQ 197 Query: 625 YQELGIDEIGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYAGML 804 Y + + G +DY +++V KKKEGELH KLR +GLY G++ Sbjct: 198 YNQF---QHGQSDY--IDHVCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYGLYVGLM 252 Query: 805 RGLL 816 +G+L Sbjct: 253 QGVL 256 >gb|EPS64735.1| geranyl diphosphate synthase small subunit, partial [Genlisea aurea] Length = 211 Score = 212 bits (540), Expect = 2e-52 Identities = 109/211 (51%), Positives = 135/211 (63%), Gaps = 1/211 (0%) Frame = +1 Query: 175 SYWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXX 354 SYW I+ DV+ YLK+AIP PE+V+EPM HLTFAAP TTA +LCVAACELVGGD Sbjct: 1 SYWEGIQCDVQLYLKEAIPRGPPEAVYEPMRHLTFAAPTTTASSLCVAACELVGGDRKQA 60 Query: 355 XXXXXXXXXXXXXXYIHEHLPLTD-RPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARS 531 Y HEHLPLT+ P + + H+Y PNIELLTGDG+IPFG+EL+A+S Sbjct: 61 IAAAAALHLMHAALYAHEHLPLTEGHPPSRRPIEHRYGPNIELLTGDGLIPFGVELVAQS 120 Query: 532 MDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYEIVEYVSKKKEGELH 711 MD + NN D+IL+VIIEITRATGSQG+VDG Y+ ++ +D +EYV KK EGE+H Sbjct: 121 MDPSSNNHDRILKVIIEITRATGSQGMVDGLYRRKNLELHSDSDITELEYVCKKIEGEIH 180 Query: 712 XXXXXXXXXXXXXXXXXXXKLRNFGLYAGML 804 +LR FGL G + Sbjct: 181 ACGGACGAILGGAGEEEIERLRKFGLLVGTI 211 >dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 212 bits (540), Expect = 2e-52 Identities = 117/252 (46%), Positives = 151/252 (59%), Gaps = 4/252 (1%) Frame = +1 Query: 79 HSHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRSPESVFE 258 H +L A+ L P +A + +QSYW S+ AD++T+LK+AIPIR P +VFE Sbjct: 10 HGNLIARAVSSSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQAIPIRQPLAVFE 69 Query: 259 PMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRP 438 PM HL +AP+T+APALC+AACELVGG HE+LPLTDRPRP Sbjct: 70 PMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPRP 129 Query: 439 KP-TVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVV 615 P T Y PNIELL DGIIP+G ELLAR D A+NN +++LR IIEI+RA GSQGV+ Sbjct: 130 MPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVI 189 Query: 616 DGQYQELGIDEI-GSTDYEI--VEYVSKKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFG 786 +GQY E +E G + + ++ V +KKEG LH KLR +G Sbjct: 190 EGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYG 249 Query: 787 LYAGMLRGLLGK 822 LY GM++G+L K Sbjct: 250 LYVGMVQGILSK 261 >ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cicer arietinum] Length = 302 Score = 203 bits (516), Expect = 1e-49 Identities = 104/216 (48%), Positives = 133/216 (61%), Gaps = 3/216 (1%) Frame = +1 Query: 178 YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXX 357 YW S++AD+E +LK++I I+ P VFEPMHHL F AP+TT PALC+AACELVGG Sbjct: 50 YWASLQADIEAHLKQSITIKEPLVVFEPMHHLVFNAPKTTVPALCLAACELVGGQRNQAI 109 Query: 358 XXXXXXXXXXXXXYIHEHLPLTDRPRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMD 537 Y HEHL L+DRP+PKP + H Y PN+ELLTGDGI+PFG ELLARS Sbjct: 110 SAASALLLMEAATYTHEHLLLSDRPKPKPVITHAYGPNVELLTGDGIVPFGFELLARSN- 168 Query: 538 LAQNNQDKILRVIIEITRATGSQGVVDGQYQ---ELGIDEIGSTDYEIVEYVSKKKEGEL 708 N ++ILRV++EI+RA GS GV+D QY+ + G D E + V +K EGEL Sbjct: 169 -GGENSERILRVMVEISRAVGSGGVIDAQYRKTMDSGSDGDEMCHVEGIRRVVEKYEGEL 227 Query: 709 HXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRGLL 816 H +LRN+G Y GM++G+L Sbjct: 228 HACGAVCGGVLGGGSEEEIERLRNYGFYVGMIQGML 263 >gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Morus notabilis] Length = 306 Score = 201 bits (512), Expect = 4e-49 Identities = 