BLASTX nr result
ID: Rehmannia24_contig00010478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00010478
(1094 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 226 1e-99
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 219 7e-99
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 217 7e-99
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 224 1e-97
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 208 5e-97
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 210 1e-94
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 205 4e-94
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 216 4e-94
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 208 5e-94
gb|AAP54937.2| retrotransposon protein, putative, unclassified [... 211 4e-93
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 212 4e-93
gb|ACB28472.1| polyprotein [Ananas comosus] 192 5e-93
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 207 2e-92
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 209 2e-92
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 209 2e-92
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 201 3e-92
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 207 8e-92
gb|AAP68381.1| putative polyprotein [Oryza sativa Japonica Group... 201 3e-91
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly... 197 5e-91
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g... 212 5e-91
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 226 bits (575), Expect(2) = 1e-99
Identities = 112/221 (50%), Positives = 154/221 (69%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDV 181
+ II+TDQQ+LK++ DQKV IQH+ + +LL +Y I+YKKG ENKVADALSR+ +S V
Sbjct: 795 QLIIRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRRGNS-V 853
Query: 182 LCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGN 361
+ S+A P W++ V +SY D +++ ++ PNA + + G++RYKGR+ VG
Sbjct: 854 MAISIAV--PSWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGK 911
Query: 362 DKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDN 541
D LR I+ ++H S+ GGHSG TY R+K +FYWP MK+++ +V C VC +K ++
Sbjct: 912 DPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEH 971
Query: 542 GPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLL+PLPIP AWTHISMDFIEGLP S+GK VI VVV
Sbjct: 972 CHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVV 1012
Score = 166 bits (419), Expect(2) = 1e-99
Identities = 72/115 (62%), Positives = 91/115 (79%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
RFTKYAH + L+HP++ VAQ F+D+I+KLHG PI+IV+DR +IFTS W ELFK ++V
Sbjct: 1014 RFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKV 1073
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHT 1011
L ++AYHPQ+DGQTER+NQC+E+YLRCM PKKW WL LAE WYNT +HT
Sbjct: 1074 QLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHT 1128
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 219 bits (559), Expect(2) = 7e-99
Identities = 106/220 (48%), Positives = 149/220 (67%), Gaps = 1/220 (0%)
Frame = +2
Query: 8 IIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVD-SDVL 184
IIKTDQQ+LK+++ Q+++ IQH+ + KL+ +Y I+YK G EN VADALSR + +
Sbjct: 1068 IIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVADALSRSPNLKEEQ 1127
Query: 185 CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGND 364
C + V P+WVQ + SY++D F KIL+ D + + + +E GL++YKGR+ VG
Sbjct: 1128 CLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGLLKYKGRIYVGET 1187
Query: 365 KNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNG 544
+R L+L H+S FGGHSGI TY R+K++FYWP +K+ V + C C + K ++
Sbjct: 1188 TEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHI 1247
Query: 545 PYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
PGLL PL +P AWTHI+MDFIEGLP S+GK+VILVVV
Sbjct: 1248 HIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVV 1287
Score = 169 bits (428), Expect(2) = 7e-99
