BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00008893
         (693 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protei...    92   2e-16
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1...    77   5e-12
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ...    73   1e-10
ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago trunc...    70   5e-10
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc...    69   1e-09
sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protei...    69   2e-09
ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chl...    66   1e-08
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl...    66   1e-08
gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma ...    65   2e-08
ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycin...    65   2e-08
ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chl...    65   3e-08
gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo...    64   4e-08
ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycin...    64   4e-08
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin...    64   6e-08
gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus pe...    63   8e-08
gb|EXB93319.1| hypothetical protein L484_015307 [Morus notabilis]      62   1e-07
sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protei...    62   1e-07
ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast pr...    62   1e-07
gb|ABD91572.1| unknown [Brassica rapa]                                 62   2e-07
ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]...    62   2e-07

>gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
           kurrooa]
          Length = 102

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 50/86 (58%), Positives = 56/86 (65%)
 Frame = -3

Query: 532 KQNLTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEP 353
           KQ  TT   GV +VRASK+S+ +   N KEE NNTRRDLMF               A EP
Sbjct: 18  KQLPTTGRGGVAMVRASKESEKLTV-NVKEESNNTRRDLMFAMAAVVASSIANFAMADEP 76

Query: 352 QRGTAEAKKKYAPVCVTNPTARICRY 275
           +RGT EAKKKYA VCVTNPTARIC+Y
Sbjct: 77  KRGTVEAKKKYAAVCVTNPTARICKY 102


>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
           unknown [Populus trichocarpa]
           gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 105

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
 Frame = -3

Query: 532 KQNLTTAHRGVVVVRASKDSDNM-VAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIE 356
           KQ LTT  RG++V +AS+ ++ + V    KEE ++ RRDLMF               A E
Sbjct: 18  KQPLTTPRRGLIVAKASRTTEGVNVEMKNKEESSSGRRDLMFAAAAAAAYSIARVAIADE 77

Query: 355 -PQRGTAEAKKKYAPVCVTNPTARICR 278
            P+RGT EAKKKYAP+CVT PTARICR
Sbjct: 78  EPERGTPEAKKKYAPICVTMPTARICR 104


>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
           gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
           protein [Populus trichocarpa]
          Length = 105

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
 Frame = -3

Query: 595 MASITMXXXXXXXXXXXXXXAKQNLTTAHRGVVVVRASKDSDNM-VAPNTKEEGNNTRRD 419
           MASITM               KQ  TT  RG++V +AS+ ++ + V    +EE +  RRD
Sbjct: 1   MASITMTASFLTGSAMA----KQPSTTPRRGLIVAKASRATEGVNVEMKNREESSGGRRD 56

Query: 418 LMFXXXXXXXXXXXXXXXAIE-PQRGTAEAKKKYAPVCVTNPTARICR 278
           LMF               A E P+RGT EAKKKYAP+CVT PTARICR
Sbjct: 57  LMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICR 104


>ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488306|gb|AES69509.1| Photosystem II 5 kDa protein
           [Medicago truncatula] gi|388501032|gb|AFK38582.1|
           unknown [Medicago truncatula]
          Length = 105

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 46/108 (42%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
 Frame = -3

Query: 595 MASITMXXXXXXXXXXXXXXAKQNLTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDL 416
           MASITM               + ++ T  R VV    + + +  V  +  +EG+N RRDL
Sbjct: 1   MASITMTSSMVGFPAVTN---RSSVATQRRFVVSAVRAVEGEKTVKYDDDKEGSNGRRDL 57

Query: 415 MFXXXXXXXXXXXXXXXAI-EPQRGTAEAKKKYAPVCVTNPTARICRY 275
           MF               A  EP+RGT EAKKKY PVCVTNPTARICRY
Sbjct: 58  MFAAAAAAVCSVAGVAMADDEPRRGTPEAKKKYGPVCVTNPTARICRY 105


>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
           [Medicago truncatula]
          Length = 106

