BLASTX nr result
ID: Rehmannia24_contig00009958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00009958
(423 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma c... 122 4e-26
ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212... 118 9e-25
gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus pe... 117 1e-24
ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu... 116 3e-24
ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cuc... 115 8e-24
ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 115 8e-24
ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212... 115 8e-24
ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251... 113 2e-23
ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251... 113 2e-23
ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300... 113 3e-23
ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation spec... 110 3e-22
gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus... 109 4e-22
gb|ESW18632.1| hypothetical protein PHAVU_006G057100g [Phaseolus... 109 4e-22
gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus no... 108 1e-21
ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation spec... 108 1e-21
ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation spec... 108 1e-21
ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation spec... 108 1e-21
ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation spec... 106 3e-21
ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutr... 103 2e-20
ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family pr... 102 4e-20
>gb|EOY12029.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508720133|gb|EOY12030.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508720134|gb|EOY12031.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 709
Score = 122 bits (307), Expect = 4e-26
Identities = 61/100 (61%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+GP+RNRAGGMG RG+ GNG FGQG+GA PPL+HPQAMMGQGFDP
Sbjct: 392 PVGPMRNRAGGMGGRGIMGNGGNGFGQGLGATPPLMHPQAMMGQGFDPAFGGPMGRMGGY 451
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 452 GGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 491
>ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
Length = 699
Score = 118 bits (295), Expect = 9e-25
Identities = 60/100 (60%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P GP+R R GGMG RG+ GNG FGQGIGA PPLLHPQ+MMGQGFDP+
Sbjct: 372 PAGPMRGRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTY 431
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 432 GGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 471
>gb|EMJ14823.1| hypothetical protein PRUPE_ppa002096mg [Prunus persica]
Length = 717
Score = 117 bits (294), Expect = 1e-24
Identities = 60/100 (60%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+G +RNR GGMG RG+ GNG FGQGIGA PPLLHPQ MMGQGFDP
Sbjct: 398 PVGQMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQQMMGQGFDPAFGAPMGRMGSY 457
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 458 GGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 497
>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
gi|223537989|gb|EEF39602.1| RNA-binding protein,
putative [Ricinus communis]
Length = 702
Score = 116 bits (290), Expect = 3e-24
Identities = 58/101 (57%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Frame = -2
Query: 293 PIGPIRNRAGG----MGVRGLTGNGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXX 126
P+GP+RNRAGG G+ G GNGFGQG+GA PPLLHP +MMGQGFDP
Sbjct: 383 PVGPMRNRAGGGMGGRGIMGNAGNGFGQGLGATPPLLHPNSMMGQGFDPAFGAPMGRMGS 442
Query: 125 XXXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 443 YGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 483
>ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
Length = 697
Score = 115 bits (287), Expect = 8e-24
Identities = 59/100 (59%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P G +R R GGMG RG+ GNG FGQGIGA PPLLHPQ+MMGQGFDP+
Sbjct: 372 PAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTY 431
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 432 GGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 471
>ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
[Cucumis sativus]
Length = 724
Score = 115 bits (287), Expect = 8e-24
Identities = 59/100 (59%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P G +R R GGMG RG+ GNG FGQGIGA PPLLHPQ+MMGQGFDP+
Sbjct: 397 PAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTY 456
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 457 GGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 496
>ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
Length = 697
Score = 115 bits (287), Expect = 8e-24
Identities = 59/100 (59%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P G +R R GGMG RG+ GNG FGQGIGA PPLLHPQ+MMGQGFDP+
Sbjct: 372 PAGQMRGRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTY 431
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 432 GGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 471
>ref|XP_004244046.1| PREDICTED: uncharacterized protein LOC101251795 [Solanum
lycopersicum]
Length = 695
Score = 113 bits (283), Expect = 2e-23
Identities = 56/100 (56%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+GP+RNR GG+ RG+ GNG FGQG+G APP++HPQ MMGQGFDP
Sbjct: 385 PVGPMRNRPGGIAGRGMMGNGGGGFGQGMGGAPPIMHPQTMMGQGFDPAFGGPMGRMGGY 444
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
MLSSF PVG VG+PGVAPHVNPAFFGR
Sbjct: 445 GGFPGGPAPPFPGMLSSFPPVGGVGMPGVAPHVNPAFFGR 484
>ref|XP_004244045.1| PREDICTED: uncharacterized protein LOC101251491 [Solanum
lycopersicum]
Length = 697
Score = 113 bits (283), Expect = 2e-23
Identities = 56/100 (56%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+GP+RNR GG+ RG+ GNG FGQG+G APP++HPQ MMGQGFDP
Sbjct: 385 PVGPMRNRPGGIAGRGMMGNGGGGFGQGMGGAPPIMHPQTMMGQGFDPAFGGPMGRMGGY 444
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
MLSSF PVG VG+PGVAPHVNPAFFGR
Sbjct: 445 GGFPGGPAPPFPGMLSSFPPVGGVGMPGVAPHVNPAFFGR 484
>ref|XP_004293188.1| PREDICTED: uncharacterized protein LOC101300984 [Fragaria vesca
subsp. vesca]
Length = 672
Score = 113 bits (282), Expect = 3e-23
Identities = 58/99 (58%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Frame = -2
Query: 293 PIGPIRNRAG--GMGVRGLTGNGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXXX 120
P GP+RNR G G G+ G GNGFGQGIGA PPL+HPQ+MMGQGFDP
Sbjct: 354 PGGPMRNRGGMSGRGIMGNGGNGFGQGIGATPPLIHPQSMMGQGFDPAFGAPMGRMGSYG 413
Query: 119 XXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
M+SSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 414 GFPGAPQPPFSGMMSSFPPVGGVGLPGVAPHVNPAFFGR 452
>ref|XP_006346135.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like isoform X1 [Solanum tuberosum]
gi|565358644|ref|XP_006346136.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
isoform X2 [Solanum tuberosum]
gi|565358646|ref|XP_006346137.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
isoform X3 [Solanum tuberosum]
Length = 695
Score = 110 bits (274), Expect = 3e-22
Identities = 55/100 (55%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+GP+RNR GG+ RG+ GNG FGQG+G APP++H Q MMGQGFDP
Sbjct: 385 PVGPMRNRPGGIAGRGMMGNGGGGFGQGMGGAPPIMHHQTMMGQGFDPAFGGPMGRMGGY 444
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
MLSSF PVG VG+PGVAPHVNPAFFGR
Sbjct: 445 GGFPGGPAPPFPGMLSSFPPVGGVGMPGVAPHVNPAFFGR 484
>gb|ESW18634.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
Length = 691
Score = 109 bits (272), Expect = 4e-22
Identities = 55/100 (55%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTG---NGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+ P+RNR GGMG RG+ G NGFGQGIG PPL+HPQ+MM QGFDP
Sbjct: 384 PVNPMRNRGGGMGGRGIMGHGGNGFGQGIGGTPPLMHPQSMMSQGFDPAFGGPMGRMGSY 443
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 444 GGFPGGPTPPFSGLLPSFPGVGGVGLPGVAPHVNPAFFGR 483
>gb|ESW18632.1| hypothetical protein PHAVU_006G057100g [Phaseolus vulgaris]
gi|561019862|gb|ESW18633.1| hypothetical protein
PHAVU_006G057100g [Phaseolus vulgaris]
Length = 523
Score = 109 bits (272), Expect = 4e-22
Identities = 55/100 (55%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTG---NGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+ P+RNR GGMG RG+ G NGFGQGIG PPL+HPQ+MM QGFDP