Identities = 74/117 (63%), Positives = 96/117 (82%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R TKYAHFLAL+HP+T +V Q+F+D+I+KLHG P+ IVTDR ++FTS+F+ E+FK +V
Sbjct: 1289 RLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKV 1348
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L ++A+HPQ+DGQTER+NQCLE+YLR MT P+KW WLALAE WYNT YHT+I
Sbjct: 1349 KLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSI 1405
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 217 bits (553), Expect(2) = 7e-99
Identities = 104/225 (46%), Positives = 152/225 (67%), Gaps = 4/225 (1%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSR----KV 169
+ +IKTDQQ+LKY+++Q+++ IQH+ + KL+ NY I+YK G EN VADALSR K
Sbjct: 407 ELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVADALSRSPKNKE 466
Query: 170 DSDVLCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRV 349
+ LC ++A V P+W+ + SY++D K+L+ + ++ E G+++YKGR+
Sbjct: 467 EVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIMKYKGRI 526
Query: 350 GVGNDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMN 529
VG +RG ++ HSS+FGGH GI TY R+K++FYWP +K+ V + +C VC +
Sbjct: 527 YVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVENHIRNCPVCQVT 586
Query: 530 KPDNGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
K ++ PGLL PL +P AWTHISMDF+EGLP S+GK+VILVVV
Sbjct: 587 KSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVV 631
Score = 171 bits (434), Expect(2) = 7e-99
Identities = 75/117 (64%), Positives = 96/117 (82%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R TKYAHF+AL+HP+T +V QVF+D+I+KLHG PI+IVTDR ++FTS+F+ E+FK +V
Sbjct: 633 RLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKV 692
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L ++AYHPQ+DGQTER+NQCLE+YLRCMT P+ W W+ALAE WYNT YHT I
Sbjct: 693 QLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAI 749
>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 592
Score = 224 bits (572), Expect(2) = 1e-97
Identities = 108/219 (49%), Positives = 155/219 (70%)
Frame = +2
Query: 8 IIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVLC 187
II+TDQQ+LKY+ +Q ++ +QH+ + KLLG NY+++YK+G ENK DALSR +D +
Sbjct: 180 IIRTDQQSLKYMQEQIIIEGVQHKLLVKLLGYNYKVEYKRGRENKATDALSRVRYNDQV- 238
Query: 188 TSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGNDK 367
+++ V+P W+ +V+ SY+ D ++ SI P A +++++ G++RYKGR+ +G++
Sbjct: 239 VAISAVTPVWILEVLASYEGDEKCRDLITQISISPTAQPNYSLKNGILRYKGRLYIGSNT 298
Query: 368 NLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNGP 547
L+ +L T H S+ GGHSG TY RLK +F+WP+MKQ+V V +VC N ++ P
Sbjct: 299 GLKRQLLVTFHDSALGGHSGGRVTYQRLKLIFHWPRMKQEVEEFVKLYDVCQKNNCEHVP 358
Query: 548 YPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQP+PIP AWTHISMDFIEGLP SE K VILVVV
Sbjct: 359 YPGLLQPIPIPEMAWTHISMDFIEGLPKSEDKEVILVVV 397
Score = 160 bits (405), Expect(2) = 1e-97
Identities = 69/126 (54%), Positives = 95/126 (75%)
Frame = +1
Query: 640 KECYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFW 819
KE + RFTKY+HF+AL+HPFT V +VF+D+++K HG P I+T+R +FTS W
Sbjct: 390 KEVILVVVDRFTKYSHFIALSHPFTVQHVVKVFVDNVFKHHGLPSVIITNRDMVFTSHLW 449
Query: 820 TELFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNT 999
+LFK L V L L+++YHP++DGQT+R+NQCLE YLRCM NPKKW WL+ AE WY+T
Sbjct: 450 QDLFKTLGVKLRLSTSYHPETDGQTKRVNQCLEGYLRCMVFANPKKWCSWLSTAEWWYDT 509
Query: 1000 NYHTNI 1017
++HT++
Sbjct: 510 SFHTSL 515
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 208 bits (530), Expect(2) = 5e-97
Identities = 103/221 (46%), Positives = 144/221 (65%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDV 181
+FII TD ++L L +Q++ T Q + TKL GL Y+I Y+KG +N ADALSRKV D
Sbjct: 998 EFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADALSRKVQEDS 1057
Query: 182 LCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGN 361
C +++ P W+Q+V+ YDKDP ++LA ++ F++ G++R+K R+ +G