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -3

Query: 595 MASITMXXXXXXXXXXXXXXAKQNLTTAHRGVVVVRASK--DSDNMVAPNTKEEGNNTRR 422
           MASITM                Q+   + R +VVV A +  + + M+  +  +EG+N RR
Sbjct: 1   MASITMTSSILGFPAVT----NQSSVASQRRLVVVNAVRAVEGEKMIRYDNSKEGSNGRR 56

Query: 421 DLMFXXXXXXXXXXXXXXXAIE-PQRGTAEAKKKYAPVCVTNPTARICR 278
           DLMF               A E P+RGT EAKKKYAPVCVT PTARICR
Sbjct: 57  DLMFAAAAAAVSTFAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICR 105


>sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protein, chloroplastic; Flags:
           Precursor
          Length = 106

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = -3

Query: 508 RGVVVVRASKDSDNMVAPNTKEEGNNT-RRDLMFXXXXXXXXXXXXXXXAIE-PQRGTAE 335
           RGVV+V+A  + +N V  +  EE  N+ RR+L F               A E P+RGT E
Sbjct: 27  RGVVMVKAMHEGENNVVISKNEESKNSGRRELFFAMAAAAACSVAKTAMADEEPKRGTPE 86

Query: 334 AKKKYAPVCVTNPTARICRY 275
           AKKKY+ VCVTNPTARICRY
Sbjct: 87  AKKKYSSVCVTNPTARICRY 106


>ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Cicer
           arietinum]
          Length = 105

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -3

Query: 508 RGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAI-EPQRGTAEA 332
           R VV    + +  N V+ +  +EG+N RRDLMF               A  EP+RGT EA
Sbjct: 27  RLVVSAVRAVEGKNSVSYDNDKEGSNGRRDLMFAAAAAAVCSVAGVAMADDEPKRGTPEA 86

Query: 331 KKKYAPVCVTNPTARICRY 275
           KKKYA VCVTNPTA+ICRY
Sbjct: 87  KKKYAVVCVTNPTAKICRY 105


>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 104

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
 Frame = -3

Query: 520 TTAHRGVVVVRASKDSD----NMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEP 353
           +T  R ++V +AS+  +     +    +KEE ++ RRDL+F               A EP
Sbjct: 19  STPRRSLIVAKASRAPEAEKVTVELKQSKEESSSGRRDLIFAAAAAAACSIAKVAMADEP 78

Query: 352 QRGTAEAKKKYAPVCVTNPTARICR 278
           +RGT  AKKKYAPVCVT PTARICR
Sbjct: 79  ERGTPAAKKKYAPVCVTMPTARICR 103


>gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma cacao]
          Length = 122

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = -3

Query: 520 TTAHRGVVVVRASKDSDNMVAPNTKEEG-NNTRRDLMFXXXXXXXXXXXXXXXAIE-PQR 347
           TTA RGV+V +AS+ ++        ++G NN RR+L+F                 E P+ 
Sbjct: 24  TTARRGVIVAKASEAAEGEKGSRELKQGSNNRRRELVFAAAAAAACSIANVAMGAEDPKA 83

Query: 346 GTAEAKKKYAPVCVTNPTARIC 281
           GT EAKKKYAP+CVT PTAR+C
Sbjct: 84  GTPEAKKKYAPICVTMPTARVC 105


>ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycine max]
           gi|255626973|gb|ACU13831.1| unknown [Glycine max]
          Length = 101

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 38/85 (44%), Positives = 50/85 (58%)
 Frame = -3

Query: 532 KQNLTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEP 353
           K++   A R ++VV A+K     V+ +  +  +N RR+LMF               A EP
Sbjct: 18  KRSAVAAQRRLLVVSAAKAEGEKVSYDNND--SNGRRNLMFAVAAAAVPSVAGMAVADEP 75

Query: 352 QRGTAEAKKKYAPVCVTNPTARICR 278
           + GT+EAKKKYAPVCVTNPTA ICR
Sbjct: 76  KPGTSEAKKKYAPVCVTNPTASICR 100


>ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 106

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
 Frame = -3

Query: 532 KQNLTTAHRGVVVVRASKDSD----NMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXX 365
           KQ  +TA R ++V +AS  +     NM   N K E    RR+L+                
Sbjct: 17  KQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELVAAAVTVAAATLAKAAM 76

Query: 364 AIEPQRGTAEAKKKYAPVCVTNPTARICR 278
           A EP RG+ EAK+KYAP+CVT PTARICR
Sbjct: 77  ADEPARGSPEAKQKYAPICVTMPTARICR 105


>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
          Length = 106

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -3

Query: 514 AHRGVVVVRASKDSDN---MVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEPQRG 344
           AHR +VV  A+K ++     ++  TK E NN RR+LMF               A EP+ G
Sbjct: 24  AHRRLVVANAAKGAEVERVKLSGETKRECNNGRRELMFAAAAAAVCSVAGVAAADEPKPG 83

Query: 343 TAEAKKKYAPVCVTNPTARIC 281
           T EA+K YAP+CVT PTARIC
Sbjct: 84  TPEARKVYAPICVTMPTARIC 104


>ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycine max]
           gi|255628337|gb|ACU14513.1| unknown [Glycine max]
          Length = 104

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 39/81 (48%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -3

Query: 517 TAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAI-EPQRGT 341
           T  R VVV  ASK  +     +    G+N RR+LMF                  EP+ GT
Sbjct: 24  TQRRSVVVNAASKSVEGEKV-SYDNNGSNARRNLMFATAAAAVCSFAAGMALADEPKPGT 82

Query: 340 AEAKKKYAPVCVTNPTARICR 278
           +EAKKKYAPVCVTNPTARICR
Sbjct: 83  SEAKKKYAPVCVTNPTARICR 103


>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
           gi|255632908|gb|ACU16808.1| unknown [Glycine max]
          Length = 104

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 36/82 (43%), Positives = 45/82 (54%)
 Frame = -3

Query: 523 LTTAHRGVVVVRASKDSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEPQRG 344
           + T  R +VV  A       V+ +   +G+N RR+LMF               A EP+ G
Sbjct: 22  VATQRRSLVVNAAKAVEAEKVSYDNDMDGSNGRRNLMFAAAAAAVCSVAGMAVADEPKPG 81

Query: 343 TAEAKKKYAPVCVTNPTARICR 278
           T EAKKKYAP+CVT PTARICR
Sbjct: 82  TPEAKKKYAPICVTMPTARICR 103


>gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus persica]
          Length = 107

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = -3

Query: 520 TTAHRGVVVVRASK----DSDNMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEP 353
           +TA R ++V +AS     +  ++    +    ++ RRDLMF               A EP
Sbjct: 22  STARRSLIVAKASSAPEGEKGSLEMKKSSSSSSSGRRDLMFAAAAAAACSIAKAAMADEP 81

Query: 352 QRGTAEAKKKYAPVCVTNPTARICR 278
           +RG+ EAK+KYAPVCVT PTARICR
Sbjct: 82  KRGSKEAKEKYAPVCVTMPTARICR 106


>gb|EXB93319.1| hypothetical protein L484_015307 [Morus notabilis]
          Length = 109

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = -3

Query: 520 TTAHRGVVVVRASKDSD----NMVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIE- 356
           T + RG++V +AS  S+    N+    +KEE ++ RRDLM                A E 
Sbjct: 23  TASRRGLIVAKASAGSEAEKVNLQMRKSKEENSSGRRDLMLAVAAAAACSVAKIAMADEE 82

Query: 355 PQRGTAEAKKKYAPVCVTNPTARICR 278
           P+RGT  AKKKYA VCVT PTARICR
Sbjct: 83  PKRGTEGAKKKYAVVCVTMPTARICR 108


>sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
           Short=PSII-T; AltName: Full=Light-regulated unknown 11
           kDa protein; Flags: Precursor gi|18512|emb|CAA38027.1|
           hypothetical protein [Gossypium hirsutum]
          Length = 105

