BLASTX nr result

ID: Rehmannia24_contig00010741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00010741
         (327 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275144.1| cystathionine gamma-synthase isoform 2 [Sola...    57   2e-06
gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 ...    57   3e-06
ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycope...    56   4e-06

>ref|NP_001275144.1| cystathionine gamma-synthase isoform 2 [Solanum tuberosum]
           gi|8439543|gb|AAF74982.1|AF082892_1 cystathionine
           gamma-synthase isoform 2 [Solanum tuberosum]
          Length = 540

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
 Frame = +3

Query: 150 MAMSSCARAFTSFECRSDPDFSG--PK--IPSAGCGKFSGKAKPPSHRGAAAGHGLSSLI 317
           MA+ S ARAF SF+CRSDPDFSG  P+  +P+AG  +FS K K  S RG++  HG+SSLI
Sbjct: 1   MAVPSSARAFPSFQCRSDPDFSGGVPRHDLPNAGV-RFSVKVKSLS-RGSSV-HGMSSLI 57

Query: 318 LKF 326
           L+F
Sbjct: 58  LRF 60


>gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 [Solanum tuberosum]
          Length = 539

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +3

Query: 150 MAMSSCARAFTSFECRSDPDFSGP-KIPSAGCGKFSGKAKPPSHRGAAAGHGLSSLILKF 326
           MA+SS ARAF SFECRS+PDFSG    P AG  +FSGK    S+R     +GLSSLI +F
Sbjct: 1   MAVSSYARAFPSFECRSEPDFSGSLPHPKAGV-RFSGKYNSGSNRSQV--YGLSSLIFRF 57


>ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycopersicum]
           gi|40806079|gb|AAR92031.1| cystathionine gamma synthase
           [Solanum lycopersicum]
          Length = 540

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +3

Query: 150 MAMSSCARAFTSFECRSDPDFSGP-KIPSAGCGKFSGKAKPPSHRGAAAGHGLSSLILKF 326
           MA+SS ARAF SFECRS+PDFSG    P AG  +FSGK    S+R     +GLSSLI +F
Sbjct: 1   MAVSSYARAFPSFECRSEPDFSGSLPHPKAGV-RFSGKYNSGSNRSQV--YGLSSLIYRF 57


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