BLASTX nr result

ID: Rehmannia24_contig00012205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00012205
         (636 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230612.1| PREDICTED: transcription factor bHLH143-like...    66   1e-08
ref|XP_006351742.1| PREDICTED: transcription factor bHLH143-like...    61   2e-07
gb|EPS71311.1| hypothetical protein M569_03457 [Genlisea aurea]        60   7e-07
ref|XP_004252805.1| PREDICTED: transcription factor bHLH145-like...    57   3e-06
ref|NP_001119403.1| conserved peptide upstream open reading fram...    57   4e-06
gb|EPS71309.1| hypothetical protein M569_03455 [Genlisea aurea]        56   1e-05

>ref|XP_004230612.1| PREDICTED: transcription factor bHLH143-like [Solanum lycopersicum]
          Length = 362

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 50/146 (34%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
 Frame = -2

Query: 407 MVTAKESQTSQQLSARNSPNLAQMAPV-QLDQNYGLPYFSVAFQGQPNSDLCGLNTGRP- 234
           MVT  E Q  QQ  A  SPNL     + Q   + G+P             +C  N   P 
Sbjct: 1   MVTTSELQYYQQDPAWTSPNLNYATTLLQPGHHLGVPSLYTPA-------ICAANAVSPR 53

Query: 233 ---------NAFGECFKLPPPYWNTSPNGNLYSKDSQFALPKRLGVSDKPIDASCAPQKR 81
                    N+   C        N  P  N+YS D++  LP  +G    P DAS  PQKR
Sbjct: 54  RSCFIPCLPNSMEACHNGVNWRPNLVPTKNVYSSDTKCFLPHLIGFKSPPTDASTNPQKR 113

Query: 80  FLIFDRSGNHTRLFFSPSFSPQNRVI 3
           FLI D+SGN TR FFS     ++ +I
Sbjct: 114 FLICDQSGNQTRFFFSQGRPAEDEII 139


>ref|XP_006351742.1| PREDICTED: transcription factor bHLH143-like [Solanum tuberosum]
          Length = 362

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
 Frame = -2

Query: 407 MVTAKESQTSQQLSARNSPNLAQMAPV-QLDQNYGLPYFSVAFQGQPNSDLCGLNTGRP- 234
           MVT  + Q  QQ  A  SPNL     + Q + + G+P             +C  N   P 
Sbjct: 1   MVTTSKLQYYQQDPAWTSPNLNYATTLLQPEHHLGVPSLYTPA-------ICAANAVSPR 53

Query: 233 -NAFGECFKLPPPY------W--NTSPNGNLYSKDSQFALPKRLGVSDKPIDASCAPQKR 81
            ++F  C             W  N  P  N Y  D++  LP  +G    P DAS + QKR
Sbjct: 54  RSSFVPCLPNSKDARHNGVNWLPNLVPTKNEYPSDTKRFLPHLIGFKSPPTDASTSSQKR 113

Query: 80  FLIFDRSGNHTRLFFSPSFSPQNRVI 3
           FLI D+SGN TR FFS     +N +I
Sbjct: 114 FLICDQSGNQTRFFFSQGRPAENEII 139


>gb|EPS71311.1| hypothetical protein M569_03457 [Genlisea aurea]
          Length = 320

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 51/140 (36%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
 Frame = -2

Query: 407 MVTAKESQTSQQLSARNSPNLAQMAPVQLDQNYGLPYF----SVAFQGQPNSDLCGLNTG 240
           M T +ES+TS Q SA N      +  +Q+ Q+  L +F    S A  G P      +N  
Sbjct: 1   MFTDQESKTSVQFSAANCSYPDHLMHLQVKQDGDLRFFRPPVSAANCGLPWIFNPDMNGE 60

Query: 239 RPNAFGECFKLPPPYWNTSPNGNLYSKDSQFALPKRLGV-SDKPIDASCAPQKRFLIFDR 63
           +    G   +LP     + P  NL   +SQ +L   LG+   KP       +KRF+IFDR
Sbjct: 61  KVFVSGGPLELP-----SHPAENLCLPNSQLSLDDNLGLLQTKPFPGL---EKRFIIFDR 112

Query: 62  SGNHTRLFFSPSFSPQNRVI 3
           SG  TRLFFSP  SP N  +
Sbjct: 113 SGVQTRLFFSPLLSPINNYV 132


>ref|XP_004252805.1| PREDICTED: transcription factor bHLH145-like [Solanum lycopersicum]
          Length = 416

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -3

Query: 634 IVRVIACFQPLQNCQAEYFRQLLKPVT 554
           IVRVIACFQPLQ+CQAEYFRQLLKPVT
Sbjct: 27  IVRVIACFQPLQDCQAEYFRQLLKPVT 53


>ref|NP_001119403.1| conserved peptide upstream open reading frame 37 [Arabidopsis
           thaliana] gi|332008501|gb|AED95884.1| conserved peptide
           upstream open reading frame 37 [Arabidopsis thaliana]
          Length = 51

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = -3

Query: 634 IVRVIACFQPLQNCQAEYFRQLLKPVT 554
           +VRVIACFQPLQ+CQAEYFRQLLKPVT
Sbjct: 25  VVRVIACFQPLQDCQAEYFRQLLKPVT 51


>gb|EPS71309.1| hypothetical protein M569_03455 [Genlisea aurea]
          Length = 53

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = -3

Query: 634 IVRVIACFQPLQNCQAEYFRQLLKPVT 554
           +V+++ACFQP+QNCQAEYFRQLLKPVT
Sbjct: 27  VVKILACFQPMQNCQAEYFRQLLKPVT 53


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