Sbjct: 1058 HCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGG 1117
Query: 362 DKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDN 541
+ L+ +L MH ++ GGHSG TY ++K++FYWP M+ DV+ V SC VC +KPD
Sbjct: 1118 NLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDR 1177
Query: 542 GPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQPL +P QAW IS+DFIEGLP S N ILVVV
Sbjct: 1178 AKYPGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVV 1218
Score = 174 bits (441), Expect(2) = 5e-97
Identities = 73/124 (58%), Positives = 98/124 (79%)
Frame = +1
Query: 646 CYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTE 825
C + +F+KY HFL L HPFTA+KVA+VFLD++YKLHG P++I++DR +IFTSSFW +
Sbjct: 1213 CILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQ 1272
Query: 826 LFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNY 1005
LF++ NL ++S+YHPQSDGQTERLNQCLE +LRC H P +W WL++AE+WYNT
Sbjct: 1273 LFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYNTTV 1332
Query: 1006 HTNI 1017
H+ +
Sbjct: 1333 HSTL 1336
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 210 bits (535), Expect(2) = 1e-94
Identities = 101/221 (45%), Positives = 150/221 (67%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDV 181
+ IIKTDQQ+LK++++Q+++ IQH+ + KL+ +Y I+YK G EN VADALSR ++
Sbjct: 1043 RLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADALSRIPPAEQ 1102
Query: 182 LCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGN 361
C ++ TV P+WV+ + SY+ D KIL+ + + ++ E GL+RYKGR+ VG
Sbjct: 1103 -CQAITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGE 1161
Query: 362 DKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDN 541
+ +R ++ + HSS+FGGHSG+ TY R+K +FYWP +K+ V + C +C + K ++
Sbjct: 1162 NTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEH 1221
Query: 542 GPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
PGLL PL +P AW HI+MDF+EGLP S GK+VILVVV
Sbjct: 1222 IHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVV 1262
Score = 164 bits (416), Expect(2) = 1e-94
Identities = 68/117 (58%), Positives = 95/117 (81%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R TKYAHF+A+ HP+T +V ++F+++I++LHG P++I+TDR +IFTS + E+FK ++V
Sbjct: 1264 RLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKV 1323
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L +++YHPQ+DGQTER+NQCLE+YLR MT P +WH WLALAE WYNT YHT+I
Sbjct: 1324 RLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSI 1380
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 205 bits (521), Expect(2) = 4e-94
Identities = 101/220 (45%), Positives = 147/220 (66%)
Frame = +2
Query: 5 FIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVL 184
FIIKTDQ++LKYLL+Q++ TP+Q +W+ KLL +YEIQY++G EN VADALSR S+VL
Sbjct: 929 FIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYEIQYRQGKENLVADALSRVEGSEVL 988
Query: 185 CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGND 364
+++ V D+++++ +Y+ D I++A P+A K ++ ++R K ++ V ND
Sbjct: 989 HMALSIVECDFLKEIQVAYESDGVLKDIISALQQHPDAKKHYSWSQDILRRKSKIVVPND 1048
Query: 365 KNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNG 544
+ +L +H S GG SG + ++ R+K +FYW M +D+ + SC C K DN
Sbjct: 1049 VEITNKLLQWLHCSGMGGRSGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNA 1108
Query: 545 PYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQPLPIP + W +SMDFIEGLP S GK+VI+VVV
Sbjct: 1109 AYPGLLQPLPIPDKIWCDVSMDFIEGLPNSGGKSVIMVVV 1148
Score = 168 bits (425), Expect(2) = 4e-94
Identities = 75/116 (64%), Positives = 91/116 (78%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R +K AHF+AL HP++A VAQ FLD++YK HG P SIV+DR +FTS FW E FKL V
Sbjct: 1150 RLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGV 1209
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTN 1014
L ++SAYHPQSDGQTE +N+CLENYLRCM H P W+KWL LAE+WYNTNYH++
Sbjct: 1210 ELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSS 1265