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = -3

Query: 508 RGVVVVRASKDSDN---MVAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXAIEPQRGTA 338
           R +VV  A+K +      ++   K EGNN RR++MF               A EP+RG+A
Sbjct: 26  RRLVVANAAKGAQVESVQMSGERKTEGNNGRREMMFAAAAAAICSVAGVATA-EPKRGSA 84

Query: 337 EAKKKYAPVCVTNPTARICR 278
           EAKK YAPVCVT PTARICR
Sbjct: 85  EAKKAYAPVCVTMPTARICR 104


>ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223547402|gb|EEF48897.1|
           Photosystem II 5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 106

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
 Frame = -3

Query: 532 KQNLTTAHRGVVVVRASKDSDNM---VAPNTKEEGNNTRRDLMFXXXXXXXXXXXXXXXA 362
           +Q  T   RG++V +ASK ++     V    KEE ++ RRDL+F               A
Sbjct: 18  RQPFTAPRRGLIVAKASKVTEGERVNVEMKNKEESSSGRRDLVFAAAAAAAFSVAKVAMA 77

Query: 361 IEPQRGTAEAKKKYAPVCVTNPTARIC 281
            EP+ GT +AKKKYA +CV+ PTA+IC
Sbjct: 78  DEPKAGTLDAKKKYASICVSMPTAKIC 104


>gb|ABD91572.1| unknown [Brassica rapa]
          Length = 106

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
 Frame = -3

Query: 517 TAHRGVVVVRASK-DSDNMVAPNTKEEGNNT--RRDLMFXXXXXXXXXXXXXXXAIE--P 353
           T+ R + VVRASK ++   +   TKEE ++T  RRDLMF               A E  P
Sbjct: 21  TSGRRMSVVRASKSENTTSLEVKTKEEQSSTTMRRDLMFTAAAAAVCALAKAAMADEEEP 80

Query: 352 QRGTAEAKKKYAPVCVTNPTARICRY 275
           +RGT  AKKKYA VCVT PTA+ICRY
Sbjct: 81  KRGTEAAKKKYAQVCVTMPTAKICRY 106


>ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]
           gi|21542450|sp|Q39195.2|PST2_ARATH RecName:
           Full=Photosystem II 5 kDa protein, chloroplastic;
           Short=PSII-T; AltName: Full=Nuclear encoded psbT;
           AltName: Full=PsbTn; Flags: Precursor
           gi|11692868|gb|AAG40037.1|AF324686_1 MSA6 [Arabidopsis
           thaliana] gi|11908024|gb|AAG41441.1|AF326859_1 unknown
           protein [Arabidopsis thaliana]
           gi|12642844|gb|AAK00364.1|AF339682_1 unknown protein
           [Arabidopsis thaliana] gi|11994265|dbj|BAB01448.1|
           photosystem II 5 kD protein precursor [Arabidopsis
           thaliana] gi|17065058|gb|AAL32683.1| photosystem II 5 kD
           protein precursor [Arabidopsis thaliana]
           gi|20260032|gb|AAM13363.1| photosystem II 5 kD protein
           precursor [Arabidopsis thaliana]
           gi|21593345|gb|AAM65294.1| photosystem II [Arabidopsis
           thaliana] gi|332642933|gb|AEE76454.1| photosystem II
           subunit T [Arabidopsis thaliana]
          Length = 103

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/84 (50%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = -3

Query: 517 TAHRGVVVVRASKDSDNMVAPNTKEEGNNT-RRDLMFXXXXXXXXXXXXXXXAIE--PQR 347
           T  R + VVRAS  SDN  +   KE+ + T RRDLMF               A E  P+R
Sbjct: 21  TGGRRLSVVRAST-SDNTPSLEVKEQSSTTMRRDLMFTAAAAAVCSLAKVAMAEEEEPKR 79

Query: 346 GTAEAKKKYAPVCVTNPTARICRY 275
           GT  AKKKYA VCVT PTA+ICRY
Sbjct: 80  GTEAAKKKYAQVCVTMPTAKICRY 103