BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00010011
         (1639 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   726   0.0  
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   711   0.0  
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   690   0.0  
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   687   0.0  
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   684   0.0  
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   684   0.0  
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     678   0.0  
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   672   0.0  
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   658   0.0  
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   656   0.0  
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   652   0.0  
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   651   0.0  
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   650   0.0  
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   650   0.0  
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           650   0.0  
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           650   0.0  
gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlise...   641   0.0  
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   636   e-180
gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus...   624   e-176
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     622   e-175

>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  726 bits (1874), Expect = 0.0
 Identities = 384/517 (74%), Positives = 427/517 (82%), Gaps = 2/517 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVSSSA+R+P+GL++R STR+  LKRPVI+SFK DK+KNT LIAP+ES++L +E +
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 449
            KEN KR R+V KRSERV+AV+  EA PSTLELDYSEAAAKLE+IYKRS  T  S+ +V  
Sbjct: 61   KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119

Query: 450  XXXXXXXXXXXXN-GXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVAXXX 623
                                      N V+++RK  KR+ L++RIAL   KEGE VA   
Sbjct: 120  HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH WLFKLMQPMK IL+
Sbjct: 180  RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQ 239

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            VKE LQ DLGRE TD E+AEATNMD   LRK+LEVGRAARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 240  VKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQ 299

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF NG RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT SSFTKV F
Sbjct: 300  DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKVPF 359

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLES+RVEIQKAKLELLFELQR+PTDEEII RVG+S ERYHEVM+VSKPVSSLHAR++ T
Sbjct: 360  GLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNKTT 419

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEE INGITDVDGV+GDKR+QPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 1634
            IAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  711 bits (1834), Expect = 0.0
 Identities = 375/521 (71%), Positives = 422/521 (80%), Gaps = 6/521 (1%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVSSSA+R+P+GL++R S R+  LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRS-----PATTVSD 434
            KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKRS     P T V D
Sbjct: 61   KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 435  EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFV 611
              V                           N V+++RK  KR+ L++RIAL   KEG+ +
Sbjct: 120  HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKML 175

Query: 612  AXXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMK 791
            A               ID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK
Sbjct: 176  ASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMK 235

Query: 792  EILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMN 971
             IL+VKE LQ DLGRE TD E+AEATNMD   LRK+LE GRAARNKLIKHNLRLVLFVMN
Sbjct: 236  AILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMN 295

Query: 972  KYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFT 1151
            KYFQDF N  RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+R MT SSFT
Sbjct: 296  KYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFT 355

Query: 1152 KVSFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHAR 1331
            KV FGLES+RVEIQKAKLELLFELQR+PTD+EII RVG S ERYHEVM+VSKP+ SLHAR
Sbjct: 356  KVPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHAR 415

Query: 1332 HEVTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 1511
            ++ TQEE INGITDVDGV+GDKR+QPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDR
Sbjct: 416  NKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 475

Query: 1512 TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 1634
            TLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 476  TLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  690 bits (1780), Expect = 0.0
 Identities = 354/518 (68%), Positives = 417/518 (80%), Gaps = 4/518 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++  TAL+AP+E + LP+E  
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 443
            K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T  +   EDV
Sbjct: 61   KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 444  XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAX 617
                          +            N V   R  K KR+ L KR+ALK  K+ + ++ 
Sbjct: 121  DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180

Query: 618  XXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 797
                          I+ LVR+YS+STDLVSLDWKKMKIPPVL S+EH+WLFKLMQPMK +
Sbjct: 181  IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240

Query: 798  LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 977
            L+VKE LQ DLGRE T+ ELAEATNM +V ++K LEVGRAAR+KLIKHNLRLVLFVMNKY
Sbjct: 241  LEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY 300

Query: 978  FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKV 1157
            FQDF NGP+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLSSFT+V
Sbjct: 301  FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRV 360

Query: 1158 SFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHE 1337
            SFGLESVR EIQKAKL +LF L+R+PT++EII++VGIS ERYHEVMR SKPV SLH+RH 
Sbjct: 361  SFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHT 420

Query: 1338 VTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 1517
             TQEEFINGITDVDGVEGD R++PA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 421  TTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 480

