BLASTX nr result
ID: Rehmannia24_contig00008918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00008918
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera] 83 4e-14
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera] 69 8e-10
emb|CAN67728.1| hypothetical protein VITISV_032763 [Vitis vinifera] 69 8e-10
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 67 2e-09
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 66 4e-09
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera] 65 9e-09
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 65 9e-09
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 64 2e-08
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera] 64 2e-08
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 64 2e-08
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 64 2e-08
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 64 3e-08
ref|XP_006494887.1| PREDICTED: uncharacterized protein LOC102630... 63 4e-08
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 63 5e-08
ref|XP_006494125.1| PREDICTED: uncharacterized protein LOC102621... 62 6e-08
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 62 8e-08
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc... 62 8e-08
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 62 1e-07
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera] 61 2e-07
emb|CBI25270.3| unnamed protein product [Vitis vinifera] 60 2e-07
>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
Length = 735
Score = 82.8 bits (203), Expect = 4e-14
Identities = 45/113 (39%), Positives = 56/113 (49%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY+ WR+QVL RAH D+ L+ E+ QW+ D
Sbjct: 54 NYTIWRSQVLPAARAHRLDQILI----------------------EYDQWVILDQFLLSW 91
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
E M GHV C +S E+WSVLEKLF S SKAR + LR +LQ+ KKG L
Sbjct: 92 ILASIFEAMYGHVVNCQTSTEVWSVLEKLFVSDSKARTLQLRFMLQSLKKGAL 144
>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
Length = 722
Score = 68.6 bits (166), Expect = 8e-10
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSV-VXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXX 178
NYS+W++Q+L VRA+G + FL V +F W D
Sbjct: 42 NYSFWKSQILPAVRAYGLEGFLTSDHVHPPATIADANDPQVFVENPDFLYWTCIDQFLVS 101
Query: 179 XXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTK 328
E MLGHV RC+S+ +IWS L ++F SKAR++ LR LQ K
Sbjct: 102 WLIGSISEAMLGHVIRCTSTTKIWSTLHEVFGIQSKARILQLRQQLQLKK 151
>emb|CAN67728.1| hypothetical protein VITISV_032763 [Vitis vinifera]
Length = 1009
Score = 68.6 bits (166), Expect = 8e-10
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSV-VXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXX 178
NYS+W++Q+L VRA+G + FL V +F W D
Sbjct: 42 NYSFWKSQILPAVRAYGLEGFLTSDHVHPPATIADANDPQVFVENPDFLYWTCIDQFLVS 101
Query: 179 XXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTK 328
E MLGHV RC+S+ +IWS L ++F SKAR++ LR LQ K
Sbjct: 102 WLIGSISEAMLGHVIRCTSTTKIWSTLHEVFGIQSKARILQLRQQLQLKK 151
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/113 (32%), Positives = 57/113 (50%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY WR+Q+ + A+GF++F+ GTS+ F W R+D
Sbjct: 44 NYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPGVMNPA-----FVAWRRQDRTILSW 98
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
G++ + ++S W+ LE +F SSS+AR+M LRL LQ+TKKG +
Sbjct: 99 IYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKGSM 151
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGT--SVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXX 175
NY+ WR+QVL + RAH D+ L+G E+ QW+ D
Sbjct: 51 NYTIWRSQVLPSARAHRLDQILIGKLPKPPRFSQSTSVNSSQPTSNPEYDQWVILDXFLL 110
Query: 176 XXXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKAR 292
E M GHV C +SAE+WSVLEKLF S K++
Sbjct: 111 SWILASISEAMYGHVVNCQTSAEVWSVLEKLFVSDYKSK 149
>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
Length = 515
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/111 (34%), Positives = 52/111 (46%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY W+ Q+ V A+GF+E++ GT +F QW R D
Sbjct: 10 NYILWKTQMENVVYANGFEEYIEGTK-----SCPPKELPTGDLNPDFVQWRRFDRMVLSW 64
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
++G + +S E W L K+F +SSKAR+M LRL QTTKKG
Sbjct: 65 MYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKG 115
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/113 (33%), Positives = 56/113 (49%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY WR+Q+ + A+GF++F+ GTS F W R+D
Sbjct: 41 NYILWRSQIDNVIFANGFEDFIDGTSXCPEKELRPXEINPA-----FVAWRRQDRTILSW 95
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
G++ + +SS W+ LEK+F S S+AR+M LRL Q+TKKG +
Sbjct: 96 IYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLRLEFQSTKKGSM 148
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/111 (33%), Positives = 52/111 (46%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY W+ Q+ V A+GF++++ GT +F QW R D
Sbjct: 38 NYILWKTQMENVVYANGFEDYIEGTK-----SCPPKELPTGDLNPDFVQWRRFDRMVLSW 92
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
++G + +S E W L K+F +SSKAR+M LRL QTTKKG
Sbjct: 93 MYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKG 143
