BLASTX nr result

ID: Rehmannia24_contig00009551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00009551
         (315 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB12194.1| PHO2 [Nicotiana benthamiana]                            63   5e-08
ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating en...    60   4e-07
ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating en...    55   7e-06

>gb|ACB12194.1| PHO2 [Nicotiana benthamiana]
          Length = 921

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
 Frame = +1

Query: 22  DSSTHSISQVAIGIFTSITSSLFG----SLISDYKCTSEGGQIDGKPPSEEALELCNLNH 189
           +SS+  +SQ AIG F+SITSSLFG    SL   Y+  SE GQ    P  EE +EL NLN 
Sbjct: 544 NSSSCLLSQAAIGSFSSITSSLFGSLSTSLFGTYQAISEEGQESRIPNEEEVIELSNLNA 603

Query: 190 G------GQLLVVEDLETHEKKITSLQIKEANEDILLPSSNKHPECFR 315
           G      G +    ++E  +++ T+    E  +   LPSS+K PE FR
Sbjct: 604 GIPTLEVGYVKASLEMELEQEQETT----EDQKHYALPSSSKLPEDFR 647


>ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Solanum tuberosum]
          Length = 926

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
 Frame = +1

Query: 22  DSSTHSISQVAIGIFTSITSSLFGSLISD----YKCTSEGGQIDGKPPSEEALELCNLNH 189
           DS +  +S+ AIG F+SITSSLFGSL +     Y+  SE GQ       EE +EL +LN 
Sbjct: 551 DSGSCLVSRTAIGFFSSITSSLFGSLSTSLFGAYQTISEEGQKSRIVDEEEVIELSHLNA 610

Query: 190 GGQLLVVEDLE-THEKKITSLQ-IKEANEDILLPSSNKHPECFR 315
           G  +   EDL+ + E ++   Q   E  +D  LPSS+K PE FR
Sbjct: 611 G--IPTFEDLKASPEMELEQGQETTEGQKDDALPSSSKLPEHFR 652


>ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Solanum lycopersicum]
          Length = 925

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
 Frame = +1

Query: 22  DSSTHSISQVAIGIFTSITSSLFG----SLISDYKCTSEGGQIDGKPPSEEALELCNLNH 189
           DS +  IS+ A+G F+SITS+LFG    SL   Y+  SE GQ       EE +EL +LN 
Sbjct: 550 DSGSCLISRTAVGFFSSITSTLFGSLSISLFGTYQTISEEGQKSRIVDEEEVIELSHLNA 609

Query: 190 GGQLLVVEDLE-THEKKITSLQ-IKEANEDILLPSSNKHPECFR 315
           G  +   E+L+ + E ++  +Q   E  +D  LPSS+  PE F+
Sbjct: 610 G--IPTFENLKASPEMELEQVQETTEGQKDDALPSSSNLPEHFK 651


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