BLASTX nr result

ID: Rehmannia24_contig00012110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00012110
         (834 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328664.1| predicted protein [Populus trichocarpa] gi|5...    70   1e-09
ref|XP_003634271.1| PREDICTED: transcription factor TCP5-like [V...    69   2e-09
gb|EMJ11042.1| hypothetical protein PRUPE_ppa014630mg [Prunus pe...    67   8e-09
ref|NP_001234568.1| TCP transcription factor 6 [Solanum lycopers...    58   5e-06

>ref|XP_002328664.1| predicted protein [Populus trichocarpa]
           gi|566206309|ref|XP_006374413.1| hypothetical protein
           POPTR_0015s06980g [Populus trichocarpa]
           gi|550322175|gb|ERP52210.1| hypothetical protein
           POPTR_0015s06980g [Populus trichocarpa]
          Length = 377

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 80/274 (29%), Positives = 110/274 (40%), Gaps = 67/274 (24%)
 Frame = +3

Query: 3   LLDSTKDEIDKLPPLPMLPPNFTQLIHQPTLPSFES------------------------ 110
           LLD+TK++IDKLPPL M PP F Q  HQP L S +S                        
Sbjct: 101 LLDATKNDIDKLPPLQM-PPGFGQF-HQPMLFSHQSNIASPFFDPNSTFIKDVGFHSLGI 158

Query: 111 ---------------SSNYYP---YAKD--------SGLINAITKEG--IKMNDDDQEGF 206
                          SSN  P   Y++D        S  ++ I ++G  IK N+D + G 
Sbjct: 159 KIGTSTAGLDGQVQNSSNTMPKSSYSRDIEASIRAKSKQVDTINEKGKWIKTNEDGEIGS 218

Query: 207 ----GGFVAQNLFPLXXXXXXXXXXXXXXXXX---HFDPPSLSLSQFGGGFPFSNQTEHQ 365
               G   AQN FPL                    H+D  +LSLS   GG  F +QTE+ 
Sbjct: 219 YSTTGQVPAQNFFPLANHSSLPSLLYNPTVPFNSNHWDASNLSLSTQFGGHGFLSQTENS 278

Query: 366 DQISQNNPSTSHHQLYFCPSATNIPSLFPNFP---NNSYINPSILENEWRSXXXXXXXXX 536
                + P +S  QL+FCP    +P LFP++P        N S   N ++          
Sbjct: 279 LDTPSSLPLSSGSQLFFCPPPP-MPPLFPSYPPCVTTPSENESRDMNHFQLLSSSSSQHI 337

Query: 537 XXXXXXXXXXXKSFSLNVN-----SKSGNDTDKD 623
                      K FSLN+N     S++ N+++ D
Sbjct: 338 LPISLTMSSTTKPFSLNLNPGLLRSQNNNESNPD 371


>ref|XP_003634271.1| PREDICTED: transcription factor TCP5-like [Vitis vinifera]
          Length = 383

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 72/230 (31%), Positives = 99/230 (43%), Gaps = 68/230 (29%)
 Frame = +3

Query: 3   LLDSTKDEIDKLPPLPMLPPNFTQLIHQPTLPSFE---SSSNYYPY-------AKDSGLI 152
           LLD+TK EIDKLPPL +   N  Q  HQ  L S E     S+  P+        K++G  
Sbjct: 97  LLDATKHEIDKLPPLQIPQGNLGQF-HQSMLVSHELGAGQSSAVPFFDATPTFLKEAGSH 155

Query: 153 N-AITKEGIKMND---------------------------------------------DD 194
           + +  KEGIK+N+                                             ++
Sbjct: 156 SFSAIKEGIKINNNVDEEDQTIISRPKYWDNDALRAKSKEVVREAISDKTKWFRINEQEN 215

