BLASTX nr result
ID: Rehmannia24_contig00011332
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00011332
(799 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356284.1| PREDICTED: zinc finger CCCH domain-containin... 72 2e-10
emb|CBI19970.3| unnamed protein product [Vitis vinifera] 70 1e-09
ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267... 70 1e-09
emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera] 70 1e-09
ref|XP_004237735.1| PREDICTED: zinc finger CCCH domain-containin... 67 6e-09
ref|XP_004237737.1| PREDICTED: zinc finger CCCH domain-containin... 66 1e-08
gb|EOX92488.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 66 2e-08
gb|EOX92487.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 66 2e-08
gb|EPS64430.1| hypothetical protein M569_10354, partial [Genlise... 62 3e-07
gb|EXB40990.1| Zinc finger CCCH domain-containing protein 38 [Mo... 59 3e-06
ref|XP_002307020.2| hypothetical protein POPTR_0005s06240g [Popu... 58 4e-06
ref|XP_006464626.1| PREDICTED: zinc finger CCCH domain-containin... 57 6e-06
ref|XP_006464625.1| PREDICTED: zinc finger CCCH domain-containin... 57 6e-06
ref|XP_006464624.1| PREDICTED: zinc finger CCCH domain-containin... 57 6e-06
ref|XP_002310510.2| hypothetical protein POPTR_0007s03970g [Popu... 57 1e-05
>ref|XP_006356284.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
isoform X1 [Solanum tuberosum]
gi|565379758|ref|XP_006356285.1| PREDICTED: zinc finger
CCCH domain-containing protein 55-like isoform X2
[Solanum tuberosum]
Length = 853
Score = 72.0 bits (175), Expect = 2e-10
Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = -1
Query: 169 RSRSPV--DVRQSYGRSDRRSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISHRDG 5
RSRSP R Y DRR+G SSQ+C++F+AG CRRGS CRF HPD SHRDG
Sbjct: 147 RSRSPPHSSKRDPYASGDRRTGLHISSQVCRNFAAGNCRRGSDCRFVHPDAASHRDG 203
>emb|CBI19970.3| unnamed protein product [Vitis vinifera]
Length = 994
Score = 69.7 bits (169), Expect = 1e-09
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Frame = -1
Query: 187 KAKDHTRSRSP-VDV-RQSYGRSDR-RSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNIS 17
+++ + SRSP VD R SYG S+R R+G SSQ C+DF AGRC RGSQCRF H DN++
Sbjct: 279 RSRSRSLSRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLN 338
Query: 16 HRDG 5
+RDG
Sbjct: 339 YRDG 342
>ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
Length = 913
Score = 69.7 bits (169), Expect = 1e-09
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Frame = -1
Query: 187 KAKDHTRSRSP-VDV-RQSYGRSDR-RSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNIS 17
+++ + SRSP VD R SYG S+R R+G SSQ C+DF AGRC RGSQCRF H DN++
Sbjct: 154 RSRSRSLSRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLN 213
Query: 16 HRDG 5
+RDG
Sbjct: 214 YRDG 217
>emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
Length = 913
Score = 69.7 bits (169), Expect = 1e-09
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Frame = -1
Query: 187 KAKDHTRSRSP-VDV-RQSYGRSDR-RSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNIS 17
+++ + SRSP VD R SYG S+R R+G SSQ C+DF AGRC RGSQCRF H DN++
Sbjct: 154 RSRSRSLSRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLN 213
Query: 16 HRDG 5
+RDG
Sbjct: 214 YRDG 217
>ref|XP_004237735.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Solanum lycopersicum]
Length = 837
Score = 67.4 bits (163), Expect = 6e-09
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = -1
Query: 169 RSRSPVDV-RQSYGRSDRRSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISHRDG 5
RSRSP + R Y +DRR+G S++C++F+ G CRRGSQC FFHPD HRDG
Sbjct: 134 RSRSPHNSKRDPYASADRRTGLHMYSKVCRNFAVGNCRRGSQCWFFHPDAAIHRDG 189
>ref|XP_004237737.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
[Solanum lycopersicum]
Length = 600
Score = 66.2 bits (160), Expect = 1e-08
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -1
Query: 169 RSRSPVDV-RQSYGRSDRRSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISHRD 8
RSRSP + R Y DRR+ SSQ+C++F+AG CRRGS CRF H D+ SHRD
Sbjct: 149 RSRSPHNTKRDPYASGDRRASLHISSQVCRNFAAGNCRRGSDCRFIHLDSASHRD 203
>gb|EOX92488.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
2 [Theobroma cacao]
Length = 967
Score = 65.9 bits (159), Expect = 2e-08
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = -1
