BLASTX nr result
ID: Rehmannia24_contig00011166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00011166
(774 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS65691.1| hypothetical protein M569_09085, partial [Genlise... 373 e-101
ref|XP_006348328.1| PREDICTED: 50S ribosomal protein L13, chloro... 369 e-100
ref|XP_004244291.1| PREDICTED: 50S ribosomal protein L13, chloro... 364 2e-98
ref|XP_004251925.1| PREDICTED: 50S ribosomal protein L13, chloro... 355 7e-96
ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloro... 355 9e-96
emb|CBI20115.3| unnamed protein product [Vitis vinifera] 354 2e-95
ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloro... 354 2e-95
ref|XP_006389968.1| hypothetical protein EUTSA_v10019066mg [Eutr... 353 5e-95
ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata] g... 352 6e-95
ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana... 350 2e-94
ref|XP_006300547.1| hypothetical protein CARUB_v10020869mg [Caps... 347 3e-93
ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus... 336 6e-90
ref|XP_006478137.1| PREDICTED: 50S ribosomal protein L13, chloro... 335 1e-89
ref|XP_006441472.1| hypothetical protein CICLE_v10021899mg [Citr... 334 2e-89
gb|EMJ13090.1| hypothetical protein PRUPE_ppa010274mg [Prunus pe... 332 7e-89
gb|EOY13479.1| Ribosomal protein L13 family protein [Theobroma c... 332 9e-89
ref|XP_006370075.1| hypothetical protein POPTR_0001s39310g [Popu... 331 1e-88
gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides] 331 2e-88
ref|XP_002316846.2| hypothetical protein POPTR_0011s10720g [Popu... 330 3e-88
gb|EXB54084.1| 50S ribosomal protein L13 [Morus notabilis] 329 7e-88
>gb|EPS65691.1| hypothetical protein M569_09085, partial [Genlisea aurea]
Length = 229
Score = 373 bits (958), Expect = e-101
Identities = 180/227 (79%), Positives = 197/227 (86%)
Frame = +3
Query: 3 VNCATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSIQLNRVSKICCQEKTALVPAG 182
VNCA SSL+ PS S+ + TP LG S + + + RVS ICCQ+K LVPAG
Sbjct: 3 VNCAPSSLMAAGPSRNTLSSIGRMTPSLGCSFATSLNTAPRSPRVSMICCQDKEVLVPAG 62
Query: 183 QQWMFDDITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRGKNLAT 362
Q+WMFD++ GPDVWNKTWYPKAADHINT+KPWY+VDATDKILGRLASTIAIHIRGK+LAT
Sbjct: 63 QEWMFDNLDGPDVWNKTWYPKAADHINTNKPWYVVDATDKILGRLASTIAIHIRGKDLAT 122
Query: 363 YTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEH 542
YTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQ RIPERI+EH
Sbjct: 123 YTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQSRIPERIVEH 182
Query: 543 AVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
AVRGMLPKGRLGRSLF HLKVY GP+HPHEAQKP +LPIRDKRIQK+
Sbjct: 183 AVRGMLPKGRLGRSLFNHLKVYAGPEHPHEAQKPKQLPIRDKRIQKE 229
>ref|XP_006348328.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
tuberosum]
Length = 234
Score = 369 bits (947), Expect = e-100
Identities = 184/233 (78%), Positives = 204/233 (87%), Gaps = 6/233 (2%)
Frame = +3
Query: 3 VNCATSSLLLTKPSN-KPSSTSLKKTPFLGFSLPAASKPSI---QLNRVSKICCQEKTAL 170