105/230 (45%), Positives = 140/230 (60%), Gaps = 8/230 (3%) Frame = +1 Query: 145 PRAMAAAQNQS-YWVSIEADVETYLKKAIPIRSPESVFEPMHHLTFAAPRTTAPALCVAA 321 PR M +Q+QS Y SI AD+E +LK+AIP++SP SV+ PMHH+TF+AP APALCVAA Sbjct: 33 PRKMTTSQDQSSYRASITADIEAHLKQAIPLKSPLSVYAPMHHMTFSAPPNPAPALCVAA 92 Query: 322 CELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPLTDRPRPKP----TVHHKYNPNIELLTG 489 CELVGGD + HEHLPLTDRP+PKP TV H +NPNIELL Sbjct: 93 CELVGGDRSKAMAAASALHLMHAASFTHEHLPLTDRPKPKPKPKPTVDHPFNPNIELLIP 152 Query: 490 DGIIPFGLELLARSMDLAQNNQDKILRVIIEITRATGSQGVVDGQYQELGIDEIGSTDYE 669 D ++PF EL A S D Q+ ++LRVI+E+ R GSQG+VD QY+E+ + + + Sbjct: 153 DAMVPFAYELSAVSDDPTQDTSGRVLRVIVELARVMGSQGIVDAQYREVLVSPLDGRELN 212 Query: 670 IVEYVS---KKKEGELHXXXXXXXXXXXXXXXXXXXKLRNFGLYAGMLRG 810 +E+V ++KEG LH +LR +GLY G+++G Sbjct: 213 DIEWVDDMCRRKEGRLHACAAACGAILGGANEEEVERLRKYGLYVGIMQG 262 >ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citrus clementina] gi|568842242|ref|XP_006475060.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Citrus sinensis] gi|557555607|gb|ESR65621.1| hypothetical protein CICLE_v10008936mg [Citrus clementina] Length = 320 Score = 196 bits (498), Expect = 2e-47 Identities = 113/306 (36%), Positives = 158/306 (51%), Gaps = 19/306 (6%) Frame = +1 Query: 82 SHLNAKTNLFPKSSTNLSRFTPRAMAAA-------QNQSYWVSIEADVETYLKKAIPIRS 240 S LN ++ P+ + + + R M +N+SYW S+ D+ +L++A+ ++ Sbjct: 6 SVLNLPAHVAPRRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKE 65 Query: 241 PESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPL 420 P V+EPM H FAAP APALCVAACELVGG +IHE+LPL Sbjct: 66 PVEVYEPMRHFVFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPL 125 Query: 421 TDR----PRPKPTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQDKILRVIIEIT 588 +DR P+ KPT++H + PN ELL D ++PFGLELLA S + A NN +ILRV++E+T Sbjct: 126 SDRTSLIPKSKPTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMT 185 Query: 589 RATGSQGVVDGQYQELGIDEI--------GSTDYEIVEYVSKKKEGELHXXXXXXXXXXX 744 RA GSQGVV+GQY EL + G TD E+ KKKEG LH Sbjct: 186 RAMGSQGVVEGQYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILG 245 Query: 745 XXXXXXXXKLRNFGLYAGMLRGLLGKNNSGIMXXXXXXXXXXXXXXXXSFQGKRTELIAS 924 LR +G Y GM++G++ + SF + E+I S Sbjct: 246 GGSEKEIELLRRYGFYVGMIQGIVSRRLGPTEEIEELKKLAFKLREVNSFNDENAEVIFS 305 Query: 925 LVEPSL 942 LV+ ++ Sbjct: 306 LVDDNI 311 >ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein, chloroplastic [Vitis vinifera] Length = 298 Score = 195 bits (496), Expect = 3e-47 Identities = 115/260 (44%), Positives = 146/260 (56%), Gaps = 11/260 (4%) Frame = +1 Query: 61 MATGISHSHLNAKTNLFPKSSTNLSRFTPRAMAAAQNQSYWVSIEADVETYLKKAIPIRS 240 MAT +H + + +S+ P + AQ SYW SI D++ +L++ I IR Sbjct: 1 MATAFTHINGQNFISTLHRSNHRRPSGGPIRVTMAQKSSYWTSINDDIDAHLRRVIAIRE 60 Query: 241 PESVFEPMHHLTFAAPRTTAPALCVAACELVGGDXXXXXXXXXXXXXXXXXXYIHEHLPL 420 P SVF+PMHHLTFAAP TTAPALC+AACELVGG Y HEH+PL Sbjct: 61 PFSVFKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPL 120 Query: 421 TDRPRPK--PTVHHKYNPNIELLTGDGIIPFGLELLARSMDLAQNNQ--DKILRVIIEIT 588 TD+PR P + PNIELLTGDG+IPFGLELLA+S +L +++ D+IL+VIIE+T Sbjct: 121 TDQPRANSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELT 180 Query: 589 RATGSQGVVDGQYQELGIDE-------IGSTDYEIVEYVSKKKEGELHXXXXXXXXXXXX 747 R GSQGVV+GQY + DE GST V+ KK ELH Sbjct: 181 RTIGSQGVVNGQYIQAQCDESSPSVGKAGST-----RIVTDKKGTELHACGAACGAILGG 235 Query: 748 XXXXXXXKLRNFGLYAGMLR 807 KLR +G YAG ++ Sbjct: 236 GKEKEIEKLRKYGFYAGTIQ 255