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 216 bits (550), Expect(2) = 4e-94
Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDS-- 175
+FII TD +L +L DQ++ TP QH+ TKLLGL+Y I Y+KG+ N ADALSRK
Sbjct: 14 EFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLSYRICYRKGTCNGPADALSRKFQDTE 73
Query: 176 DVLCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGV 355
D LC ++ + W+Q+V Y +DPF T++L +++ K F + GL+R+KGRV +
Sbjct: 74 DELC-HISACTLTWIQEVTDGYKQDPFSTQLLTELAVNATGRKHFTLNSGLIRFKGRVWI 132
Query: 356 GNDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKP 535
G++ L+ +L +HSS GGHSG TY +LK++F WPKMK+ V C++CL KP
Sbjct: 133 GDNPTLQSKLLTELHSSPIGGHSGFPVTYRKLKQLFAWPKMKKMTKTFVQQCQICLQAKP 192
Query: 536 DNGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
D YPGLLQPLP+P AW IS+DFIEGLP S+ N ILVVV
Sbjct: 193 DRARYPGLLQPLPVPEGAWQVISLDFIEGLPRSDHSNCILVVV 235
Score = 157 bits (396), Expect(2) = 4e-94
Identities = 69/124 (55%), Positives = 90/124 (72%)
Frame = +1
Query: 646 CYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTE 825
C + +F+KYAHFL L+HPFTA VA++F+ I+KLHG P+ I++DR K+FTS W
Sbjct: 230 CILVVVDKFSKYAHFLPLSHPFTALSVAKLFMKHIFKLHGLPLVIISDRDKVFTSQLWEH 289
Query: 826 LFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNY 1005
LF+ L +SAYHPQSD QTER+NQCLE YLRC H P KW WL LAE+WYNT++
Sbjct: 290 LFEGAGTKLHFSSAYHPQSDAQTERVNQCLEIYLRCFVHSVPTKWAAWLHLAEYWYNTSF 349
Query: 1006 HTNI 1017
H+++
Sbjct: 350 HSSV 353
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 208 bits (530), Expect(2) = 5e-94
Identities = 104/222 (46%), Positives = 146/222 (65%), Gaps = 1/222 (0%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKV-DSD 178
+FII TD +L +L DQ++ TP QH+ TKLLGL Y+I Y+KGS N ADALSRK DS+
Sbjct: 979 EFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADALSRKFQDSN 1038
Query: 179 VLCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVG 358
++++ P W+ +V Y+KD K+L+ +I P + ++ G++RYK R+ VG
Sbjct: 1039 SEIFAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDNGIIRYKNRIWVG 1098
Query: 359 NDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPD 538
N+ L+ ++ +H+S GGHSG TY ++K++F WP MK+ + V C+VCL KPD
Sbjct: 1099 NNPELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESVQRCQVCLQAKPD 1158
Query: 539 NGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQPLP+P +W +S+DFIEGLP S G N ILVVV
Sbjct: 1159 RLKYPGLLQPLPVPEGSWQAVSLDFIEGLPKSAGYNCILVVV 1200
Score = 164 bits (415), Expect(2) = 5e-94
Identities = 75/126 (59%), Positives = 91/126 (72%)
Frame = +1
Query: 646 CYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTE 825
C + RF+KYAHF+AL HPFTA VAQ ++ IYKLHG P +IV+DR KIFTS W +
Sbjct: 1195 CILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIFTSQLWEQ 1254
Query: 826 LFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNY 1005
LF L +SAYHPQSDGQTER+NQCLE YLRC H P KW+ WL LAE+WYN+ Y
Sbjct: 1255 LFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAEYWYNSTY 1314
Query: 1006 HTNIMT 1023
H+++ T
Sbjct: 1315 HSSLGT 1320
>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1477
Score = 211 bits (538), Expect(2) = 4e-93
Identities = 105/222 (47%), Positives = 148/222 (66%), Gaps = 1/222 (0%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRK-VDSD 178
+F+I TD +L +L DQ++ TP Q + TKLLGL Y I Y+KGS N ADALSRK +
Sbjct: 952 EFMILTDHHSLTHLSDQRLHTPWQQKAFTKLLGLQYRIVYRKGSANSAADALSRKDLGDS 1011
Query: 179 VLCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVG 358
+V++ SP W+Q+VI Y++D F +++LA S++P A + + ++ GL+RYKGR+ VG
Sbjct: 1012 AQILAVSSCSPSWLQEVIQGYEQDKFSSQLLAELSLNPKAREHYTLQQGLIRYKGRIWVG 1071
Query: 359 NDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPD 538
N+ +L+ ++ +H + GGHSG TY R+K +F W MKQ + + C++C KP+
Sbjct: 1072 NNTDLQLKLIKELHDNPAGGHSGFPVTYRRIKHLFAWLGMKQQIQQQLKQCQICQQAKPE 1131
Query: 539 NGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQPLP+P AW ISMDFIEGLP S+ N ILVVV
