BLASTX nr result

ID: Rehmannia24_contig00010393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00010393
         (534 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330447.1| predicted protein [Populus trichocarpa] gi|5...    61   2e-07

>ref|XP_002330447.1| predicted protein [Populus trichocarpa]
            gi|566166541|ref|XP_002306159.2| hypothetical protein
            POPTR_0004s14710g [Populus trichocarpa]
            gi|550341017|gb|EEE86670.2| hypothetical protein
            POPTR_0004s14710g [Populus trichocarpa]
          Length = 840

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
 Frame = -2

Query: 524  VIANQRETISDNHPCLPVK--DMSGAQEDAHVAYSIQDIISSVTEN-----GGEDKSLGI 366
            V  +Q   I D H C   +  +  G   D    Y  +D+I S TEN         + + I
Sbjct: 686  VFQSQGPQIPDEHRCSTTEYSENVGENSDQVSIYEKKDMICS-TENMDRVDDQNHEKVQI 744

Query: 365  LAENTSDERKDASSRLPPGKHGRRPLLKTVVKGTVIAGVLFLLLHIRKSKGNNASQETKE 186
            LA   S+  +  S      K  +RPLLKTV KGT + GVL  LLH RK+      Q  K+
Sbjct: 745  LAIENSNVTEGPSVEKADCKPPKRPLLKTVAKGTAVVGVLLFLLHFRKNDTEKTDQSVKQ 804

Query: 185  YGQVXXXXXXXXXXXXXXXXXXXXGIYPAEKLKL*N 78
              ++                     +YPAEKL+  N
Sbjct: 805  SNRLRKASGRNFSSLKSQKGSRTNRMYPAEKLRFGN 840


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