BLASTX nr result

ID: Rehmannia24_contig00009553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00009553
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB12194.1| PHO2 [Nicotiana benthamiana]                            69   9e-10
ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating en...    62   6e-08
ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating en...    60   3e-07

>gb|ACB12194.1| PHO2 [Nicotiana benthamiana]
          Length = 921

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
 Frame = +3

Query: 45  DSSSHSISQVAIGIFTSITSSLFGSLISG----YKCTSEGGQIDGKPPSEQALELCNLNH 212
           +SSS  +SQ AIG F+SITSSLFGSL +     Y+  SE GQ    P  E+ +EL NLN 
Sbjct: 544 NSSSCLLSQAAIGSFSSITSSLFGSLSTSLFGTYQAISEEGQESRIPNEEEVIELSNLNA 603

Query: 213 G------GQLLVVEDLETLQIKEANED---ILLPSSSKHQKCFRQFD 326
           G      G +    ++E  Q +E  ED     LPSSSK  + FRQFD
Sbjct: 604 GIPTLEVGYVKASLEMELEQEQETTEDQKHYALPSSSKLPEDFRQFD 650


>ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Solanum tuberosum]
          Length = 926

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 45/107 (42%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
 Frame = +3

Query: 45  DSSSHSISQVAIGIFTSITSSLFG----SLISGYKCTSEGGQIDGKPPSEQALELCNLNH 212
           DS S  +S+ AIG F+SITSSLFG    SL   Y+  SE GQ       E+ +EL +LN 
Sbjct: 551 DSGSCLVSRTAIGFFSSITSSLFGSLSTSLFGAYQTISEEGQKSRIVDEEEVIELSHLNA 610

Query: 213 GGQLLVVEDLET---------LQIKEANEDILLPSSSKHQKCFRQFD 326
           G  +   EDL+           +  E  +D  LPSSSK  + FRQFD
Sbjct: 611 G--IPTFEDLKASPEMELEQGQETTEGQKDDALPSSSKLPEHFRQFD 655


>ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Solanum lycopersicum]
          Length = 925

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
 Frame = +3

Query: 45  DSSSHSISQVAIGIFTSITSSLFG----SLISGYKCTSEGGQIDGKPPSEQALELCNLNH 212
           DS S  IS+ A+G F+SITS+LFG    SL   Y+  SE GQ       E+ +EL +LN 
Sbjct: 550 DSGSCLISRTAVGFFSSITSTLFGSLSISLFGTYQTISEEGQKSRIVDEEEVIELSHLNA 609

Query: 213 G----GQLLVVEDLETLQIKEANE---DILLPSSSKHQKCFRQFD 326
           G      L    ++E  Q++E  E   D  LPSSS   + F+QFD
Sbjct: 610 GIPTFENLKASPEMELEQVQETTEGQKDDALPSSSNLPEHFKQFD 654


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