Sbjct: 1132 RVKYPGLLQPLPVPKGAWQVISMDFIEGLPTSDKYNCILVVV 1173
Score = 158 bits (399), Expect(2) = 4e-93
Identities = 68/124 (54%), Positives = 90/124 (72%)
Frame = +1
Query: 646 CYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTE 825
C + +F+KYAHFL LTHPFTA VA VF+ ++YKLHG P I++DR ++FTS W
Sbjct: 1168 CILVVVDKFSKYAHFLPLTHPFTAFSVATVFMKNVYKLHGMPQVIISDRDRVFTSQLWEH 1227
Query: 826 LFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNY 1005
LF L ++S+YHPQ+DGQTER+N+CLE +LRC H+ P KW WL LAE WYNT+Y
Sbjct: 1228 LFTKSGTKLHMSSSYHPQTDGQTERVNRCLEIFLRCFIHVTPTKWANWLYLAEFWYNTSY 1287
Query: 1006 HTNI 1017
H+++
Sbjct: 1288 HSSV 1291
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 212 bits (540), Expect(2) = 4e-93
Identities = 102/222 (45%), Positives = 146/222 (65%), Gaps = 1/222 (0%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDV 181
+F+I TD +L +L +Q++ TP Q + TKL GL ++I Y+KG N ADALSR V +
Sbjct: 335 EFLIITDHHSLMHLTEQRLHTPWQQKAFTKLSGLQFQIVYRKGKHNAAADALSRHVPEET 394
Query: 182 L-CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVG 358
++T SP W+Q ++H YD+DP +L +++P+++ +++ GL+++KG+V VG
Sbjct: 395 SEFLGISTCSPVWLQDILHGYDQDPLALSLLTGLAVNPSSYPHYSLSKGLIKHKGKVWVG 454
Query: 359 NDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPD 538
N+ N++ I++ +H S GGHSG TY R+K +F WP MK V + SC VCL KPD
Sbjct: 455 NNSNIQQQIISALHDSPLGGHSGFPVTYKRIKSLFSWPHMKLTVQKQLASCAVCLQAKPD 514
Query: 539 NGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQPLP+P AW ISMDFIEGLP S ++ ILVVV
Sbjct: 515 RSKYPGLLQPLPVPDGAWQIISMDFIEGLPKSYHQDCILVVV 556
Score = 157 bits (397), Expect(2) = 4e-93
Identities = 70/124 (56%), Positives = 92/124 (74%)
Frame = +1
Query: 640 KECYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFW 819
++C + +F+KYAHF+ L+HPF+A VA+VF+ ++YKLHG P I++DR KIFTS+ W
Sbjct: 549 QDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRDKIFTSALW 608
Query: 820 TELFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNT 999
+LF L L+SAYHPQSDGQTER+NQCLE +LRC H P KW WL LAE WYN+
Sbjct: 609 EQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHLAEFWYNS 668
Query: 1000 NYHT 1011
+YH+
Sbjct: 669 SYHS 672
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 192 bits (487), Expect(2) = 5e-93
Identities = 101/220 (45%), Positives = 137/220 (62%)
Frame = +2
Query: 5 FIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVL 184
F IKTD Q+LKYL++Q+V TP Q +W+ KL+G +YE+ YKKG EN VADALSR
Sbjct: 586 FKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVADALSRSPT---- 641
Query: 185 CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGND 364
+V+ + D + Q+ S++ D KI+ D N++ + +R KG++ VG+D
Sbjct: 642 LLAVSAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRYTWVQDQLRRKGKLVVGSD 701
Query: 365 KNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNG 544
L+ ++ H+SS GGHSG+ T +LK FYW +++DV V C VC NK +
Sbjct: 702 PGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYETT 761
Query: 545 PYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
GLLQPLPIP WT ISMDFIEGLP S+GK VI+VVV
Sbjct: 762 APAGLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVV 801
Score = 177 bits (449), Expect(2) = 5e-93
Identities = 80/116 (68%), Positives = 97/116 (83%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R +KYAHF+AL+HP+TAS VAQ+FLD+IYKLHG P SIV+DR IF S FW ELFK LQV
Sbjct: 803 RLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQV 862
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTN 1014
++L++AYHPQSDGQTE +N+CLENYLRCM PK+W KWL LAE WYNT+YH++
Sbjct: 863 KVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSYHSS 918
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 207 bits (528), Expect(2) = 2e-92
Identities = 102/224 (45%), Positives = 147/224 (65%), Gaps = 3/224 (1%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDV 181
K IIKTDQQ+LK+++ Q+++ IQH+ + KL+ +Y I+YK G EN VADALSR +
Sbjct: 928 KLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVADALSRLPQKEA 987