Query: 1518 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 481  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  687 bits (1772), Expect = 0.0
 Identities = 363/516 (70%), Positives = 411/516 (79%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVV+VSSSAARTP+GL+T+ ST+    +RP+ ++FK+DKS NTAL+ P+E + LP+E  
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 446
            KE+ KR  K KK  + VN V TD+  P TLE+DY+EAAAKLENIYK SPAT  SD E+V 
Sbjct: 61   KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                                        VR+Q  + KR+ L+ RIALK  +E + V    
Sbjct: 121  GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        IDRLVRDYS+STDLVSLDW+KMKIPPVLPS EH+WLFKLMQPMK +L+
Sbjct: 181  RKKSSENESEK-IDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQ 239

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
             KE LQ DLGR+ T+DELAEATNM    +RK LEVG+AARNKLIKHNLRLVLF +NKYFQ
Sbjct: 240  AKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQ 299

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTY LFWIRHAI+RSMTLSSFT+VSF
Sbjct: 300  DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSF 359

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLESVRVEIQ+AKLELLFEL R PT+EEII +VGIS ERY EVMR SKPV+SLH+RH VT
Sbjct: 360  GLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRHSVT 419

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEEFINGITD+DGV GD RRQPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 420  QEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 479

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 480  IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 2 [Solanum
            lycopersicum]
          Length = 487

 Score =  684 bits (1765), Expect = 0.0
 Identities = 367/521 (70%), Positives = 410/521 (78%), Gaps = 6/521 (1%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVSSSA+R+P+GL++R S R+  LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRS-----PATTVSD 434
            KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKRS     P T V D
Sbjct: 61   KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 435  EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFV 611
              V                           N V+++RK  KR+ L++RIAL   KEG   
Sbjct: 120  HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG--- 172

Query: 612  AXXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMK 791
                                      +TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK
Sbjct: 173  --------------------------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMK 206

Query: 792  EILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMN 971
             IL+VKE LQ DLGRE TD E+AEATNMD   LRK+LE GRAARNKLIKHNLRLVLFVMN
Sbjct: 207  AILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMN 266

Query: 972  KYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFT 1151
            KYFQDF N  RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+R MT SSFT
Sbjct: 267  KYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFT 326

Query: 1152 KVSFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHAR 1331
            KV FGLES+RVEIQKAKLELLFELQR+PTD+EII RVG S ERYHEVM+VSKP+ SLHAR
Sbjct: 327  KVPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHAR 386

Query: 1332 HEVTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 1511
            ++ TQEE INGITDVDGV+GDKR+QPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDR
Sbjct: 387  NKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 446

Query: 1512 TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 1634
            TLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYIF
Sbjct: 447  TLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 487


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  684 bits (1764), Expect = 0.0
 Identities = 362/519 (69%), Positives = 417/519 (80%), Gaps = 4/519 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAA--RTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVE 263
            MGVVTVSSSA+  RTP GLN + S   + L+RP++L+FK+DK+KN AL+ P E + LP+E
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 264  VNKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-ED 440
             +K++ KRLR+  K S+RV AVSTDE  P ++ELDY+EAAAKLENIYK SPAT VS+ ED
Sbjct: 61   TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 441  VXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVR-SQRKGKRMGLEKRIALKMKKEGEFVAX 617
            +                           N VR   +K KR+ LEKRIAL   K+ + VA 
Sbjct: 121  LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 618  XXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 797
                          ID LVR+YS+STDLVSLDWKKMKIPPVLP +EH+WLFKLMQPMK +
Sbjct: 181  IQKKRDSKNEDEN-IDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 798  LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 977
            L+VK+ LQ DLGRE TD ELAEA +M  V +R+ +EVG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 240  LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299

Query: 978  FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKV 1157
            FQ+F NGP+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLSSFT+V
Sbjct: 300  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRV 359

Query: 1158 SFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHE 1337
            SFGLESVRVEIQ+AKLELLF+LQRLPT+EEII++VGIS ERYHEVMR SK V SLHARH 
Sbjct: 360  SFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHARHA 419

Query: 1338 VTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 1517
             TQEE+INGITDV+GV GD+ RQ A+LRLALDDVLDSLKPKESLV+RQRYGLDGKGDRTL
Sbjct: 420  TTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTL 479