>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
Length = 2220
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/113 (33%), Positives = 55/113 (48%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY W++Q+ V A+GF++F+ G S+ F W R+D
Sbjct: 886 NYILWKSQIDNVVFANGFEDFIDGFSICPDKELSSGLINPA-----FVAWRRQDRTILSW 940
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
++ + +SS W+ LEK F SSS+AR+M LRL LQ+TKKG L
Sbjct: 941 LYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKGSL 993
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/111 (33%), Positives = 52/111 (46%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY W+ Q+ V A+GF++++ GT +F QW R D
Sbjct: 38 NYILWKTQMENVVYANGFEDYIEGTK-----SCPPKELPTGDLNPDFVQWRRFDRMVLSW 92
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
++G + +S E W L K+F +SSKAR+M LRL QTTKKG
Sbjct: 93 MYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKG 143
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/111 (33%), Positives = 52/111 (46%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY W+ Q+ V A+GF++++ GT +F QW R D
Sbjct: 38 NYILWKTQMENVVYANGFEDYIEGTK-----SCPPKELPTGDLNPDFVQWRRFDRMVLSW 92
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
++G + +S E W L K+F +SSKAR+M LRL QTTKKG
Sbjct: 93 MYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKG 143
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXE-FQQWIRRDXXXXX 178
NY W+AQVL +RA D+ L G + + +WI RD
Sbjct: 28 NYLLWKAQVLPAIRAAQLDDILTGVEICPPKTISDASDRTVTVANPAYGRWIARDQAVLG 87
Query: 179 XXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
+L V CS+SA +W+ L +++ S S+AR ++ R+ L TTKKG
Sbjct: 88 YLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKG 139
>ref|XP_006494887.1| PREDICTED: uncharacterized protein LOC102630134 [Citrus sinensis]
Length = 450
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTS---------VVXXXXXXXXXXXXXXXXXEFQQWI 154
N+ WR QVLA+++ +G + F+ G + + F WI
Sbjct: 23 NFLVWRNQVLASIKGNGLEGFITGANQCPDQYCNQINEASSSANAGSNSRTENLAFATWI 82
Query: 155 RRDXXXXXXXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
R D E +L V C SS E+W L ++F S ++AR+M L++ LQT KKG
Sbjct: 83 RTDQLLLSWMFSSIQENLLTSVIHCVSSKELWDSLTRMFVSQTQARIMPLKMQLQTAKKG 142
Query: 335 DL 340
+
Sbjct: 143 SM 144
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSV-----VXXXXXXXXXXXXXXXXXEFQQWIRRDX 166
NY+ W+AQVLA+VR + L GT+ + + +W+ D
Sbjct: 20 NYALWKAQVLASVRGARLEGHLTGTTAAPAITISVPGEKEGDKATRVANPAYDEWVATDQ 79
Query: 167 XXXXXXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
+L V C ++A WS+LE+++ S ++AR ++ R+ L TKKGDL
Sbjct: 80 QILGLLLSTLSRDVLAQVATCGTAATAWSMLEEMYTSMTRARFINTRIALSNTKKGDL 137
>ref|XP_006494125.1| PREDICTED: uncharacterized protein LOC102621758 [Citrus sinensis]
Length = 382
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXE---FQQWIRRDXXX 172
NY WR+QVLA++R + ++F+ G E +Q W D
Sbjct: 41 NYLLWRSQVLASIRGNRLEDFITGIKSAPEENILLAGVDGSTQQIENPEYQIWRSHDQIL 100
Query: 173 XXXXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
EG+L V C SS+ +W +LEK F S+ARV+ LR L T KK L
Sbjct: 101 LGWLLSTLSEGILSLVINCDSSSGVWKMLEKKFGVQSEARVLQLRYELNTLKKESL 156
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +2
Query: 206 MLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
M GHV C +SAE+WSVLEKLF S+SKAR + LR +LQ+ KKG L
Sbjct: 1 MYGHVVNCQTSAEVWSVLEKLFVSNSKARTLQLRFMLQSLKKGAL 45
>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1180
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGT--SVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXX 175
NY W+ QVLA +R D +L G + F +WI D
Sbjct: 26 NYLIWKVQVLAVIRGARLDGYLTGAIRAPSPTTIIKKSDKDVEVPNPAFDEWIANDQQVL 85
Query: 176 XXXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
+L V C S+A +WSV+E +F S+++AR ++ ++ L TKKGDL
Sbjct: 86 GYLLTTMSRDVLSKVATCGSAAALWSVVEGMFSSATRARSINTKITLTNTKKGDL 140
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXE--FQQWIRRDXXXX 175
NY W+ QVLA +R D +L G + +WI D
Sbjct: 26 NYLIWKVQVLAVIRGARLDSYLTGATKKPSATIIIKKNEKEVEVSNPAVDEWIANDQQVL 85
Query: 176 XXXXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
+L V CSS+A +WS +E +F S+++AR ++ ++ L TKKGDL
Sbjct: 86 GYLLTTMSRDVLSQVATCSSAASLWSTIEGMFSSATRARSINTKIALTNTKKGDL 140
>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
Length = 1282
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/111 (33%), Positives = 54/111 (48%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY W++Q+ V A+GF++F+ G+S+ F W R+D
Sbjct: 41 NYILWKSQIDNVVFANGFEDFIDGSSICPDKELXSGLINPA-----FVAWRRQDRTILSW 95
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKG 334
+ + +S W+ LEK F SSS+AR+M LRL LQ+TKKG
Sbjct: 96 LYSSLTPAXMAQIIGHNSXHSAWNALEKTFSSSSRARIMQLRLELQSTKKG 146
>emb|CBI25270.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = +2
Query: 2 NYSYWRAQVLATVRAHGFDEFLLGTSVVXXXXXXXXXXXXXXXXXEFQQWIRRDXXXXXX 181
NY WR Q+L + A+G +E + G E+ W ++
Sbjct: 37 NYLLWRTQMLNIIIANGLEEMIHGK----IPAPSRFLGDSENINPEYSIWQCQNRLVMCW 92
Query: 182 XXXXXXEGMLGHVNRCSSSAEIWSVLEKLFQSSSKARVMHLRLLLQTTKKGDL 340
+G++ + +++EIW+ LEK+F ++SKAR+M L LQTTKKG L
Sbjct: 93 IYSSLTKGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLHFQLQTTKKGGL 145