BLASTX nr result
ID: Rehmannia24_contig00008809
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00008809
(565 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY07366.1| Adenine nucleotide alpha hydrolases-like superfam... 50 1e-11
gb|EOY05822.1| Uncharacterized protein TCM_020722 [Theobroma cacao] 50 9e-11
gb|EOY01950.1| Uncharacterized protein TCM_011728 [Theobroma cacao] 53 1e-10
gb|EOY18934.1| Uncharacterized protein TCM_043452 [Theobroma cacao] 60 2e-10
gb|EOY27458.1| Leucine-rich repeat transmembrane protein kinase ... 46 7e-10
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 38 2e-09
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 40 3e-09
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 40 4e-09
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 40 4e-09
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 41 4e-09
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 39 1e-08
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 40 1e-08
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 40 1e-08
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 37 2e-08
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 39 2e-08
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 39 2e-08
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 37 6e-08
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 36 1e-07
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 40 1e-07
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 40 1e-07
>gb|EOY07366.1| Adenine nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao]
Length = 434
Score = 50.4 bits (119), Expect(3) = 1e-11
Identities = 28/44 (63%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Frame = -3
Query: 275 VVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 159
VVKIKM DGV R+LGGVAYVPKM NLIS +DS ++CD
Sbjct: 308 VVKIKMFDGVVRSLGGVAYVPKMHKNLISLSLLDSKGYGYSACD 351
Score = 38.1 bits (87), Expect(3) = 1e-11
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1
Query: 472 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTC 293
GD+C LT+S +D +S W LD H+ ++N FDLLQ G L G+ S
Sbjct: 247 GDNCD---VLTISENMDANSD--WYLDFASATHICYQKNCFDLLQEGVTGNLTLGNKSIV 301
Query: 292 RIMRL 278
++M L
Sbjct: 302 KVMGL 306
Score = 25.8 bits (55), Expect(3) = 1e-11
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 159 YSAGGGVLKTTRGGMVLRMR*KYRNLYCL 73
YSA GV+K T+G MVL + LY L
Sbjct: 347 YSACDGVVKVTQGDMVLMRGNLHNGLYHL 375
>gb|EOY05822.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
Length = 218
Score = 50.4 bits (119), Expect(3) = 9e-11
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 5/46 (10%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 159
+ VVKIKM DGV +LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 90 LAVVKIKMFDGVVLSLGGVAYVPKMRKNLISLSLLDSKGYGYSACD 135
Score = 35.4 bits (80), Expect(3) = 9e-11
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = -1
Query: 445 LTVSTRIDTSSRD*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRIMRL 278
LT+S +D + W LDS H+ +++ FDLLQ AG L G+ S ++M L
Sbjct: 37 LTISEDMDANFD--WYLDSASATHICYQKDCFDLLQEGMAGNLTLGNKSIVKVMGL 90
Score = 25.8 bits (55), Expect(3) = 9e-11
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 159 YSAGGGVLKTTRGGMVLRMR*KYRNLYCL 73
YSA GV+K T+G MVL + LY L
Sbjct: 131 YSACDGVVKVTQGDMVLMRGNLHNGLYRL 159
>gb|EOY01950.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
Length = 176
Score = 53.1 bits (126), Expect(3) = 1e-10
Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 5/46 (10%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS-----NSCD 159
I VVKIKM DGV R+LGGVAYVPKMR NLIS +DS ++CD
Sbjct: 48 IRVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGFGYSACD 93
Score = 32.7 bits (73), Expect(3) = 1e-10
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 403 WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRIMRLEW*KSK 260
W LDS H+ +++ FDLLQ AG L G+ S ++M + K K
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIK 54
Score = 25.8 bits (55), Expect(3) = 1e-10
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 159 YSAGGGVLKTTRGGMVLRMR*KYRNLYCL 73
YSA GV+K T+G MVL + LY L
Sbjct: 89 YSACDGVVKVTQGDMVLMRGNLHNGLYRL 117
>gb|EOY18934.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
Length = 166
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQL 150
IGVVKIKM DGV R+LGGVAYVPKMR NLIS +DS DI L
Sbjct: 48 IGVVKIKMFDGVVRSLGGVAYVPKMRKNLISLSLLDSKGSDITL 91
Score = 30.8 bits (68), Expect(2) = 2e-10
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 403 WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRIM 284
W LDS H+ +++ FDLLQ G L G+ S ++M
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEVVVGNLTLGNKSIVKVM 46
>gb|EOY27458.1| Leucine-rich repeat transmembrane protein kinase [Theobroma cacao]
Length = 1179
Score = 45.8 bits (107), Expect(3) = 7e-10
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 275 VVKIKMGDGVDRTLGGVAYVPKMRMNLIS 189
VVKIKM DGV R+L G+AYVPKMR NLIS
Sbjct: 1078 VVKIKMFDGVVRSLDGMAYVPKMRKNLIS 1106
Score = 40.0 bits (92), Expect(3) = 7e-10
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = -1
Query: 472 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTC 293
GD C LT+S +D +S W L+S H+ +++ FDLLQ AG L G+ S
Sbjct: 1017 GDDCD---VLTISENMDANSY--WYLNSASATHICYQKDCFDLLQEGVAGNLTLGNKSIV 1071
Query: 292 RIMRLEW*KSK 260
++M LE K K
Sbjct: 1072 KVMGLEVVKIK 1082
Score = 22.7 bits (47), Expect(3) = 7e-10
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 159 YSAGGGVLKTTRGGMVLRMR*KYRNLYCL 73
YSA GV+K T+ MVL + LY L
Sbjct: 1117 YSACDGVVKVTQRDMVLMRGNLHNGLYHL 1145
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 38.1 bits (87), Expect(3) = 2e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 250 IGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285
Score = 35.4 bits (80), Expect(3) = 2e-09
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F + + G + GD + C +
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEV 247
Score = 33.1 bits (74), Expect(3) = 2e-09
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ KY NLY L + I G+
Sbjct: 290 KYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGN 328
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 39.7 bits (91), Expect(3) = 3e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 341 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 36.2 bits (82), Expect(3) = 3e-09
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F ++ + G + GD + C +
Sbjct: 298 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEV 338
Score = 30.4 bits (67), Expect(3) = 3e-09
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGN 419
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 39.7 bits (91), Expect(3) = 4e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 326 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361
Score = 36.2 bits (82), Expect(3) = 4e-09
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F ++ + G + GD + C +
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEV 323
Score = 30.0 bits (66), Expect(3) = 4e-09
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 366 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 404
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 39.7 bits (91), Expect(3) = 4e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 158 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193
Score = 36.2 bits (82), Expect(3) = 4e-09
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F ++ + G + GD + C +
Sbjct: 115 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEV 155
Score = 30.0 bits (66), Expect(3) = 4e-09
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 198 KYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGN 236
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 40.8 bits (94), Expect(3) = 4e-09
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS+C +D
Sbjct: 307 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342
Score = 35.4 bits (80), Expect(3) = 4e-09
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F + + G + GD + C +
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEV 304
Score = 29.6 bits (65), Expect(3) = 4e-09
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 347 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 385
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 38.5 bits (88), Expect(3) = 1e-08
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSC 162
I ++IKM G+ RTL V +VPK+ NLI +DSN C
Sbjct: 276 IHXIQIKMHGGIIRTLTNVRHVPKLNKNLIFLRTLDSNGC 315
Score = 35.4 bits (80), Expect(3) = 1e-08
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 421 TSSRD*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRIM 284
T+S D WILDSGC H+ ++F Q G + G+ C+++
Sbjct: 229 TNSDDEWILDSGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVV 274
Score = 30.4 bits (67), Expect(3) = 1e-08
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 159 YSAGGGVLKTTRGGMVLRMR*KYRNLY 79
Y AGGGVL+ ++GG+V+ K LY
Sbjct: 317 YKAGGGVLRVSKGGLVVMNGKKINGLY 343
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 39.7 bits (91), Expect(3) = 1e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 548 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583
Score = 34.7 bits (78), Expect(3) = 1e-08
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WIL++ C+ H+ R++F + + G + GD + C +
Sbjct: 505 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEV 545
Score = 29.6 bits (65), Expect(3) = 1e-08
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 588 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 626
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 39.7 bits (91), Expect(3) = 1e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 341 IGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 34.7 bits (78), Expect(3) = 1e-08
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WIL++ C+ H+ R++F + + G + GD + C +
Sbjct: 298 DQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEV 338
Score = 29.6 bits (65), Expect(3) = 1e-08
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 419
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 37.0 bits (84), Expect(3) = 2e-08
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D W+LD+GC H+ R++F + + G + GD + C++
Sbjct: 240 DEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKV 280
Score = 37.0 bits (84), Expect(3) = 2e-08
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
+G ++IKM DG RTL V ++P ++ NLIS +D
Sbjct: 283 VGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLD 318
Score = 29.6 bits (65), Expect(3) = 2e-08
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
RYS G G+LK T+G + V++ K +LY L + I G+
Sbjct: 323 RYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGN 361
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 38.5 bits (88), Expect(3) = 2e-08
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 173 IGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 35.4 bits (80), Expect(3) = 2e-08
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F + + G + GD + C +
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEV 170
Score = 29.6 bits (65), Expect(3) = 2e-08
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 251
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 38.5 bits (88), Expect(3) = 2e-08
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG+V+IKM DG TL V ++P ++ +LIS C +D
Sbjct: 173 IGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208
Score = 35.4 bits (80), Expect(3) = 2e-08
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ C H+ R++F + + G + GD + C +
Sbjct: 130 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEV 170
Score = 29.6 bits (65), Expect(3) = 2e-08
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 213 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 251
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 36.6 bits (83), Expect(4) = 6e-08
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCR 290
D WILDSGC H+ R++F Q G+++ G+ + C+
Sbjct: 223 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCK 262
Score = 34.7 bits (78), Expect(4) = 6e-08
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS 171
IG +K++ DG R L V YVPK++ NLIS ++S
Sbjct: 266 IGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALES 302
Score = 25.4 bits (54), Expect(4) = 6e-08
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 561 CYRYHEKDHVKRNCPRRKK 505
C HEK H K++CP+ +K
Sbjct: 171 CAFCHEKGHWKKDCPKLQK 189
Score = 23.9 bits (50), Expect(4) = 6e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 144 GVLKTTRGGMVLRMR*KYRNLYCLVTSRIAGS*ARQKASREQ 19
G+LK T G +V+ NLY S + G+ A +S ++
Sbjct: 312 GILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKK 353
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 36.2 bits (82), Expect(3) = 1e-07
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRIMRLE 275
D WILD+ C H+ R++F + + G + GD + C + +E
Sbjct: 298 DQWILDTACTYHMCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVE 342
Score = 36.2 bits (82), Expect(3) = 1e-07
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
+ V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 341 VETVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376
Score = 28.5 bits (62), Expect(3) = 1e-07
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY + + I G+
Sbjct: 381 KYSGGDGILKVTKGSLVVMKADIKSANLYHVRGTTILGN 419
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 39.7 bits (91), Expect(3) = 1e-07
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 376 IGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411
Score = 31.2 bits (69), Expect(3) = 1e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ H+ R++F + + G + GD + C +
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEV 373
Score = 29.6 bits (65), Expect(3) = 1e-07
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 416 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 454
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 39.7 bits (91), Expect(3) = 1e-07
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 281 IGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 174
IG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 376 IGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411
Score = 31.2 bits (69), Expect(3) = 1e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 409 D*WILDSGCVMHVYSRRNYFDLLQLQRAGILFSGDGSTCRI 287
D WILD+ H+ R++F + + G + GD + C +
Sbjct: 333 DQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEV 373
Score = 29.6 bits (65), Expect(3) = 1e-07
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 162 RYSAGGGVLKTTRGGM-VLRMR*KYRNLYCLVTSRIAGS 49
+YS G G+LK T+G + V++ K NLY L + I G+
Sbjct: 416 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGN 454