Query: 1518 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIF 1634
            GEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR+YIF
Sbjct: 480  GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  678 bits (1749), Expect = 0.0
 Identities = 351/516 (68%), Positives = 411/516 (79%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCST-RVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEV 266
            MGVVTVSSSA+RTP+GL+ + S+ R SVLK+P+I++FK DKS  T L+AP++ + LPVE 
Sbjct: 1    MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 267  NKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVX 446
             KE   R+ K KK S RV AV+TDEA  ST+E+DY+EAAAKLENI+K S A       + 
Sbjct: 61   RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADVEDAVGLT 120

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVAXXX 623
                         +              VR+++K  KR+ L KR+ LK  KE        
Sbjct: 121  SRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLV 180

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        I++LVR+YS+STDLVSLDWKKMKIPPVLPS+EH+WLFKLMQP+K++ +
Sbjct: 181  RKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQLFQ 240

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            V E LQ  LGRE T++ELAEATN+ +V +++ LE GRAARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 241  VGEDLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNKYFQ 300

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DFTNGP+FQDLCQAGV+GLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMT+SSFT+VSF
Sbjct: 301  DFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVSF 360

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLESVR EIQKAK+EL FEL+RLPT+EEII++VGIS ERYHEVMR SKPV SL++RH  T
Sbjct: 361  GLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRHVTT 420

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEEFIN ITDVDGV+GD RR+PA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 421  QEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 480

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 481  IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYM 516


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  672 bits (1733), Expect = 0.0
 Identities = 352/519 (67%), Positives = 414/519 (79%), Gaps = 5/519 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRC-STRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEV 266
            MGVVTVSSS +RTP+GL+T   S++ S L++P+I++F++DKS   AL+AP+E V LP+E 
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 267  NKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDV 443
             K+  KRL K +K  + V A   +EAP   LELDY+EAAAKLEN+YKRSP T  SD E+V
Sbjct: 61   GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120

Query: 444  XXXXXXXXXXXXXXNGXXXXXXXXXXXN--FVRS-QRKGKRMGLEKRIALKMKKEGEFVA 614
                                       +   VRS  +K KR+ L+KR+ALK  K+ +  A
Sbjct: 121  DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180

Query: 615  XXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKE 794
                           ++ LVR+YS+STDLVSLDWKKM+IPPVL S+EH+WLFKLMQPMK 
Sbjct: 181  SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG 240

Query: 795  ILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNK 974
            +L+VKE LQ DLGRE    ELAEATNM +V +++ LEVGRAARNKLIKHNLRLVLFV+NK
Sbjct: 241  LLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINK 300

Query: 975  YFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTK 1154
            YFQDF NGP+FQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLSSFT+
Sbjct: 301  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTR 360

Query: 1155 VSFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARH 1334
            VSFGLESVR EIQKAKLE+L +L+R+PT++EII++VGIS ERYHEVMR SKPV SL++RH
Sbjct: 361  VSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRH 420

Query: 1335 EVTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 1514
             VTQEEFINGITDVDGV+GD RR+PA+LRLA+DDVLDSLKPKESLVIRQRYGLDGKGDRT
Sbjct: 421  SVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRT 480

Query: 1515 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI
Sbjct: 481  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  658 bits (1698), Expect = 0.0
 Identities = 352/519 (67%), Positives = 402/519 (77%), Gaps = 5/519 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVSS+AARTP  L  + S   S LKRP I++FK+DK  NT L++P E V LPVE N
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 449
                KR     K  +RV AV  DEA P +L+LDY+EAAAKLENI+K SP T  SD++   
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 450  XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMKKEGEFVAXXXX 626
                        +              VR+Q K  KR+ L+KRIALK KKEG+ VA    
Sbjct: 121  GRSKRGQKRSKKSANRPGD------GIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174

Query: 627  XXXXXXXXXXX----IDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKE 794
                           IDRLVRDYS+STDLVSLDWKKMKIPPVLPS+EH+ LFKL+QPMK 
Sbjct: 175  QKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKA 234

Query: 795  ILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNK 974
            +++V+E LQ  LGRE T+ ELA ATNM+++ +R+QLEVGRAARNKLIKHNLRLVLFV+NK
Sbjct: 235  LVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINK 294

Query: 975  YFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTK 1154
            YF+DF +GP+FQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHAI+RSMTLSSFT+
Sbjct: 295  YFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTR 354

Query: 1155 VSFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARH 1334
            VSFGL+SVRVEIQ+AKLELL EL RLPT+ EI  +VGIS+ERY EVMR +KPV SLH+RH
Sbjct: 355  VSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRH 414

Query: 1335 EVTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 1514
              T EE INGITDV+G  GD RRQPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKG+RT
Sbjct: 415  STTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRT 474

Query: 1515 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 475  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  656 bits (1693), Expect = 0.0
 Identities = 352/515 (68%), Positives = 398/515 (77%), Gaps = 1/515 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVT SSSAARTP+GL+ + ST  S +KR ++++FK DK+ +  L+ PRE   LP+E +
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 449
            K         KKR  + N     E    TLE+DY+EAAAKLENIYK SPAT  SD D+  
Sbjct: 61   KG--------KKRRGKTNR----EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108

Query: 450  XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXXX 626
                                       VR++ +K KR+ L+KRIALK K E E V     
Sbjct: 109  LIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALK-KNEEEEVVGPIR 167

Query: 627  XXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKV 806
                       I+ LVR YS+ST+LVSLDW+KMKIPPVLPSTEH+WLFKLMQPMK +L V
Sbjct: 168  KKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227

Query: 807  KETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQD 986
            K  LQ +LGR+ TD ELAEATNM++  +RKQLEVGRAARNKLIKHNLRLV+FVMNKYFQD
Sbjct: 228  KADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNKYFQD 287

Query: 987  FTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFG 1166
            F NGPRFQDLCQAGVKGLITAIDRFEP+R+F+LSTY LFWIRHAI+RSMTLSSFTKVSFG
Sbjct: 288  FANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTKVSFG 347

Query: 1167 LESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVTQ 1346
            LESVR EIQKAKLELL ELQR PT+EEII+RVGIS ERYHEV+R +KP  SLHARH VTQ
Sbjct: 348  LESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARHAVTQ 407

Query: 1347 EEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 1526
            EEFINGITD+DG  GD RRQPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
Sbjct: 408  EEFINGITDIDG--GDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI 465

Query: 1527 AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            AGNLNISREMVRK+EVKALMKLKHPARVDYLRRY+
Sbjct: 466  AGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  652 bits (1681), Expect = 0.0
 Identities = 346/516 (67%), Positives = 401/516 (77%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVT+SSS AR+P+GL+T   +  S  KRP+I++FK+DKS N AL +P+E + LP+E  
Sbjct: 1    MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 449
            K + KR    +KR ERV  V +DEA P TL++DY+EAAAKLENIYK SPA T S+     
Sbjct: 59   KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118

Query: 450  XXXXXXXXXXXXNGXXXXXXXXXXXN-FVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                         G              VR+Q ++ KR+ L+KRI L+  ++ + V    
Sbjct: 119  GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVT--K 176

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        I++LVR+YS STDLVSLDWKKMKIPPVL STEH+WLFKLMQPMK  ++
Sbjct: 177  TRKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQ 236

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            VKE LQ DLGRE TD ELAEATNM    ++K LEVGRAARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 237  VKEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKKYFQ 296

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF NGPRFQDLCQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMT+SSFT+V F
Sbjct: 297  DFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTRVPF 356

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLESVR EIQ+AKLELLFEL+R+PTDEEII  V IS ERY EVM+ SKP+ SLH+RH VT
Sbjct: 357  GLESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRHGVT 416

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEEFINGITDVDGVE + +RQPA+LRLALDDVLDSLKPKESLVIRQR+GLDGKGDRTLGE
Sbjct: 417  QEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGE 476

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVK LMKLKHP RVDYLR+++
Sbjct: 477  IAGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHM 512


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  651 bits (1680), Expect = 0.0
 Identities = 351/521 (67%), Positives = 401/521 (76%), Gaps = 7/521 (1%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVSS+AARTP  L  + S   S LKRP I++FK+DK  NT L++P E V LPVE N
Sbjct: 1    MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 449
                KR     K  +RV AV  DEA P +L+LDY+EAAAKLENI+K SP T  SD++   
Sbjct: 61   NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 450  XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMK------KEGEF 608
                        +              VR+Q K  KR+ L+KRIALK K      KEG+ 
Sbjct: 121  GRSKRGQKRSKKSANRPGD------GIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174

Query: 609  VAXXXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPM 788
            V                IDRLVRDYS+STDLVSLDWKKMKIPPVLPS+EH+ LFKL+QPM
Sbjct: 175  VPSLRKQKETKNEDDE-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPM 233

Query: 789  KEILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVM 968
            K +++V+E LQ  LGRE T+ ELA ATNM+++ +R+QLEVGRAARNKLIKHNLRLVLFV+
Sbjct: 234  KALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVI 293

Query: 969  NKYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSF 1148
            NKYF+DF +GP+FQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHAI+RSMTLSSF
Sbjct: 294  NKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSF 353

Query: 1149 TKVSFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHA 1328
            T+VSFGL+SVRVEIQ+AKLELL EL RLPT+ EI  +VGIS+ERY EVMR +KPV SLH+
Sbjct: 354  TRVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHS 413

Query: 1329 RHEVTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGD 1508
            RH  T EE INGITDV+G  GD RRQPA+LRLALDDVLDSLKPKESLVIRQRYGLDGKG+
Sbjct: 414  RHSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGN 473

Query: 1509 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 474  RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  650 bits (1677), Expect = 0.0
 Identities = 350/516 (67%), Positives = 404/516 (78%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVV+VSSSA+RTP+GL+T+ ST  S  KRP+I++FK++KS NT+L+AP E + LPVE  
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 446
            K   KRL K KK S R+ AV T E  P TL +DY+EAAAKLENIYK SP T  SD ED  
Sbjct: 61   KGK-KRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                         +              VR++ +K KR+ LEKRI+L++K E + V+   
Sbjct: 119  GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID LVR+YS+STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK +L+
Sbjct: 179  KRKDRKNENEK-IDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            VKE LQ +LG E TD ELA+ATNMD++ +RKQ+ VGRAARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 238  VKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF NG +FQD CQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLSSFT+VSF
Sbjct: 298  DFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSF 357

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLES+R EIQKAKLEL F+L+R P ++EII++V IS ERYHEV R SKPV SLH+RH+ T
Sbjct: 358  GLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTT 417

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEEFI GI DVDG  GD RRQ A+LRLALDDVLDSLKPKESLV+RQRYGLDGKGDRTLGE
Sbjct: 418  QEEFIGGIADVDG--GDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGE 475

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVKALMKLKHP RVDYLRRY+
Sbjct: 476  IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  650 bits (1676), Expect = 0.0
 Identities = 339/516 (65%), Positives = 407/516 (78%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGV+TVS+SAARTP+ LNTR  +   V KRP+IL+FK +KS  T L++P+E + LP+E  
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 446
            K++ KR+ K  +  +RV AVST E  P TL++DY+EAAAKLENIYK SP + T + ED+ 
Sbjct: 61   KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                         +            N VR+Q +K KR+ L+KRIALK   + E V    
Sbjct: 121  SKIERVLRRRKKVS---EERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEE-VIDQT 176

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID L+RDYS+STDLVS+DWKKMKIPPVLPS+EH+WLFKLMQPMK +L+
Sbjct: 177  QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
             KE L+ ++ +E+T  ELA+ATNM I+ +RK +EVGRAARNKLIKHNLRLVLFV+NKYFQ
Sbjct: 237  AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 295

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF +GPRFQDLCQAGVKGLITAIDRFEPKR+ +LSTY LFWIRH+IVRS+TLSSFT+V F
Sbjct: 296  DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLE VRV+IQ+ KL+L FELQR PT+EE+++R+GIS ERYHEVM+ SKP+ SLH+RH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 415

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEE+INGITDVDGV GD RRQ A+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 476  IAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  650 bits (1676), Expect = 0.0
 Identities = 347/516 (67%), Positives = 403/516 (78%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MG+V+VSSSA+ TP+G +T+ ST  S  KRP+I++FK+DKS  TAL+AP E + LP+E  
Sbjct: 1    MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 446
            KE  KR  K KK S+R+ AV T E  P TL +DY+EAAAKLENIYK SP T  SD EDV 
Sbjct: 61   KEK-KRRGKSKKSSDRLKAVRT-EVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                         +              VR+Q +K KR+ L+KRIAL++K + + V    
Sbjct: 119  GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVG 178

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID LVR+YSSSTDL SLDWKKMKIPPVL S EH+WLFKLMQPMK  L+
Sbjct: 179  KRKGRKNENEK-IDELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQ 237

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            VKE LQ + GRE T+ ELAEAT+MD++ +RKQ+EVGRAARNKLIKHNLRLVLFV+NKYFQ
Sbjct: 238  VKEHLQENSGREPTEGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQ 297

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            D+ NGPR+QDLCQAGVKGL+TAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLSSFT+VSF
Sbjct: 298  DYANGPRYQDLCQAGVKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSF 357

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLES+R EIQKAKLEL F+L R PT EEII++VGIS ERYHEVMR SKPV SLH+RH+ T
Sbjct: 358  GLESIRSEIQKAKLELWFQLLRKPTGEEIIEKVGISIERYHEVMRASKPVLSLHSRHKTT 417

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEE I+G+ DV+G  GD RRQ A+LRLALDDVLDSLKPKESLV+RQR+GLDGKGDRTLGE
Sbjct: 418  QEELISGVADVNG--GDDRRQSALLRLALDDVLDSLKPKESLVVRQRFGLDGKGDRTLGE 475

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHE KALMKLKHP RVDYL RY+
Sbjct: 476  IAGNLNISREMVRKHEAKALMKLKHPTRVDYLCRYV 511


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  650 bits (1676), Expect = 0.0
 Identities = 350/516 (67%), Positives = 403/516 (78%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVV+VSSSA+RTP+GL+T+ ST  S  KRP+I++FK+DKS NT+L+AP E + LPVE  
Sbjct: 1    MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 446
            K   KRL K KK S R+ AV T E  P TL +DY+EAAAKLENIYK SP T  SD ED  
Sbjct: 61   KGK-KRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                         +              VR++ +K KR+ LEKRI+L++K E + V+   
Sbjct: 119  GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID LVR+YS+STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK +L+
Sbjct: 179  KRKDRKNENEK-IDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            VKE LQ +LG E TD ELA+A NMD++ +RKQ+ VGRAARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 238  VKEHLQENLGGEPTDVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF NG +FQD CQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLSSFT+VSF
Sbjct: 298  DFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSF 357

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLES+R EIQKAKLEL F+L+R P ++EII++V IS ERYHEV R SKPV SLH+RH+ T
Sbjct: 358  GLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRHKTT 417

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEEFI GI DVDG  GD RRQ A+LRLALDDVLDSLKPKESLV+RQRYGLDGKGDRTLGE
Sbjct: 418  QEEFIGGIADVDG--GDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGE 475

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVKALMKLKHP RVDYLRRY+
Sbjct: 476  IAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>gb|EPS69584.1| hypothetical protein M569_05182, partial [Genlisea aurea]
          Length = 488

 Score =  641 bits (1653), Expect = 0.0
 Identities = 345/491 (70%), Positives = 391/491 (79%), Gaps = 4/491 (0%)
 Frame = +3

Query: 177  RPVILSFKSDKSKNTALIAPRESVALPVE-VNKENGKRLRKVKKRSERVNAVSTDEAPPS 353
            RPVILSFK+ KS+ TALIA   S ALP++ V  ++ K+ RK+KKR E V AV TDEA  S
Sbjct: 1    RPVILSFKTTKSQKTALIAAPGSEALPLDDVKIQDVKKSRKLKKRPECVKAVPTDEASSS 60

Query: 354  T-LELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNF 530
            T L+LDY+EAAAKLE IYKRSPA+ VSDE+                            N 
Sbjct: 61   TTLDLDYNEAAAKLEKIYKRSPASVVSDEEEVDNGTAKRKRPQRKR---KSEHANAGVNI 117

Query: 531  VRSQRKG--KRMGLEKRIALKMKKEGEFVAXXXXXXXXXXXXXXXIDRLVRDYSSSTDLV 704
            VRS R    KR+ L +RI+L+MK E +  A               I RL+R+YS+S DL 
Sbjct: 118  VRSTRNKTKKRLNLNERISLRMKVESDSSATIHRKNVPKSDDDQKISRLLREYSASADLS 177