Query: 195 QEGFGGFV----AQNLFPLXXXXXXXXXXXXXXXXX---HFDPPSLSLSQFGG-GFPFSN 350
           Q+G GG+     AQNLFP+                    H++P SLSLSQFG  GFP  +
Sbjct: 216 QDGIGGYSSQVSAQNLFPMTNHSSLPGLLNNSMPYNSFGHWEPSSLSLSQFGSHGFPSQS 275

Query: 351 QTEHQDQISQNNPS----TSHHQLYFCPSATNIPSLFPNFPNNSYINPSI 488
           +  H + ++   PS    +S  QL+FCP+AT  P LFP  P +SYI   +
Sbjct: 276 EVSH-NNVAVPLPSPLALSSGSQLFFCPNATT-PPLFP--PYSSYITTQV 321


>gb|EMJ11042.1| hypothetical protein PRUPE_ppa014630mg [Prunus persica]
          Length = 381

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 67/212 (31%), Positives = 90/212 (42%), Gaps = 48/212 (22%)
 Frame = +3

Query: 3   LLDSTKDEIDKLPPLPMLPPNFTQLIHQPTL-------------------PSFESSSNY- 122
           LLD T+D+IDKLPPL  +P  F    HQ  L                   P F+ +S++ 
Sbjct: 107 LLDVTEDDIDKLPPL-QVPHGFAHQFHQQMLNPHHSHDQGHQSNNSLAAAPFFDVNSSFM 165

Query: 123 ----YPYAKDSGLINAITKEG------IKMNDDDQE-------GFGGFVAQNLFPLXXXX 251
                 + + S   N   ++G       + +DDDQ        G G  +AQ LFP     
Sbjct: 166 EADHQAHQRSSTTTNVGDRKGKSIKTHDEQDDDDQNHHQDGNIGGGQLLAQKLFPQGNHP 225

Query: 252 XXXXXXXXXXXXXHF-----DPPSLSLSQFGG-GFPFSNQTEHQDQISQNNPS-----TS 398
                        ++     +P SLSLSQFGG GFP   Q +H   +  N  S      S
Sbjct: 226 SSIPGLLNNAMAYNYYHNYSEPSSLSLSQFGGHGFPPVPQIDHHSHMMSNALSFSTSMPS 285

Query: 399 HHQLYFCPSATNIPSLFPNFPNNSYINPSILE 494
             QL+FCPS T  PSLF  +P   YI   ++E
Sbjct: 286 GSQLFFCPS-TATPSLFGPYP--PYITNPVVE 314


>ref|NP_001234568.1| TCP transcription factor 6 [Solanum lycopersicum]
           gi|306416823|gb|ADM87255.1| TCP transcription factor 6
           [Solanum lycopersicum]
          Length = 278

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 55/173 (31%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
 Frame = +3

Query: 3   LLDSTKDEIDKLPPLPMLPPNFTQLIHQPTLPSFESSSNYYPYAKDSGLINAITKEGIKM 182
           L+D+TKDEIDKLPPL + PP+ +          F +  ++     D+GL     K+    
Sbjct: 105 LIDATKDEIDKLPPLQIPPPSLSHF--------FSTKDHHNLDFVDTGLFG---KDRWIA 153

Query: 183 NDDDQEGFGGFVAQNLFPLXXXXXXXXXXXXXXXXXHFDPPS-LSLSQFGGGFPFSNQTE 359
             +DQE     + Q+                      ++P S LSL  FG          
Sbjct: 154 TTNDQESSNHLIFQS----------SNLGMLNTFSNSWEPNSNLSLGPFG---------N 194

Query: 360 HQDQISQNN-----PSTSHH---QLYFCP---SATNIPSLFPNFPNNSYINPS 485
           +QDQ  Q       PS+SHH   QLYFCP   S T + SL P  P NS+ +P+
Sbjct: 195 YQDQYQQQQNMPLIPSSSHHQQQQLYFCPTSSSTTTLSSLVP--PYNSHFHPN 245


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