BLASTX nr result

ID: Rehmannia24_contig00010032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00010032
         (379 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275739.2| PREDICTED: ubiquitin-like-specific protease ...    58   1e-06
emb|CAN74574.1| hypothetical protein VITISV_000296 [Vitis vinifera]    58   1e-06

>ref|XP_002275739.2| PREDICTED: ubiquitin-like-specific protease ESD4-like [Vitis
           vinifera]
          Length = 528

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
 Frame = -2

Query: 354 SHISKRRNVSVSKNKDTPEYSSSYSVLPRISLYPHLKPRFSREVHAPVR--------QSR 199
           SHISK+  +S       P  SS  S   RI  YP    +  REVHAP R         S 
Sbjct: 35  SHISKKPRLSSMPQTPDPAVSSR-STASRIQRYPEPTAKLRREVHAPCRVVKFGFAASSN 93

Query: 198 LSSFSRIKKVEDSAGFEESSADKMGNCLGIQFPYDKVRNGAIKSLNFFRKDND 40
             S  RI +V++  G     ++ MGN L  Q  Y+K +N AI++L +FRKD +
Sbjct: 94  RESRLRIGEVDEKVGL----SNVMGNVLSSQ--YEKAKNTAIQALRYFRKDKE 140


>emb|CAN74574.1| hypothetical protein VITISV_000296 [Vitis vinifera]
          Length = 565

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
 Frame = -2

Query: 354 SHISKRRNVSVSKNKDTPEYSSSYSVLPRISLYPHLKPRFSREVHAPVR--------QSR 199
           SHISK+  +S       P  SS  S   RI  YP    +  REVHAP R         S 
Sbjct: 35  SHISKKPRLSSMPQTPDPAVSSR-STASRIQRYPEPTAKLRREVHAPCRVVKFGFAASSN 93

Query: 198 LSSFSRIKKVEDSAGFEESSADKMGNCLGIQFPYDKVRNGAIKSLNFFRKDND 40
             S  RI +V++  G     ++ MGN L  Q  Y+K +N AI++L +FRKD +
Sbjct: 94  RESRLRIGEVDEKVGL----SNVMGNVLSSQ--YEKAKNTAIQALRYFRKDKE 140


Top