Query: 705  SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKETLQTDLGREVTDDELAEATNMDIV 884
            SLDWKKMKIPPVLPS+EH+WLFKLMQPMKE  KVKETL+  LGRE TD ELAEA NMD V
Sbjct: 178  SLDWKKMKIPPVLPSSEHTWLFKLMQPMKETNKVKETLKVALGREPTDYELAEAMNMDPV 237

Query: 885  HLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLITAIDRFE 1064
             LRK++EVGRA+RNKLI+HNLRLVLFVMNKYFQDF+NGP+FQDLCQAGVKGLITAIDRFE
Sbjct: 238  PLRKRIEVGRASRNKLIRHNLRLVLFVMNKYFQDFSNGPKFQDLCQAGVKGLITAIDRFE 297

Query: 1065 PKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSFGLESVRVEIQKAKLELLFELQRLPTDE 1244
            PKRK RLSTYGLFWIRHA+VRSMTLSSFTKVSFGLES+R EIQK K+EL+ +LQR PTDE
Sbjct: 298  PKRKSRLSTYGLFWIRHAVVRSMTLSSFTKVSFGLESIRAEIQKTKMELMVKLQRRPTDE 357

Query: 1245 EIIDRVGISRERYHEVMRVSKPVSSLHARHEVTQEEFINGITDVDGVEGDKRRQPAILRL 1424
            EI++RVGIS ERY EVMRV+KPVSSL+ARHE+T EEFI GI+D D VEGD+R++ A+LRL
Sbjct: 358  EIMNRVGISEERYREVMRVTKPVSSLNARHELTNEEFIAGISDADDVEGDRRKELALLRL 417

Query: 1425 ALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPA 1604
            A+DDVLDSLKPKE LVIRQRYGLDGKGDRTLGE+AGNLNISREMVRKHEVKALMKLKHPA
Sbjct: 418  AIDDVLDSLKPKEGLVIRQRYGLDGKGDRTLGEVAGNLNISREMVRKHEVKALMKLKHPA 477

Query: 1605 RVDYLRRYIFK 1637
            RVDYLRRYIFK
Sbjct: 478  RVDYLRRYIFK 488


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  636 bits (1641), Expect = e-180
 Identities = 334/516 (64%), Positives = 402/516 (77%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVS+ AARTP+ LNTR ++   V KRP+I++FK +K    AL++P+E + LP+E  
Sbjct: 1    MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 446
            K++ KR+ K  +  +RV AVS  E  P TL++DY+EAAAKLENIYK SP + T + ED+ 
Sbjct: 61   KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID 120

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                                        VR+Q +K KR+ L+KRI LK   + E V    
Sbjct: 121  SKVERVLWRRRKVGNEHDDENCDIV---VRNQNKKAKRLSLDKRITLKNNAKEE-VIDQT 176

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID L+RDYS+STDLVS+DWKKMKIP VLPS+EH+WLFKLMQPMK +L+
Sbjct: 177  QKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQ 236

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
             KE LQ+ +G+E+TD ELA+ATNM I+ +RK +EVGRAARNKLIKHNLRLVLFV++KYFQ
Sbjct: 237  AKEDLQS-VGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQ 295

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF +G RFQDLCQAGVKGLITAIDRFEPKR+ +LSTY LFWIRH+IVRS+TLSSFT+V F
Sbjct: 296  DFASGRRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GLE VRV+IQ+ KL+L FELQR PT+EE+++R+GIS ERY+EVM+ SKP+ SLH+RH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITT 415

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEE+INGITDVDGV GD RRQ A+LRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 476  IAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 511


>gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  624 bits (1610), Expect = e-176
 Identities = 322/516 (62%), Positives = 404/516 (78%), Gaps = 2/516 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVVTVS+SAARTP+ L+T+  +     KR +I++FK +K   T L++P+E + LP+E  
Sbjct: 1    MGVVTVSTSAARTPLRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETA 60

Query: 270  KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 446
            K++ KR+ K     +RV AVSTDE  P TL++DY+EAAAKLENIYK S  ++  D ED+ 
Sbjct: 61   KKHRKRIGKTNDSVKRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDID 120