V C++SS++ S K S+S KT FLGFS+ +SKPSI + +R ++ICCQEKTAL
Sbjct: 3 VQCSSSSVIFASHSPAKTFSSSPNKTLFLGFSI--SSKPSIVVAKTHRATQICCQEKTAL 60
Query: 171 VPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIR 344
VP Q+WMF+D I GPD+WN+TWYPK ADH+NTDKPWYIVDATDKILGRLASTIAIHIR
Sbjct: 61 VPLEQRWMFEDSEINGPDIWNETWYPKGADHVNTDKPWYIVDATDKILGRLASTIAIHIR 120
Query: 345 GKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIP 524
GKNLATYTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQLQ+RIP
Sbjct: 121 GKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIP 180
Query: 525 ERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
ERI+EHAVRGMLPKGRLGR LF HLKVY GPDHPH+AQKP+ELPIRDKRIQKQ
Sbjct: 181 ERILEHAVRGMLPKGRLGRQLFNHLKVYEGPDHPHDAQKPIELPIRDKRIQKQ 233
>ref|XP_004244291.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
lycopersicum]
Length = 233
Score = 364 bits (934), Expect = 2e-98
Identities = 179/232 (77%), Positives = 202/232 (87%), Gaps = 5/232 (2%)
Frame = +3
Query: 3 VNCATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSI---QLNRVSKICCQEKTALV 173
V C++S + + K S+S KT FLGFS+ +SKPS+ + +R ++I CQEKTALV
Sbjct: 3 VQCSSSVIFASHSPAKTLSSSQNKTLFLGFSI--SSKPSVVVAKTHRATQISCQEKTALV 60
Query: 174 PAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRG 347
P Q+WMF++ I GPD+WN+TWYPK ADH+NTDKPWYIVDATDKILGRLASTIAIHIRG
Sbjct: 61 PLEQRWMFEESEINGPDIWNETWYPKGADHVNTDKPWYIVDATDKILGRLASTIAIHIRG 120
Query: 348 KNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPE 527
KNLATYTPSVDMGAFVIVVNAEKVAVSGKKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPE
Sbjct: 121 KNLATYTPSVDMGAFVIVVNAEKVAVSGKKRSQKLYRRHSGRPGGMTVETFDQLQQRIPE 180
Query: 528 RIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
RI+EHAVRGMLPKGRLGR LF HLKVY GPDHPH+AQKP+ELPIRDKRIQKQ
Sbjct: 181 RILEHAVRGMLPKGRLGRQLFNHLKVYEGPDHPHDAQKPIELPIRDKRIQKQ 232
>ref|XP_004251925.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like isoform 1
[Solanum lycopersicum]
Length = 229
Score = 355 bits (912), Expect = 7e-96
Identities = 175/224 (78%), Positives = 195/224 (87%), Gaps = 3/224 (1%)
Frame = +3
Query: 21 SLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSIQ-LNRVSKICCQEKTALVPAGQQWMF 197
SL+ T PS K S KTPFLGFS+ A S + NR ++I CQ+K A +P Q+WMF
Sbjct: 8 SLMFTCPSPKSLSN---KTPFLGFSMAAPSSLTFSGNNRTAQIRCQDKAAYIPLDQRWMF 64
Query: 198 DD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRGKNLATYTP 371
++ I GPD+WN+TWYPKAADH+NTDKPWYI+DA+DKILGR+ASTIAIH+RGKNLATYTP
Sbjct: 65 EESEIDGPDIWNETWYPKAADHVNTDKPWYIIDASDKILGRMASTIAIHMRGKNLATYTP 124
Query: 372 SVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVR 551
SVDMGAFVIVVNAEKV VSGKKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVR
Sbjct: 125 SVDMGAFVIVVNAEKVVVSGKKRSQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVR 184
Query: 552 GMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
GMLPKGRLGR LFTHLKVY GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 185 GMLPKGRLGRQLFTHLKVYKGPEHPHEAQKPVELPIRDKRIQKQ 228
>ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
tuberosum]
Length = 229
