BLASTX nr result

ID: Rehmannia24_contig00010903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00010903
         (2063 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99341.1| unknown [Silene latifolia]                              60   4e-06
dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   8e-06

>gb|AAY99341.1| unknown [Silene latifolia]
          Length = 555

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = -2

Query: 1390 DHF-FLDDYEIVIPGPEDKMDKPPARCLAFHVASLEAGLRFPLSDHVENILMGLDVCPAQ 1214
            DH+ F   Y+IVIP     +  PP  C+  ++  LE GLRFPL+ +V  I+  ++V  AQ
Sbjct: 111  DHYSFGRGYKIVIPKEGQAVCCPPKGCIGVYIRHLEYGLRFPLNAYVVAIIKAMNVAVAQ 170

Query: 1213 LVPNSFRHIIGFIIIMRFFNMDPSLVHFWSLYSMSSS 1103
            L P + R IIGF+ +  F    P++  F  L+ +  S
Sbjct: 171  LHPLAIRTIIGFVWLCLFKGEAPTVNLFRRLHHLRPS 207


>dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score = 58.9 bits (141), Expect = 8e-06
 Identities = 28/85 (32%), Positives = 46/85 (54%)
 Frame = -2

Query: 1327 PPARCLAFHVASLEAGLRFPLSDHVENILMGLDVCPAQLVPNSFRHIIGFIIIMRFFNMD 1148
            PP   +  +  SLEAG+R PL     ++L    + PAQL PN +R + GF+ +  +  + 
Sbjct: 73   PPPGAICVYARSLEAGMRLPLQGFFSDVLAHFGIAPAQLTPNGWRAMAGFLALCDYAGVP 132

Query: 1147 PSLVHFWSLYSMSSSNKTVEVGFFV 1073
            PSL  F   + M S ++  E G+++
Sbjct: 133  PSLAVFRRFFVMCSLSQEHEKGWYL 157


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