Query: 447  XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAXXX 623
                                      + VR+Q +K KR+ L+KRIALK   + E +    
Sbjct: 121  SKTKRVLRRR---KNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQ 177

Query: 624  XXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 803
                        ID L+R+YS+STDLVS+DWKK+KIPPVLPS+EH+WLFKLM+PMKE+L+
Sbjct: 178  KKRDVNRIEN--IDALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQ 235

Query: 804  VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 983
            V+E LQ ++G+E++D ELA+A ++ ++ +RK LEVG+AARNKLIKHNLRLVLFV+NKYFQ
Sbjct: 236  VREDLQ-EVGKEISDGELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQ 294

Query: 984  DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKVSF 1163
            DF +GPRFQDLCQAGVKGLITAIDRFE KR+ +LSTY LFWIRH+IVRS+TLSS T+V F
Sbjct: 295  DFASGPRFQDLCQAGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPF 354

Query: 1164 GLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHEVT 1343
            GL+ VR +I +AKLEL FELQR PT++E+++R+GIS ERY++V++ SKP+ SLH+RH VT
Sbjct: 355  GLDRVRADIHRAKLELRFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIVT 414

Query: 1344 QEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 1523
            QEEFINGITD+DGV+GD RRQ A+LRLALDDVLDSLKPKESLV+RQRYGLDGKGDRTLGE
Sbjct: 415  QEEFINGITDLDGVDGDNRRQLAVLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGE 474

Query: 1524 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            IAGNLNISREMVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 475  IAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 510


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  622 bits (1603), Expect = e-175
 Identities = 332/518 (64%), Positives = 395/518 (76%), Gaps = 4/518 (0%)
 Frame = +3

Query: 90   MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 269
            MGVV +SSSAAR+P+GL++   T  S LK+P I++FK+D S N+ALI P E + +P E  
Sbjct: 1    MGVVFISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQ 60

Query: 270  KENGKRL---RKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDED 440
            KE  KR+   RK  K  ++ +++  + AP  +L +DY+EAAA+LE+IYK SPAT+V D D
Sbjct: 61   KE--KRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVED-D 117

Query: 441  VXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKGKRMGLEKRIALKMK-KEGEFVAX 617
            +               G                  K KR+ L+KRIALK   +E   V  
Sbjct: 118  IDGSKVKVSRRRRRKEGGEEKKVVVRNNGM-----KEKRLSLDKRIALKRNIQEKPLVPS 172

Query: 618  XXXXXXXXXXXXXXIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 797
                          I+RLVRDYS+S D+VSLDWKKMKIPPVLPSTEH+WLFKLMQPMK +
Sbjct: 173  AQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKAL 232

Query: 798  LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 977
            L+VK+ LQ  LGRE  + E+A   NM    +++++E+GRAARNKLIKHNLRLVLFVMNKY
Sbjct: 233  LQVKDELQKSLGREPRETEIAGEINMSAAEVKRKIEIGRAARNKLIKHNLRLVLFVMNKY 292

Query: 978  FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLSSFTKV 1157
            FQDFTNGP+FQDLCQAG++GLITAIDRFEPKRKFRLSTYGLFWIRHAI+RSMT S+FT+V
Sbjct: 293  FQDFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRV 352

Query: 1158 SFGLESVRVEIQKAKLELLFELQRLPTDEEIIDRVGISRERYHEVMRVSKPVSSLHARHE 1337
             FGLESVRVEI K K+ELLFEL RLPT++E+++R+ IS ERY EV+R +KPV SL+++H 
Sbjct: 353  PFGLESVRVEIYKTKMELLFELGRLPTEDEVVERLKISPERYREVLRAAKPVFSLNSKHS 412

Query: 1338 VTQEEFINGITDVDGVEGDKRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 1517
            VTQEEFINGITDVDGV  D RRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
Sbjct: 413  VTQEEFINGITDVDGVGADNRRQPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 472

Query: 1518 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1631
            GEIAGNLNISREMVRKHEVKALMKLKH ARVDYLR+YI
Sbjct: 473  GEIAGNLNISREMVRKHEVKALMKLKHQARVDYLRQYI 510