Score = 355 bits (911), Expect = 9e-96
Identities = 176/224 (78%), Positives = 196/224 (87%), Gaps = 3/224 (1%)
Frame = +3
Query: 21 SLLLTKPSNKPSSTSLKKTPFLGFSLPAASK-PSIQLNRVSKICCQEKTALVPAGQQWMF 197
SL+LT PS K S KTPFLG S+ A S P + NR S+I Q+K A +P Q+WMF
Sbjct: 8 SLMLTCPSPKSLSN---KTPFLGLSMVAPSSLPLSRNNRTSRIGYQDKAAYIPLDQRWMF 64
Query: 198 DD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRGKNLATYTP 371
++ I GPD+WN+TWYPKAADH+NTDKPWYI+DA+DKILGR+ASTIAIH+RGKNLATYTP
Sbjct: 65 EESEIDGPDIWNETWYPKAADHVNTDKPWYIIDASDKILGRMASTIAIHMRGKNLATYTP 124
Query: 372 SVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEHAVR 551
SVDMGAFVIV+NAEKVAVSGKKR+QKLYRRHSGRPGGMTVETFDQLQ+RIPERIIEHAVR
Sbjct: 125 SVDMGAFVIVINAEKVAVSGKKRSQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVR 184
Query: 552 GMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
GMLPKGRLGR LFTHLKVY GP+HPHEAQKPVELPIRDKRIQKQ
Sbjct: 185 GMLPKGRLGRQLFTHLKVYKGPEHPHEAQKPVELPIRDKRIQKQ 228
>emb|CBI20115.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 354 bits (908), Expect = 2e-95
Identities = 178/233 (76%), Positives = 204/233 (87%), Gaps = 6/233 (2%)
Frame = +3
Query: 3 VNCATSSLLLTKPSN--KPSSTSLKKT-PFLGFSLPAAS-KPSIQLNRVSKICCQEKTAL 170
+ A+SS++L PS KPS SLKKT PFLGFS+ AA+ KPS + ++ CQ+K A+
Sbjct: 142 ITFASSSVMLPSPSPSPKPSFGSLKKTTPFLGFSISAANPKPSFP-RQSFRVNCQDKAAV 200
Query: 171 VPAGQQWMFD--DITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIR 344
VP Q+WMF+ +++GPD+WNKTWYPKAADHINT+K WYIVDATDKILGRLASTIAI+IR
Sbjct: 201 VPLDQRWMFEQSEVSGPDIWNKTWYPKAADHINTEKTWYIVDATDKILGRLASTIAIYIR 260
Query: 345 GKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIP 524
GKNLATYTPSVDMG+FVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM VETFDQLQ+RIP
Sbjct: 261 GKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP 320
Query: 525 ERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
ERI+EHAVRGMLPKGRLGR+LF HLKVY GP HPHEAQKP++LPIRDKRIQK+
Sbjct: 321 ERIVEHAVRGMLPKGRLGRALFNHLKVYKGPHHPHEAQKPIDLPIRDKRIQKE 373
>ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Vitis
vinifera]
Length = 235
Score = 354 bits (908), Expect = 2e-95
Identities = 178/233 (76%), Positives = 204/233 (87%), Gaps = 6/233 (2%)
Frame = +3
Query: 3 VNCATSSLLLTKPSN--KPSSTSLKKT-PFLGFSLPAAS-KPSIQLNRVSKICCQEKTAL 170
+ A+SS++L PS KPS SLKKT PFLGFS+ AA+ KPS + ++ CQ+K A+
Sbjct: 3 ITFASSSVMLPSPSPSPKPSFGSLKKTTPFLGFSISAANPKPSFP-RQSFRVNCQDKAAV 61
Query: 171 VPAGQQWMFD--DITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIR 344
VP Q+WMF+ +++GPD+WNKTWYPKAADHINT+K WYIVDATDKILGRLASTIAI+IR
Sbjct: 62 VPLDQRWMFEQSEVSGPDIWNKTWYPKAADHINTEKTWYIVDATDKILGRLASTIAIYIR 121
Query: 345 GKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIP 524
GKNLATYTPSVDMG+FVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM VETFDQLQ+RIP
Sbjct: 122 GKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIP 181
Query: 525 ERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
ERI+EHAVRGMLPKGRLGR+LF HLKVY GP HPHEAQKP++LPIRDKRIQK+
Sbjct: 182 ERIVEHAVRGMLPKGRLGRALFNHLKVYKGPHHPHEAQKPIDLPIRDKRIQKE 234