Query: 182 L---CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVG 352
+ C + V P+W+ + SY+ D KIL+ + +++ +E GL++YKGR+
Sbjct: 988 VADRCHPMTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEAGLLKYKGRIY 1047
Query: 353 VGNDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNK 532
VG ++R ++ T HSSSFGGHSG+ T+ R+K +FYW M+ +V + C C + K
Sbjct: 1048 VGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITK 1107
Query: 533 PDNGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
++ PGLL PL IP AWTHI+MDFIEGLP S+GK+VILVVV
Sbjct: 1108 SEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVV 1151
Score = 160 bits (404), Expect(2) = 2e-92
Identities = 70/117 (59%), Positives = 91/117 (77%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R TKYAHF+AL HP+ +V + F+++I+KLHG P+ I+TDR +IFTSS + E+FK ++V
Sbjct: 1153 RLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKV 1212
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L ++AYHPQ DGQTER+NQCLE+YLR MT P KW+ WLALAE WYNT +HT I
Sbjct: 1213 KLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAI 1269
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 209 bits (533), Expect(2) = 2e-92
Identities = 102/219 (46%), Positives = 144/219 (65%)
Frame = +2
Query: 8 IIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVLC 187
II+TDQ +LKY+ +Q++ +QH+ + KLL +Y+I+YKKG ENK ADALSR + L
Sbjct: 326 IIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALT 385
Query: 188 TSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGNDK 367
T+V + P W+ +V SY DP ++ + I P + + ++GG++RYK + VG
Sbjct: 386 TTV--IVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGN 443
Query: 368 NLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNGP 547
LR +L + H S+ GGHSG TY R+K++FYWP MK V V +C VC NK ++
Sbjct: 444 TLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNM 503
Query: 548 YPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
GLLQPLP+P AW+HI+MDF+EGLP SEGK+VI V+V
Sbjct: 504 PAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIV 542
Score = 157 bits (398), Expect(2) = 2e-92
Identities = 71/117 (60%), Positives = 88/117 (75%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
RFTKYAHF+ L+HPFTA ++ FL+ YKLHG P IV+DR +IFTSS W E+F+ V
Sbjct: 544 RFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGV 603
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L +SAYHPQ+DGQ+ER+NQCLENYLRCMT P+KW L AE WYNT +HT++
Sbjct: 604 KLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSL 660
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 209 bits (533), Expect(2) = 2e-92
Identities = 102/219 (46%), Positives = 144/219 (65%)
Frame = +2
Query: 8 IIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVLC 187
II+TDQ +LKY+ +Q++ +QH+ + KLL +Y+I+YKKG ENK ADALSR + L
Sbjct: 105 IIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALT 164
Query: 188 TSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGNDK 367
T+V + P W+ +V SY DP ++ + I P + + ++GG++RYK + VG
Sbjct: 165 TTV--IVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGN 222
Query: 368 NLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNGP 547
LR +L + H S+ GGHSG TY R+K++FYWP MK V V +C VC NK ++
Sbjct: 223 TLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNM 282
Query: 548 YPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
GLLQPLP+P AW+HI+MDF+EGLP SEGK+VI V+V
Sbjct: 283 PAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIV 321
Score = 157 bits (398), Expect(2) = 2e-92
Identities = 71/117 (60%), Positives = 88/117 (75%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
RFTKYAHF+ L+HPFTA ++ FL+ YKLHG P IV+DR +IFTSS W E+F+ V
Sbjct: 323 RFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGV 382
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L +SAYHPQ+DGQ+ER+NQCLENYLRCMT P+KW L AE WYNT +HT++
