BLASTX nr result

ID: Rehmannia24_contig00009573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00009573
         (446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351181.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   1e-07
ref|XP_004250361.1| PREDICTED: F-box/kelch-repeat protein At3g06...    62   1e-07
ref|XP_004250580.1| PREDICTED: F-box/kelch-repeat protein At3g06...    61   1e-07
ref|XP_004303229.1| PREDICTED: F-box/kelch-repeat protein At3g06...    56   6e-06
ref|XP_004250363.1| PREDICTED: F-box protein CPR30-like isoform ...    56   6e-06

>ref|XP_006351181.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           tuberosum]
          Length = 378

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
 Frame = -3

Query: 444 SWLELLETREFANSHLSKSVPGLVIYQ-SEIYSELIKIFEFEDEPNIEHHELHYNPVTEI 268
           S+L L    EF     S S   ++I+Q +   +  +K  +F  + N +H     +P+ ++
Sbjct: 37  SFLNLTLDSEFLKLSRSASPASIIIHQYNSNRTNTLKFLKFVVD-NFDH-----DPIGDL 90

Query: 267 DLNLFINPSHRSIEIQGSANGLLFLREINTQPNVFYICNPITREYMELQSQENFVYSYPT 88
           DL L+         + GS +G +         +  YI NP TREY+ L   +  V  +P 
Sbjct: 91  DLQLYFPVDQ--FFLVGSVHGFVCFNYFFGDVDSIYILNPTTREYIILPEPQR-VRKWPN 147

Query: 87  IVTYGFGVSKITSQHKVVRIFHECVRHPD 1
           IV YGFG   +  ++KVVRI+ E +R  D
Sbjct: 148 IVRYGFGFDPVRFEYKVVRIYQEEIRDDD 176


>ref|XP_004250361.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           lycopersicum]
          Length = 383

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
 Frame = -3

Query: 438 LELLETREFANSHLSKSVPGLVIYQ-SEIYSELIKIFEFEDEPNIEHHELHYNPVTEIDL 262
           L L    EF     S S   ++I+Q +   +  +K  +F  + N +H     +P+ ++DL
Sbjct: 40  LNLTLDSEFLKLSRSSSPAIIIIHQFNSNRTNTLKFLKFVVDYNFDH-----DPIGDVDL 94

Query: 261 NLFINPSHRSIEIQGSANGLLFLREINTQPNVFYICNPITREYMELQSQENFVYSYPTIV 82
            L          + GS +G +         +  YI NP TREY+ L+  +  V  +P IV
Sbjct: 95  QLHFPVVQ--FFLVGSVHGFVCFNYFFDSVDSIYILNPTTREYIVLREPQR-VRKWPNIV 151

Query: 81  TYGFGVSKITSQHKVVRIFHECVRHPD 1
            YGFG   +  ++KVVRI+ E +R  D
Sbjct: 152 RYGFGFDPVKLEYKVVRIYQEEIRDDD 178


>ref|XP_004250580.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           lycopersicum]
          Length = 262

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
 Frame = -3

Query: 438 LELLETREFANSHLSKSVPGLVIYQ-SEIYSELIKIFEFEDEPNIEHHELHYNPVTEIDL 262
           L L+   EF     S S   ++I+Q +   +  +KI +F  + N +H     +    +DL
Sbjct: 39  LNLILDSEFLKLSRSVSPATIIIHQFNSNRTNTLKILKFAVDYNFDH-----DSNVHLDL 93

Query: 261 NLFINPSHRSIEIQGSANGLLFLREINTQPNVFYICNPITREYMELQSQENFVYSYPTIV 82
            L+       + + GS +G +         +  YI NP TREY+ L   +  V  +P +V
Sbjct: 94  QLYFPVD--LVFLVGSVHGFVCFNYFFGNVDGIYILNPTTREYIILPEPQR-VRKWPNLV 150

Query: 81  TYGFGVSKITSQHKVVRIFHECVRHPD 1
           TYGFG   +  ++KVVRI+ E +R  D
Sbjct: 151 TYGFGFDPVRFEYKVVRIYQEEIRDSD 177


>ref|XP_004303229.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 475

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/83 (39%), Positives = 46/83 (55%)
 Frame = -3

Query: 252 INPSHRSIEIQGSANGLLFLREINTQPNVFYICNPITREYMELQSQENFVYSYPTIVTYG 73
           INP     E+  S NGLL L E +  P+V  +CNPIT E++ L        S+   +  G
Sbjct: 175 INPLDHRYELVNSCNGLLCLAEEHNGPSV--VCNPITGEFIHLPHVLKNE-SHKKCIGGG 231

Query: 72  FGVSKITSQHKVVRIFHECVRHP 4
           FG S  T+++KV+R+ HE   HP
Sbjct: 232 FGFSPKTNKYKVIRVLHEGADHP 254


>ref|XP_004250363.1| PREDICTED: F-box protein CPR30-like isoform 1 [Solanum
           lycopersicum]
          Length = 378

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
 Frame = -3

Query: 444 SWLELLETREFANSHLSKSVPGLVIYQSEIYSELIKIFEFEDEPNIEHHELHYNPVTEID 265
           S+L L    EF     S S   ++   +  +   +K+  F    N   H+ H      +D
Sbjct: 37  SYLNLTLNSEFLIMSRSASPASIISQFNSFWINSLKLLRFVCVDNNCDHDPH------VD 90

Query: 264 LNLFINPSHRSIEIQGSANGLLFLREINTQPNVFYICNPITREYMEL-QSQENFVYSYPT 88
           L+L ++       + GS +G +         +  YI NP TR+Y+ L +     V ++P 
Sbjct: 91  LHLRLSFPIDPFFLVGSVHGFVCFNSFVGDADSIYILNPTTRQYIILPKPSHKGVRNWPN 150

Query: 87  IVTYGFGVSKITSQHKVVRIFHE 19
           +V YGFG   +  Q+KVVRI+ +
Sbjct: 151 LVAYGFGFDPVRLQYKVVRIYRQ 173


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