Sbjct: 384 PVNPMRNRGGGMGGRGIMGHGGNGFGQGIGGTPPLMHPQSMMSQGFDPAFGGPMGRMGSY 443
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 444 GGFPGGPTPPFSGLLPSFPGVGGVGLPGVAPHVNPAFFGR 483
>gb|EXB36065.1| RNA-binding motif protein, X chromosome [Morus notabilis]
Length = 687
Score = 108 bits (269), Expect = 1e-21
Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+G +RNR G +G RG+ GNG FGQGIG PP+LHPQ+MMGQGFDPT
Sbjct: 374 PVGQMRNRGGAIGGRGIMGNGGSGFGQGIGTTPPILHPQSMMGQGFDPTFGAPMGRMGSY 433
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF PVG VGLPGVAPHVNPAFFGR
Sbjct: 434 GGFPGAPTPPFSGLL-SFPPVGGVGLPGVAPHVNPAFFGR 472
>ref|XP_006586581.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 659
Score = 108 bits (269), Expect = 1e-21
Identities = 54/100 (54%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTG---NGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+ P+RNR GGMG RG+ G NGFGQG+G PP+LHPQ+MM QGFDP
Sbjct: 346 PVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPMLHPQSMMNQGFDPAFGGPMGRMGGY 405
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 406 GGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGR 445
>ref|XP_003551440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 696
Score = 108 bits (269), Expect = 1e-21
Identities = 54/100 (54%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTG---NGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+ P+RNR GGMG RG+ G NGFGQG+G PP+LHPQ+MM QGFDP
Sbjct: 383 PVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPMLHPQSMMNQGFDPAFGGPMGRMGGY 442
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 443 GGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGR 482
>ref|XP_003551437.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Glycine max]
gi|571543924|ref|XP_006602132.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Glycine max]
gi|571543928|ref|XP_006602133.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X3 [Glycine max]
Length = 698
Score = 108 bits (269), Expect = 1e-21
Identities = 54/100 (54%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTG---NGFGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+ P+RNR GGMG RG+ G NGFGQG+G PP+LHPQ+MM QGFDP
Sbjct: 383 PVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPMLHPQSMMNQGFDPAFGGPMGRMGGY 442
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 443 GGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGR 482
>ref|XP_003532176.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Glycine max]
Length = 693
Score = 106 bits (265), Expect = 3e-21
Identities = 57/100 (57%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
PI P+RNR GGMG RG+ GNG FGQG+GA PPLLHPQ+MM QGFDP
Sbjct: 381 PINPMRNRGGGMGGRGIMGNGGNGFGQGMGATPPLLHPQSMMNQGFDPA-FGPMGRMGSY 439
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 440 GGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGR 479
>ref|XP_006401427.1| hypothetical protein EUTSA_v10012809mg [Eutrema salsugineum]
gi|557102517|gb|ESQ42880.1| hypothetical protein
EUTSA_v10012809mg [Eutrema salsugineum]
Length = 712
Score = 103 bits (258), Expect = 2e-20
Identities = 56/102 (54%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPL--LHPQAMMGQGFDPTXXXXXXXXX 129
P G +RNR GGMG RGL GNG FGQG+G PP+ +HPQ+MMGQGFD
Sbjct: 393 PGGQMRNRPGGMGGRGLMGNGGGGFGQGMGTGPPMNMMHPQSMMGQGFDQAFGGPMARMG 452
Query: 128 XXXXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+LSSF PVG VGLPGVAPHVNPAFFGR
Sbjct: 453 GYGGFPGAPGPPFPGLLSSFPPVGGVGLPGVAPHVNPAFFGR 494
>ref|XP_004516100.1| PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS54-like
[Cicer arietinum]
Length = 710
Score = 102 bits (255), Expect = 4e-20
Identities = 54/100 (54%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Frame = -2
Query: 293 PIGPIRNRAGGMGVRGLTGNG---FGQGIGAAPPLLHPQAMMGQGFDPTXXXXXXXXXXX 123
P+ P+RNR GGMG RG+ GNG FGQG+GAAPP++H Q+MM QGFDP
Sbjct: 393 PVNPMRNRGGGMGGRGIMGNGGNGFGQGLGAAPPMMHHQSMMNQGFDP-GFGGPMGRMGG 451
Query: 122 XXXXXXXXXXXXXMLSSFGPVGNVGLPGVAPHVNPAFFGR 3
+L SF VG VGLPGVAPHVNPAFFGR
Sbjct: 452 YGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGR 491