Sbjct: 383 KLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSL 439
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 201 bits (512), Expect(2) = 3e-92
Identities = 103/220 (46%), Positives = 142/220 (64%)
Frame = +2
Query: 5 FIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVL 184
FIIKTDQ++LKYLL+Q++ TPIQ +W+ KLL +YEIQY++G EN VADALSR S+VL
Sbjct: 958 FIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVL 1017
Query: 185 CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGND 364
++ V D ++ + Y D I+ A DP++ K F+ ++R K ++ V +
Sbjct: 1018 HMAMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPAN 1077
Query: 365 KNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNG 544
N++ IL +H S GGHSG + T+ R+K +FYW M +D+ + SC C K D
Sbjct: 1078 DNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPA 1137
Query: 545 PYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
PGLLQPLPIP W+ +SMDFIEGLP+S GK VI+VVV
Sbjct: 1138 ASPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVV 1177
Score = 165 bits (418), Expect(2) = 3e-92
Identities = 74/116 (63%), Positives = 91/116 (78%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
R +K AHF+AL+HP++A VA +LD+++KLHG P SIV+DR +FTS FW E F L V
Sbjct: 1179 RLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGV 1238
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTN 1014
L LTSAYHPQSDGQTE +N+CLE YLRCM H P+ W KWLALAE+WYNTNYH++
Sbjct: 1239 ALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSS 1294
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 207 bits (527), Expect(2) = 8e-92
Identities = 103/219 (47%), Positives = 139/219 (63%)
Frame = +2
Query: 8 IIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVLC 187
II+TDQ +LKY+ +Q++ IQH+ + KLL +Y+I+YKKG ENK ADALSR + S
Sbjct: 770 IIRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKIEYKKGKENKAADALSR-IPSVAQL 828
Query: 188 TSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGNDK 367
S + P W+ +++ SY DP T + + I P + + G++RYK R+ VG
Sbjct: 829 FSTTIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYTLTSGILRYKNRLYVGAGT 888
Query: 368 NLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNGP 547
+LR + + H S+ GGHSG TY R K +FYWP MK+D+ V C VC NK ++
Sbjct: 889 DLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNL 948
Query: 548 YPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
PGLL PLPIP AWTHISMDFIEGLP S+ K+VI V+V
Sbjct: 949 QPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIV 987
Score = 158 bits (399), Expect(2) = 8e-92
Identities = 70/117 (59%), Positives = 89/117 (76%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
RFTKYAHF+AL+HPFTA ++ F+++ YK HG P IV+DR +IFTS W ++F+ V
Sbjct: 989 RFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGV 1048
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNI 1017
L +SAYHPQ+DGQTER+NQCLENYLRCMT PKKW LA A+ WYNT++HT +
Sbjct: 1049 KLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTTL 1105
>gb|AAP68381.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710435|gb|ABF98230.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1118
Score = 201 bits (510), Expect(2) = 3e-91
Identities = 100/222 (45%), Positives = 147/222 (66%), Gaps = 1/222 (0%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDV 181
+FII+TDQ++L +L DQ++ T Q + +TKLLGL Y++ Y+KG EN+ ADALSR ++
Sbjct: 560 EFIIRTDQRSLIHLGDQRLATLWQQKALTKLLGLQYKLVYRKGVENRAADALSRCDSPEI 619
Query: 182 LCTSVATVS-PDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVG 358
L S +V P W+ +V SY P + +L+ + P + F+V G++RYKGR+ +G
Sbjct: 620 LQLSALSVCVPSWLDEVRDSYASHPHTSSLLSQVLLQPESAPHFSVTDGVLRYKGRIWLG 679
Query: 359 NDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPD 538
++ L+ +L +H+++ G HSG+ TY RL+R+F WP +K+ V V SC +C K +
Sbjct: 680 HNVGLQQKVLGALHNAAVGDHSGVQVTYTRLRRLFAWPGLKKSVQLFVDSCSMCKQAKAE 739
Query: 539 NGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YPGLLQPLP+P AW +S+DFIEGLP+S G N ILVVV