>ref|XP_006389968.1| hypothetical protein EUTSA_v10019066mg [Eutrema salsugineum]
gi|557086402|gb|ESQ27254.1| hypothetical protein
EUTSA_v10019066mg [Eutrema salsugineum]
Length = 240
Score = 353 bits (905), Expect = 5e-95
Identities = 176/238 (73%), Positives = 202/238 (84%), Gaps = 11/238 (4%)
Frame = +3
Query: 3 VNCATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSIQLN------RVSKICC---Q 155
V C++S+++L S KPS + +K+PFLGFSL A SKPS+++ R ++ C Q
Sbjct: 3 VLCSSSTVILPSSSVKPSGSD-RKSPFLGFSLTAISKPSVRVGIYANAKRGLQVKCEAEQ 61
Query: 156 EKTALVPAGQQWMFD--DITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTI 329
T+LVPA Q+WMFD + GPD+WN TWYPKA+DH+NTDKPW++VDATDKILGRLASTI
Sbjct: 62 ATTSLVPANQRWMFDQEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLASTI 121
Query: 330 AIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQL 509
A HIRGKNLA+YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQL
Sbjct: 122 ANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQL 181
Query: 510 QKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
Q+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKP++LPIRDKRIQ Q
Sbjct: 182 QQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQ 239
>ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata]
gi|297333589|gb|EFH64007.1| EMB1473 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 352 bits (904), Expect = 6e-95
Identities = 175/240 (72%), Positives = 203/240 (84%), Gaps = 13/240 (5%)
Frame = +3
Query: 3 VNCATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSIQLN------RVSKICCQE-- 158
V C++S+++L S KPS + +K+PFLGFSL A SKPS+++ R ++ C+
Sbjct: 3 VLCSSSTVILPSSSVKPSGSE-RKSPFLGFSLTAFSKPSVRVGIYANSKRGLQVKCEAEE 61
Query: 159 ---KTALVPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLAS 323
KT+LVPA Q+WMFD+ GPD+WN TWYPKA+DH+NTDKPW++VDATDKILGRLAS
Sbjct: 62 TTTKTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLAS 121
Query: 324 TIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFD 503
TIA HIRGKNLA+YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFD
Sbjct: 122 TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD 181
Query: 504 QLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
QLQ+RIPERI+EHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKP++LPIRDKRIQ Q
Sbjct: 182 QLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQ 241
>ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana]
gi|75314103|sp|Q9SYL9.1|RK13_ARATH RecName: Full=50S
ribosomal protein L13, chloroplastic; AltName:
Full=CL13; AltName: Full=Protein EMBRYO DEFECTIVE 1473;
Flags: Precursor gi|4836870|gb|AAD30573.1|AC007260_4 50S
Ribosomal protein L13 [Arabidopsis thaliana]
gi|13878111|gb|AAK44133.1|AF370318_1 putative ribosomal
protein L13 [Arabidopsis thaliana]
gi|7572938|emb|CAA60775.1| ribosomal protein L13
[Arabidopsis thaliana] gi|17104781|gb|AAL34279.1|
putative ribosomal protein L13 [Arabidopsis thaliana]
gi|332198009|gb|AEE36130.1| 50S ribosomal protein L13
[Arabidopsis thaliana]
Length = 241
Score = 350 bits (899), Expect = 2e-94
