BLASTX nr result

ID: Rehmannia24_contig00010564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00010564
         (605 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292...    84   3e-14
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    83   5e-14
ref|XP_006836497.1| hypothetical protein AMTR_s00108p00123240 [A...    77   4e-12
gb|EPS61484.1| hypothetical protein M569_13313 [Genlisea aurea]        58   2e-06
ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293...    58   2e-06

>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
           subsp. vesca]
          Length = 851

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
 Frame = +1

Query: 1   NVLKALCHKHKPSILAICEPKVDISTISDSYWQSLGLTLAGQSFRVNGRPDIWVLHD-ST 177
           N  K     H   IL I EP V + +I  S+W++LG+   G + R + +P++WV    S 
Sbjct: 18  NAFKEFVRSHSLEILCIAEPFVALESIPASFWRNLGMQFIGANDRGSQQPNLWVFCKISL 77

Query: 178 ITILNQVWSSTQCIVFHVQFGSLIFHVGFTHGLCDYIARR----EXXXXXXXXXXXXXXX 345
           +  +  ++SS Q +   V F S    V   +     + RR    +               
Sbjct: 78  VPWVRVLYSSDQQVSLQVMFDSTNCFVTAVYARTTVVGRRKLWEDITDVKGRFVNGPWLV 137

Query: 346 VGDFNAVLGHHERSRNETLSQASCQDFRDFIEDANLFAIPTTGNSFTWCSPRRPLSLLQA 525
            GDFNAVLG HE+     +  +SC++F+   +   L  + T G  FTW   R     ++ 
Sbjct: 138 FGDFNAVLGMHEKKGGGPVCMSSCEEFQVMSDVCELVHVVTKGAEFTWVRRRGLRGNVEL 197

Query: 526 KLDRALATCPFFALW 570
           +LD +LA+  +   W
Sbjct: 198 RLDCSLASLEWLDAW 212


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
 Frame = +1

Query: 7   LKALCHKHKPSILAICEPKVDISTISDSYWQSLGLTLAGQSFRVNGR----PDIWVLHDS 174
           LK   + HKP ++ + EP +   ++   YW S+G++     + VNGR    P++W L   
Sbjct: 20  LKNFFNCHKPLLIFVAEPMIAFESVPPWYWDSIGVS----KYCVNGREILQPNLWALWGR 75

Query: 175 TITILNQVWSSTQCIVFHVQFGSLIFHVGFTHGLCDYIARREXXXXXXXXXXXXXXX--- 345
            ++ +  ++ S QCI   +       +V   +    Y+ RR+                  
Sbjct: 76  EVSAI-VMFISDQCIALEISCHQSTVYVAAVYASTFYLKRRQLWAELTNLQGCFQGPWLF 134

Query: 346 VGDFNAVLGHHERSRNETLSQASCQDFRDFIEDANLFAIPTTGNSFTWCSPRRPLSLLQA 525
           +GDFNAVLG HE+ R       SC DF ++     L  +PT G  +TW + R     +  
Sbjct: 135 IGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHLPTLGAFYTWSNGRLGSDNVAL 194

Query: 526 KLDRALATCPFFALWK 573
           +LDRA+    +   W+
Sbjct: 195 RLDRAICNEEWVNFWR 210


>ref|XP_006836497.1| hypothetical protein AMTR_s00108p00123240 [Amborella trichopoda]
           gi|548839029|gb|ERM99350.1| hypothetical protein
           AMTR_s00108p00123240 [Amborella trichopoda]
          Length = 523

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
 Frame = +1

Query: 7   LKALCHKHKPSILAICEPKVDISTISDSYWQSLGLTL-AGQSFRVNGRPDIWVLHDSTIT 183
           L  + H  KP I+ + EPK     +  S+ +S+G T+   Q+ R   +P++W+L  + I 
Sbjct: 215 LSDIVHSVKPEIIDVDEPKKFFGDLPISFLKSIGYTVDVIQNSRNISKPNLWILWKADIP 274

Query: 184 ILNQVWSSTQ-----CIVFHVQFGSLIFHVGFTHGLCDYIARREXXXXXXXXXXXXXXX- 345
             N + +S Q     C+ +       + H G T        RRE                
Sbjct: 275 KPNLLSTSDQQVTISCVAYAKYVVITVGHAGHTCA-----KRRELWLQFAAVAPNGPWCL 329

Query: 346 VGDFNAVLGHHERSRNETLSQASCQDFRDFIEDANLFAIPTTGNSFTWCSPRRPLSLLQA 525
           VGDFNA+L  +E+S     +Q S ++F   +  +NL A+P+TG  FT  + +    L+ A
Sbjct: 330 VGDFNAILFSYEKSGCGPSNQRSMEEFAAMVSTSNLIAVPSTGFKFTQSNNQSASRLVCA 389

Query: 526 KLDRALATCPFFALWKEVKGLVLPR 600
           KLDRA A   +F  + +     LPR
Sbjct: 390 KLDRAFANDAWFEEFSKCATKALPR 414


>gb|EPS61484.1| hypothetical protein M569_13313 [Genlisea aurea]
          Length = 793

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/75 (41%), Positives = 43/75 (57%)
 Frame = +1

Query: 346 VGDFNAVLGHHERSRNETLSQASCQDFRDFIEDANLFAIPTTGNSFTWCSPRRPLSLLQA 525
           VGDFN VL  HE S   +      +DFR  + D  L  IP  G+SFTW + R+    ++A
Sbjct: 556 VGDFNEVLFPHEFSSRVSRHPRQMEDFRKAVVDCGLNEIPFQGHSFTWTNKRKHPHTVRA 615

Query: 526 KLDRALATCPFFALW 570
           +LDRALA+  +  L+
Sbjct: 616 RLDRALASVNWLQLY 630


>ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293221 [Fragaria vesca
           subsp. vesca]
          Length = 461

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 46/86 (53%)
 Frame = +1

Query: 346 VGDFNAVLGHHERSRNETLSQASCQDFRDFIEDANLFAIPTTGNSFTWCSPRRPLSLLQA 525
           +GDFN+VLG HE+S     S+ SC +F++  +  +   + T G  FTW +       ++ 
Sbjct: 3   IGDFNSVLGAHEKSGGPPPSRISCLEFQNMSDACDFVHLDTVGARFTWTNGCGTRVHVEL 62

Query: 526 KLDRALATCPFFALWKEVKGLVLPRI 603
           +LDR L +  +F  W     + LPR+
Sbjct: 63  RLDRFLCSTSWFEAWPYSSCIALPRV 88


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