Query: 187 KAKDHTRSRSPV-DVRQSYGRSDR-RSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISH 14
+++ +RSRSPV +R+ G +R RS S+QICK+F AGRCRRGSQC+F H D SH
Sbjct: 152 RSRSRSRSRSPVRGIRRQSGFHERTRSRSGVSTQICKEFMAGRCRRGSQCQFLHQDIQSH 211
Query: 13 RDG 5
DG
Sbjct: 212 EDG 214
>gb|EOX92487.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
1 [Theobroma cacao]
Length = 946
Score = 65.9 bits (159), Expect = 2e-08
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = -1
Query: 187 KAKDHTRSRSPV-DVRQSYGRSDR-RSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISH 14
+++ +RSRSPV +R+ G +R RS S+QICK+F AGRCRRGSQC+F H D SH
Sbjct: 171 RSRSRSRSRSPVRGIRRQSGFHERTRSRSGVSTQICKEFMAGRCRRGSQCQFLHQDIQSH 230
Query: 13 RDG 5
DG
Sbjct: 231 EDG 233
>gb|EPS64430.1| hypothetical protein M569_10354, partial [Genlisea aurea]
Length = 73
Score = 61.6 bits (148), Expect = 3e-07
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = -2
Query: 717 MGERRKRKSSWDMEEDTKHLSGMSEHNSWFGKDHRSSHGSGHYHEVSEPRISATRKSKDH 538
MG+RR+RKSSWD+ ED + H+ W GKD SH ++HE S R KS+D
Sbjct: 1 MGDRRERKSSWDVSEDNR-------HSPWTGKDRNYSHDGRNHHEFSSSRSYGATKSRD- 52
Query: 537 SEWPPWESIEENPIAPMNSSF 475
+ WES+ E + NS+F
Sbjct: 53 GQQSYWESLVEEAGSLNNSTF 73
>gb|EXB40990.1| Zinc finger CCCH domain-containing protein 38 [Morus notabilis]
Length = 954
Score = 58.5 bits (140), Expect = 3e-06
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = -1
Query: 187 KAKDHTRSRSPV-DVRQSYGRSDR-RSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISH 14
++K RSRSPV +R+ G DR RS SSQ+CKDF AGRCRRG+ C F H N +
Sbjct: 157 RSKSRGRSRSPVRSLRRESGFPDRSRSRSGVSSQLCKDFIAGRCRRGNHCMFLHEGNEDY 216
Query: 13 RD 8
D
Sbjct: 217 DD 218
>ref|XP_002307020.2| hypothetical protein POPTR_0005s06240g [Populus trichocarpa]
gi|550338234|gb|EEE94016.2| hypothetical protein
POPTR_0005s06240g [Populus trichocarpa]
Length = 858
Score = 57.8 bits (138), Expect = 4e-06
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Frame = -1
Query: 187 KAKDHTRSRSPVDV--RQS--YGRSDRRSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNI 20
+++ +RSRSPV R+S Y R+ RSG S+Q+CKDF AGRCRRGS C+F H D
Sbjct: 130 RSRSQSRSRSPVYGFGRESGAYDRTRSRSGV--SAQLCKDFVAGRCRRGSHCQFLHQDTE 187
Query: 19 SHRD 8
++ D
Sbjct: 188 TYED 191
>ref|XP_006464626.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
isoform X3 [Citrus sinensis]
Length = 870
Score = 57.4 bits (137), Expect = 6e-06
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 187 KAKDHTRSRSPV-DVRQSYGRSDRRSG-PEKSSQICKDFSAGRCRRGSQCRFFHPDNISH 14
+++ RSRSPV ++R+ G R G P S+Q+CKDF+AG+CRRGS C F H + S+
Sbjct: 177 RSRSWNRSRSPVRELRRESGVYGRNRGRPGVSAQLCKDFAAGKCRRGSHCHFSHHSSQSY 236
Query: 13 RD 8
D
Sbjct: 237 ED 238
>ref|XP_006464625.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
isoform X2 [Citrus sinensis]
Length = 887
Score = 57.4 bits (137), Expect = 6e-06
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 187 KAKDHTRSRSPV-DVRQSYGRSDRRSG-PEKSSQICKDFSAGRCRRGSQCRFFHPDNISH 14
+++ RSRSPV ++R+ G R G P S+Q+CKDF+AG+CRRGS C F H + S+
Sbjct: 154 RSRSWNRSRSPVRELRRESGVYGRNRGRPGVSAQLCKDFAAGKCRRGSHCHFSHHSSQSY 213
Query: 13 RD 8
D
Sbjct: 214 ED 215
>ref|XP_006464624.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
isoform X1 [Citrus sinensis]
Length = 910
Score = 57.4 bits (137), Expect = 6e-06
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 187 KAKDHTRSRSPV-DVRQSYGRSDRRSG-PEKSSQICKDFSAGRCRRGSQCRFFHPDNISH 14
+++ RSRSPV ++R+ G R G P S+Q+CKDF+AG+CRRGS C F H + S+
Sbjct: 177 RSRSWNRSRSPVRELRRESGVYGRNRGRPGVSAQLCKDFAAGKCRRGSHCHFSHHSSQSY 236
Query: 13 RD 8
D
Sbjct: 237 ED 238
>ref|XP_002310510.2| hypothetical protein POPTR_0007s03970g [Populus trichocarpa]
gi|566179504|ref|XP_006380374.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|566179506|ref|XP_006380375.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|550334088|gb|EEE90960.2| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|550334089|gb|ERP58171.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|550334090|gb|ERP58172.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
Length = 860
Score = 56.6 bits (135), Expect = 1e-05
Identities = 28/60 (46%), Positives = 36/60 (60%)
Frame = -1
Query: 187 KAKDHTRSRSPVDVRQSYGRSDRRSGPEKSSQICKDFSAGRCRRGSQCRFFHPDNISHRD 8
+++ +RSRSPV +G RS S+Q+CKDF AGRCRRGS C F H D + D
Sbjct: 136 QSRSRSRSRSPV---HGFGHERTRSISSVSAQLCKDFVAGRCRRGSHCPFLHQDTQTCED 192