Identities = 175/239 (73%), Positives = 204/239 (85%), Gaps = 12/239 (5%)
Frame = +3
Query: 3 VNCATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSIQLN------RVSKICCQEK- 161
V C++S+++L+ S K SS S +K+PFLGFSL A SKPS+++ R ++ C+ +
Sbjct: 3 VLCSSSTVILSSSSVK-SSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCEAEP 61
Query: 162 ---TALVPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLAST 326
T+LVPA Q+WMFD+ GPD+WN TWYPKA+DH+NTDKPW++VDATDKILGRLAST
Sbjct: 62 TTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLAST 121
Query: 327 IAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQ 506
IA HIRGKNLA+YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQ
Sbjct: 122 IANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQ 181
Query: 507 LQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
LQ+RIPERI+EHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKP++LPIRDKRIQ Q
Sbjct: 182 LQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQ 240
>ref|XP_006300547.1| hypothetical protein CARUB_v10020869mg [Capsella rubella]
gi|482569257|gb|EOA33445.1| hypothetical protein
CARUB_v10020869mg [Capsella rubella]
Length = 242
Score = 347 bits (890), Expect = 3e-93
Identities = 172/239 (71%), Positives = 201/239 (84%), Gaps = 12/239 (5%)
Frame = +3
Query: 3 VNCATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPSIQLN------RVSKICCQEK- 161
V C++S+++L S+ S S +++PFLGFSL A S+PS ++ R ++ C+ +
Sbjct: 3 VLCSSSTVILPSSSSVKPSGSDRRSPFLGFSLTAISRPSARVGIYANAKRGLQVKCEAEQ 62
Query: 162 ---TALVPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLAST 326
T+LVPA Q+WMFD+ GPD+WN TWYPKA+DH+NTDKPW++VDATDKILGRLAST
Sbjct: 63 TTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLAST 122
Query: 327 IAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQ 506
IA HIRGKNLA+YTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGMTVETFDQ
Sbjct: 123 IANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQ 182
Query: 507 LQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
LQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKP++LPIRDKRIQ Q
Sbjct: 183 LQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQ 241
>ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus communis]
gi|223528200|gb|EEF30260.1| 50S ribosomal protein L13,
putative [Ricinus communis]
Length = 245
Score = 336 bits (861), Expect = 6e-90
Identities = 170/241 (70%), Positives = 194/241 (80%), Gaps = 16/241 (6%)
Frame = +3
Query: 9 CATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAA---SKPSIQLNRVSKICCQEKTAL--- 170
CA SS+ L+ S+ S+ S + P+ F ++ SKPS++ + S C + T L
Sbjct: 5 CAPSSITLSSSSSSSSTASTTQRPYTTFIAGSSLLKSKPSVRTS-FSASCSRSFTVLSEK 63
Query: 171 --------VPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLA 320
VP Q+WMF++ + GPD+WNKTWYPKAADH+NT+KPWY+VDATDKILGRLA
Sbjct: 64 TDKKVVPHVPVDQRWMFEEFELNGPDIWNKTWYPKAADHVNTEKPWYVVDATDKILGRLA 123
Query: 321 STIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETF 500
STIAI+IRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM VETF
Sbjct: 124 STIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETF 183
Query: 501 DQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQK 680
DQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKP+ELPIRDKRIQ
Sbjct: 184 DQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPIELPIRDKRIQI 243
Query: 681 Q 683
Q
Sbjct: 244 Q 244
>ref|XP_006478137.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like isoform X1
[Citrus sinensis]
Length = 244
Score = 335 bits (858), Expect = 1e-89
Identities = 165/227 (72%), Positives = 188/227 (82%), Gaps = 3/227 (1%)
Frame = +3
Query: 12 ATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPS-IQLNRVSKICCQEKTALVPAGQQ 188
++SS K N ++ S TPFLGFS+ +A S + R K+ C + +LVP Q+
Sbjct: 17 SSSSSSSFKTLNTGTTISSSTTPFLGFSVASAKSTSPLNTKRSFKVRCCQNLSLVPDNQR 76
Query: 189 WMFD--DITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRGKNLAT 362
WMF+ ++ GPD+WN TWYPKAADH ++DK WY+VDATDKILGRLASTIAIHIRGKNLAT
Sbjct: 77 WMFEQSEVNGPDIWNNTWYPKAADHRHSDKTWYVVDATDKILGRLASTIAIHIRGKNLAT 136
Query: 363 YTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEH 542
YTPSVDMGA+VIVVNAEKVAVSGKKRTQK+YRRHSGRPGGM ETFDQLQ RIPERIIEH
Sbjct: 137 YTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEH 196
Query: 543 AVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
AVRGMLPKGRLGR LFTHLKVY GP+HPHEAQ+P+ELPIRDKRIQKQ
Sbjct: 197 AVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPIELPIRDKRIQKQ 243
>ref|XP_006441472.1| hypothetical protein CICLE_v10021899mg [Citrus clementina]
gi|557543734|gb|ESR54712.1| hypothetical protein
CICLE_v10021899mg [Citrus clementina]
Length = 245
Score = 334 bits (856), Expect = 2e-89
Identities = 165/227 (72%), Positives = 188/227 (82%), Gaps = 3/227 (1%)
Frame = +3
Query: 12 ATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKPS-IQLNRVSKICCQEKTALVPAGQQ 188
++SS K N ++ S TPFLGFS+ +A S + R K+ C + +LVP Q+
Sbjct: 18 SSSSSSSFKTLNTGTTISSSITPFLGFSVASAKSTSPLNTKRSFKVRCCQNLSLVPDNQR 77
Query: 189 WMFD--DITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRGKNLAT 362
WMF+ ++ GPD+WN TWYPKAADH ++DK WY+VDATDKILGRLASTIAIHIRGKNLAT
Sbjct: 78 WMFEQSEVNGPDIWNNTWYPKAADHRHSDKTWYVVDATDKILGRLASTIAIHIRGKNLAT 137
Query: 363 YTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPERIIEH 542
YTPSVDMGA+VIVVNAEKVAVSGKKRTQK+YRRHSGRPGGM ETFDQLQ RIPERIIEH
Sbjct: 138 YTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEH 197
Query: 543 AVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
AVRGMLPKGRLGR LFTHLKVY GP+HPHEAQ+P+ELPIRDKRIQKQ
Sbjct: 198 AVRGMLPKGRLGRELFTHLKVYKGPNHPHEAQQPIELPIRDKRIQKQ 244
>gb|EMJ13090.1| hypothetical protein PRUPE_ppa010274mg [Prunus persica]
Length = 256
Score = 332 bits (852), Expect = 7e-89
Identities = 167/231 (72%), Positives = 186/231 (80%), Gaps = 14/231 (6%)
Frame = +3
Query: 33 TKPSNKPSSTSLKKTPFLGFSLPAASKPSIQLN------------RVSKICCQEKTALVP 176
TKP SS ++ KTPF+G S K + R ++ ++ A VP
Sbjct: 25 TKPPFSSSSKNVIKTPFVGLSAAPPQKLWLPTTTNLGFDNGSNPRRSFEVFSTKEIARVP 84
Query: 177 AGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAIHIRGK 350
Q+WMF+D + GPD+WN TWYPKAADH+NT+KPWYIVDATDKILGR+ASTIAI+IRGK
Sbjct: 85 LDQRWMFEDDEVGGPDIWNNTWYPKAADHVNTEKPWYIVDATDKILGRMASTIAIYIRGK 144
Query: 351 NLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQKRIPER 530
NLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQ+RIPER
Sbjct: 145 NLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIPER 204
Query: 531 IIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
IIEHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKPVELPI+DKRIQ Q
Sbjct: 205 IIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIKDKRIQIQ 255
>gb|EOY13479.1| Ribosomal protein L13 family protein [Theobroma cacao]
Length = 246
Score = 332 bits (851), Expect = 9e-89
Identities = 172/245 (70%), Positives = 199/245 (81%), Gaps = 19/245 (7%)
Frame = +3
Query: 3 VNCATSSLLLTKPSN---KPSSTSLKKT------PFLGF-SLPAASKPS-IQLNRVS--- 140
V CA++S +++ S+ + S SL+KT PFLGF + A SKPS ++ +S
Sbjct: 3 VLCASTSAIVSSSSSVSERHSFGSLRKTIPSNQSPFLGFFPVVALSKPSSVRTTTLSFSK 62
Query: 141 ---KICCQEKTALVPAGQQWMFDDIT--GPDVWNKTWYPKAADHINTDKPWYIVDATDKI 305
++CCQ+ +LV ++WMFD+ GPD+WN TWYPKA DH+NT KPWYIVDATDKI
Sbjct: 63 RDFRVCCQD-LSLVAENERWMFDESEAGGPDIWNNTWYPKAKDHVNTKKPWYIVDATDKI 121
Query: 306 LGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM 485
LGRLASTIA+HIRGKNL TYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM
Sbjct: 122 LGRLASTIAVHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM 181
Query: 486 TVETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRD 665
VETF+QLQ+RIPERI+EHAVRGMLPKGRLGR+LF HLKVY GPDHPHEAQKP+ELPIRD
Sbjct: 182 KVETFNQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPIELPIRD 241
Query: 666 KRIQK 680
KRIQK
Sbjct: 242 KRIQK 246
>ref|XP_006370075.1| hypothetical protein POPTR_0001s39310g [Populus trichocarpa]
gi|550349254|gb|ERP66644.1| hypothetical protein
POPTR_0001s39310g [Populus trichocarpa]
Length = 249
Score = 331 bits (849), Expect = 1e-88
Identities = 172/244 (70%), Positives = 197/244 (80%), Gaps = 19/244 (7%)
Frame = +3
Query: 9 CATSSLLLTKPSNKPSS---TSLKKTPFL-GFSLPAAS-KPSIQLN--------RVSKIC 149
CA+SS TKPS S+ TS+ TPF+ GFS + KP ++ + R ++
Sbjct: 5 CASSSFTSTKPSCSYSARHGTSICTTPFVAGFSFSQSKLKPCVKTSLFPLNNGSRSVEVR 64
Query: 150 CQEK----TALVPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILG 311
C++K VP Q+W+F++ + GPD+WN TWYPKAADHINT+K WYIVDATDKILG
Sbjct: 65 CEKKEKNVVTRVPLDQRWLFEESELNGPDIWNTTWYPKAADHINTEKTWYIVDATDKILG 124
Query: 312 RLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTV 491
RLASTIAI+IRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTV
Sbjct: 125 RLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTV 184
Query: 492 ETFDQLQKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKR 671
ETFDQLQ+RIPERIIEHAVRGMLPKGRLGR+LF HLKVYTGP HPHEAQKP++LPIRDKR
Sbjct: 185 ETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYTGPTHPHEAQKPIDLPIRDKR 244
Query: 672 IQKQ 683
IQ +
Sbjct: 245 IQME 248
>gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 241
Score = 331 bits (848), Expect = 2e-88