Sbjct: 740 RVRYPGLLQPLPVPEHAWQVVSLDFIEGLPLSLGFNCILVVV 781
Score = 162 bits (411), Expect(2) = 3e-91
Identities = 71/126 (56%), Positives = 94/126 (74%)
Frame = +1
Query: 646 CYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTE 825
C + +F++YAHF+AL HPFTA VA ++ ++YKLHG P S+++DR IFTS+ W+E
Sbjct: 776 CILVVVDKFSRYAHFIALAHPFTAFDVALAYMQNVYKLHGLPQSMISDRDCIFTSNLWSE 835
Query: 826 LFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNY 1005
LFKL L ++SAYHPQ+DGQTER+NQCLE +LRC H P+KW +WLALAE WYNT
Sbjct: 836 LFKLTDTQLRMSSAYHPQTDGQTERVNQCLETFLRCFVHACPRKWFRWLALAEFWYNTTP 895
Query: 1006 HTNIMT 1023
H+ + T
Sbjct: 896 HSALGT 901
>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa Japonica
Group]
Length = 921
Score = 197 bits (500), Expect(2) = 5e-91
Identities = 98/220 (44%), Positives = 146/220 (66%)
Frame = +2
Query: 5 FIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVDSDVL 184
FIIKTD ++L +L D+ + T +Q + +TKL+GL Y QYK+G +N VADALSR S
Sbjct: 356 FIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADALSRMPSSSQF 415
Query: 185 CTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVGND 364
C +++ V P W+Q+VI+SY DP ++LA ++ + +++ G++R++ ++ +G++
Sbjct: 416 C-ALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSN 474
Query: 365 KNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPDNG 544
L ++ H+S+ GGHSGI TY ++K++F WP +K DV V C+VC K ++
Sbjct: 475 AGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVKQCQVCQQAKHEHC 534
Query: 545 PYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
PGLL PLPIP +AW ISMDFIEGLP S+G N ILVVV
Sbjct: 535 RLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVV 574
Score = 166 bits (419), Expect(2) = 5e-91
Identities = 74/123 (60%), Positives = 92/123 (74%)
Frame = +1
Query: 667 RFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTELFKLLQV 846
RFTKYA+F+ L HPFTAS+VA + +++K HG P SIV+DR ++FTS FWT LF
Sbjct: 576 RFTKYANFIPLCHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDT 635
Query: 847 NLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNYHTNIMTL 1026
L +++AYHPQ DGQTER+NQCLE YLRCMT NPKKW W+ LAE WYNTNYHT++
Sbjct: 636 QLQMSTAYHPQIDGQTERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTSLGCS 695
Query: 1027 IHR 1035
H+
Sbjct: 696 PHK 698
>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
[Oryza sativa Japonica Group]
Length = 783
Score = 212 bits (539), Expect(2) = 5e-91
Identities = 105/222 (47%), Positives = 148/222 (66%), Gaps = 1/222 (0%)
Frame = +2
Query: 2 KFIIKTDQQALKYLLDQKVMTPIQHRWITKLLGLNYEIQYKKGSENKVADALSRKVD-SD 178
+FII TD +L +L DQ++ TP QH+ TKLLGL Y+I Y+KGS N ADALSRK S+
Sbjct: 164 EFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSTNAAADALSRKPQQSE 223
Query: 179 VLCTSVATVSPDWVQQVIHSYDKDPFFTKILAANSIDPNAFKDFNVEGGLVRYKGRVGVG 358
+++ P W+ +V+ SYD DP T+++AA +++PN+ F+++ G++RYKG + +G
Sbjct: 224 EEFNAISQCVPQWLMEVLQSYDTDPHATQLVAALTLNPNSKPHFSLQHGVLRYKGNIWIG 283
Query: 359 NDKNLRGLILATMHSSSFGGHSGINGTYMRLKRVFYWPKMKQDVIFLVGSCEVCLMNKPD 538
N +L+ I+ MH+S GGHSG TY R+K++F W MK + + +C++C KPD
Sbjct: 284 NSPDLQLKIINEMHASPVGGHSGFPVTYRRIKQLFAWNGMKSQIKETLANCQICAQAKPD 343
Query: 539 NGPYPGLLQPLPIPSQAWTHISMDFIEGLPISEGKNVILVVV 664
YP LLQPLP+P AW IS+DFIEGLP S N ILVVV
Sbjct: 344 RSRYPRLLQPLPVPKGAWQTISLDFIEGLPRSSHYNCILVVV 385
Score = 150 bits (380), Expect(2) = 5e-91
Identities = 68/124 (54%), Positives = 85/124 (68%)
Frame = +1
Query: 646 CYISGCCRFTKYAHFLALTHPFTASKVAQVFLDSIYKLHGHPISIVTDRYKIFTSSFWTE 825
C + +F+KY+HF+ L HPFTA VA+ F+ ++YKLHG P I++DR KIFTS W +
Sbjct: 380 CILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNVYKLHGLPQIIISDRDKIFTSQLWEQ 439
Query: 826 LFKLLQVNLDLTSAYHPQSDGQTERLNQCLENYLRCMTHLNPKKWHKWLALAEHWYNTNY 1005
LF L +SAYHPQSDGQTER NQCLE YL+C P KW WL LAE+WYN +Y
Sbjct: 440 LFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPSKWPSWLHLAEYWYNNSY 499
Query: 1006 HTNI 1017
H+ I
Sbjct: 500 HSTI 503