Identities = 171/236 (72%), Positives = 193/236 (81%), Gaps = 11/236 (4%)
Frame = +3
Query: 9 CATSSLLL-TKPSNKPSS---TSLKKTPFL-GFSLPAASKPSIQLNRVSKICCQEK---- 161
CA+SS TKPS+ S+ TS+ +PF+ GFS + R ++ C++K
Sbjct: 5 CASSSFTTSTKPSSSYSTKNGTSISPSPFVVGFSFSQSWFSLSNSRRGFEVRCEKKDKSV 64
Query: 162 TALVPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAI 335
VP Q+W+F++ I GPD+WN TWYPKAADHINT+K WYIVDATDKILGRLASTIAI
Sbjct: 65 VTRVPLDQRWLFEESEINGPDIWNTTWYPKAADHINTEKTWYIVDATDKILGRLASTIAI 124
Query: 336 HIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQK 515
+IRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQ+
Sbjct: 125 YIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQ 184
Query: 516 RIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
RIPERIIEHAVRGMLPKGRLGR+LF HLKVYTGP HPHEAQKP+ELPIRDKRIQ +
Sbjct: 185 RIPERIIEHAVRGMLPKGRLGRALFNHLKVYTGPTHPHEAQKPIELPIRDKRIQME 240
>ref|XP_002316846.2| hypothetical protein POPTR_0011s10720g [Populus trichocarpa]
gi|550328124|gb|EEE97458.2| hypothetical protein
POPTR_0011s10720g [Populus trichocarpa]
Length = 241
Score = 330 bits (846), Expect = 3e-88
Identities = 171/236 (72%), Positives = 193/236 (81%), Gaps = 11/236 (4%)
Frame = +3
Query: 9 CATSSLLL-TKPSNKPSS---TSLKKTPFL-GFSLPAASKPSIQLNRVSKICCQEK---- 161
CA+SS TKPS+ S+ TS+ +PF+ GFS + R ++ C++K
Sbjct: 5 CASSSFTTSTKPSSSYSTKNGTSISPSPFVVGFSFSQSWFSLSNSRRGFEVRCEKKDKSV 64
Query: 162 TALVPAGQQWMFDD--ITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTIAI 335
VP Q+W+F++ I GPD+WN TWYPKAADHINT+K WYIVDATDKILGRLASTIAI
Sbjct: 65 ATRVPLDQRWLFEESEINGPDIWNTTWYPKAADHINTEKTWYIVDATDKILGRLASTIAI 124
Query: 336 HIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQK 515
+IRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQ+
Sbjct: 125 YIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQ 184
Query: 516 RIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
RIPERIIEHAVRGMLPKGRLGR+LF HLKVYTGP HPHEAQKP+ELPIRDKRIQ +
Sbjct: 185 RIPERIIEHAVRGMLPKGRLGRALFNHLKVYTGPTHPHEAQKPMELPIRDKRIQME 240
>gb|EXB54084.1| 50S ribosomal protein L13 [Morus notabilis]
Length = 251
Score = 329 bits (843), Expect = 7e-88
Identities = 167/238 (70%), Positives = 190/238 (79%), Gaps = 14/238 (5%)
Frame = +3
Query: 12 ATSSLLLTKPSNKPSSTSLKKTPFLGFSLPAASKP-----SIQLNRVSK-------ICCQ 155
++SSL + S+ S + KTPFLGFS+ + +P +++ N K + C
Sbjct: 14 SSSSLTSSSSSSSRPSINACKTPFLGFSVALSKRPWVPPTTLRFNGSEKHGKRGLTVRCV 73
Query: 156 EKTALVPAGQQWMFD--DITGPDVWNKTWYPKAADHINTDKPWYIVDATDKILGRLASTI 329
+ VP Q+W+F+ ++ GPD+WNKTWYPKAADHI T KPWYIVDATDKILGRLASTI
Sbjct: 74 DAPH-VPVDQRWLFEQSEVNGPDIWNKTWYPKAADHIPTQKPWYIVDATDKILGRLASTI 132
Query: 330 AIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQL 509
AIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM VETFDQL
Sbjct: 133 AIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQL 192
Query: 510 QKRIPERIIEHAVRGMLPKGRLGRSLFTHLKVYTGPDHPHEAQKPVELPIRDKRIQKQ 683
Q+RIPERIIEHAVRGMLPKGRLGR+LF HLKVY GPDHPH AQKP LPIRDKRI++Q
Sbjct: 193 QQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHTAQKPANLPIRDKRIERQ 250