BLASTX nr result
ID: Rehmannia24_contig00008521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00008521
(3246 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 624 e-176
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 620 e-174
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 570 e-159
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 549 e-153
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 546 e-152
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 546 e-152
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 545 e-152
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 518 e-144
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 511 e-142
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 502 e-139
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 492 e-136
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 489 e-135
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 486 e-134
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 481 e-133
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 479 e-132
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 470 e-129
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 445 e-122
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 442 e-121
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 416 e-120
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 437 e-119
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 624 bits (1610), Expect = e-176
Identities = 342/1005 (34%), Positives = 546/1005 (54%), Gaps = 18/1005 (1%)
Frame = +1
Query: 37 VYGLNDRAERRPLWQNLKDTKEAVTIPWILMGDFNSVLFSEERRNGAPVSPYEVKDFEEV 216
VYGL+ A+R+ LW L + P I++GDFN+V S +R G V+ E +DF++
Sbjct: 106 VYGLHTIADRKSLWSGLLQCVQQQD-PMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQF 164
Query: 217 CSILGLTDLPSTGLFFTWTNLT-----VWSKLDRALVDNAWLLADFRSEVEFLPSGTSDH 381
L + ST +++W+N + V S++D+A V+ WL V++LP G SDH
Sbjct: 165 LLQSNLIESRSTWSYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDH 224
Query: 382 SPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYRGTAQFTLCRKLKGLKAD 561
SP + +++ P+++ N++AE F V W + LK +K +
Sbjct: 225 SPLLFNLMTGRPQGGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIWLNLKAVKRE 284
Query: 562 LKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVFLCKAEKMF 741
LK++ Q +VKN +++L+DLQ Q N++ +++ + D+ E
Sbjct: 285 LKQMKTQKIGLAHEKVKNLRHQLQDLQSQDDFDHNDI-MQTDAKSIMNDLRHWSHIEDSI 343
Query: 742 YQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAAEFVSYYKS 921
QQK++ +L Q D +K F VK N I ++ EDG EV E + +YK
Sbjct: 344 LQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEFYKK 403
Query: 922 LLGTKQHT-EPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISDEKSPGPDGYSS 1098
LLGT+ T +D V G CL + L R + EI +AL I ++K+PG DG+++
Sbjct: 404 LLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNA 463
Query: 1099 NFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDYRPISCCNVI 1278
FFKKSW + +++ +QEFF + + + ++ V+ L+PK +A V ++RPI+CC VI
Sbjct: 464 YFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVI 523
Query: 1279 YKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKI 1458
YKII+K+L R+ ++ +++ AQ FI GR+I +NI L EL+R Y RK SPRC +K+
Sbjct: 524 YKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKV 583
Query: 1459 DLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQ 1638
D+RKA+DSV WSFL+ +L GFP F WI++CV++ S+S+ +NG F+ KGLRQ
Sbjct: 584 DIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQ 643
Query: 1639 GDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDPTSV 1815
GDP+SP+LF +C+EYLSR L + K FNFHP C L ITHL++ADDL++ R D +S+
Sbjct: 644 GDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSL 703
Query: 1816 QILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIPLAA 1995
+ F SGL + KSNIY VD+ + + G +PFRYLG+PL +
Sbjct: 704 DHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTS 763
Query: 1996 ERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTK 2175
++L +PL+ I++ W + LSYAGR +L++S+L ++ +W +FP+ +V
Sbjct: 764 KKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQA 823
Query: 2176 IIQLCRRYLW-----DNGKVCIAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHGQK 2340
+ ++CR++LW + K +AW T+ PK+ GG + ++K WN+A + K LW I ++
Sbjct: 824 VEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKR 883
Query: 2341 DTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLTYWR 2520
D LW RW+H Y++ Q + N+ N + +++ I+ RD L + + W
Sbjct: 884 DKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHL------------SNIGDWD 931
Query: 2521 DGLPGT--GSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRLG-- 2688
+ G + AY+ G V W ++ PK FILW+ H R+ T DR+
Sbjct: 932 EICIGDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRW 991
Query: 2689 FMELDVNCVYCSQHRETAAHLFFECPFSKQVWTEIRSWMGITRQMSTLRSALKWMKKEAK 2868
++ D+N C ET HLFF C +S VW++I M + + + + +A+
Sbjct: 992 GVQCDLNYRLCRNDGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQAR 1051
Query: 2869 GSGWRAKGQKAGLAST--VYHIWNARNRLIFEKETPVVDKIVKQI 2997
+ KG+ + T VY IW RN+ F E ++++++I
Sbjct: 1052 ----KKKGKLIVMLYTEFVYAIWKQRNKRTFTGENKDENEVLRKI 1092
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 620 bits (1598), Expect = e-174
Identities = 347/996 (34%), Positives = 549/996 (55%), Gaps = 18/996 (1%)
Frame = +1
Query: 22 FFASFVYGLNDRAERRPLWQNLKDTKEAVTIPWILMGDFNSVLFSEERRNGAPVSPYEVK 201
F + VYGL+ A+R+ LW+ L + P IL+GD+N+V +++R NG VS E
Sbjct: 103 FKMAAVYGLHTIADRKVLWEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETS 162
Query: 202 DFEEVCSILGLTDLPSTGLFFTWTNLTVW-----SKLDRALVDNAWLLADFRSEVEFLPS 366
D L + P+TGLF++W N ++ S++D++ V+ AW+ VE+ +
Sbjct: 163 DLRSFVLKAQLLEAPTTGLFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREA 222
Query: 367 GTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYRGTAQFTLCRKLK 546
G SDHSP I ++ P+++ N LA+ F +V + W + +L+
Sbjct: 223 GISDHSPLIFNLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQ 282
Query: 547 GLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVFLCK 726
+K LK + + FS +V+ + +L +Q + S+L E KD++ +
Sbjct: 283 AVKRALKSFHSKKFSKAHCQVEELRRKLAAVQAL-----PEVSQVSELQEEEKDLIAQLR 337
Query: 727 A----EKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVA 894
++ +QK++ +L D +KFF +K RN I + + G + E+
Sbjct: 338 KWSTIDESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQ 397
Query: 895 AEFVSYYKSLLGTKQ-HTEPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISDEK 1071
E ++Y+ LLGT E ID +V G L A+L +PI QEI AL +I D K
Sbjct: 398 NEICNFYRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTK 457
Query: 1072 SPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDY 1251
+PG DG++S FFKKSW ++ +++ + +FF +G + K ++ T + LIPK D A DY
Sbjct: 458 APGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDY 517
Query: 1252 RPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKR 1431
RPI+CC+ +YKII+KIL RL +V+ ++D AQ FI R+I +NI L EL+R YNR+
Sbjct: 518 RPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRH 577
Query: 1432 SSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGF 1611
SPRC IK+D+RKA+DSV W FL+ ML+ LGFP F WI+ CV + S+SI +NG
Sbjct: 578 VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIP 637
Query: 1612 FKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYADDLML 1788
F +KGLRQGDPLSP+LF + +EYLSR + + FNFHP C +++THL++ADDL++
Sbjct: 638 FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697
Query: 1789 LSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPF 1968
+R D +S+ +M F SGL +I KS IY V + E + Q+ G++PF
Sbjct: 698 FARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPF 757
Query: 1969 RYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVF 2148
RYLG+PLA+++L +PL++KI++ GW + LSYAGR +LV+++L ++ +W +F
Sbjct: 758 RYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817
Query: 2149 PIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEGGLGLRDLKTWNQALLTK 2313
P+P ++ + CR++LW + K +AWD L PK+ GGL + ++ WN+A + K
Sbjct: 818 PLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILK 877
Query: 2314 NLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGGSVQL 2493
LW I ++D LW RWV+ Y++ Q + + V ++ S +++ I +R +L+ GG
Sbjct: 878 LLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESR-ELLTRTGG---- 932
Query: 2494 AEAKLTYWRDGLPGTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLT 2673
EA + + T Y+ + V W ++ PK FILWL R+ T
Sbjct: 933 WEAVSNHMNFSIKKT-----YKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLAT 987
Query: 2674 KDRLGFMELDVN--CVYCSQHRETAAHLFFECPFSKQVWTEIRSWMGITRQMSTLRSALK 2847
+R+ DV+ C C ET HLFF C +SK++W ++ ++ + Q + ++ +
Sbjct: 988 AERVSRWNRDVSPLCKMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQ-ADAQAKKE 1046
Query: 2848 WMKKEAKGSGWRAKGQKAGLASTVYHIWNARNRLIF 2955
K+A+ + R K +VY IW RN +F
Sbjct: 1047 LAIKKARSTKDRNKLYVMMFTESVYAIWLLRNAKVF 1082
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 570 bits (1470), Expect = e-159
Identities = 364/1096 (33%), Positives = 536/1096 (48%), Gaps = 99/1096 (9%)
Frame = +1
Query: 19 QFFASFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGAPVSP 189
+F +FVY +N R RR LW L+ T PWI++GDFN L + G
Sbjct: 102 EFVVTFVYAVNCRYGRRRLWSELELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRIT 161
Query: 190 YEVKDFEEVCSILGLTDLPSTGLFFTW----TNLTVWSKLDRALVDNAWLLADFRSEVEF 357
+++F E ++DLP G +TW N + K+DR LV+++WL+A S F
Sbjct: 162 RGMEEFRECLLTSNISDLPFRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSF 221
Query: 358 LPSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQR-HYRGTAQFTLC 534
SDH P V+I + P++ N L H F + W R Y+G+A FTL
Sbjct: 222 CAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLS 281
Query: 535 RKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVV 714
+K K LK ++ NR+H+S + RV A L+ Q P++ + E +
Sbjct: 282 KKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSSY-LAGLEKEAHRSWA 340
Query: 715 FLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVA 894
L AE+ F QK++ +L D T FFH ++ N I + + G R + E+
Sbjct: 341 ELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQ 400
Query: 895 AEFVSYYKSLLGTKQHTEPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDA-----LFNI 1059
V ++K L G+ H I + L + E TR +L+ E+ +A F +
Sbjct: 401 THCVDFFKELFGSSSHL--ISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFAL 458
Query: 1060 SDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHT 1239
KSPGPDGY+S FFKK+WSIVG + AVQEFF SG LL Q ++T + ++PK NA
Sbjct: 459 PSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADR 518
Query: 1240 VNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKY 1419
+ ++RPISCCN IYK+I+K+LA RL ++L I +Q AF+KGR + EN+ L EL++ +
Sbjct: 519 ITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGF 578
Query: 1420 NRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGG 1599
+ S R +K+DLRKAFDSV W F+ E L+ PP F NWI QC+TS SFSI+++G
Sbjct: 579 GQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGS 638
Query: 1600 LHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTK-TQSHFNFHPMCGALRITHLVYAD 1776
L G+FKG KGLRQGDPLSP LFVI +E LSRLL+ K + +HP +RI+ L +AD
Sbjct: 639 LCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFAD 698
Query: 1777 DLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRG 1956
DLM+ G +S++ + L F SGL MN KS +Y A +++ D E L + G
Sbjct: 699 DLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNG 757
Query: 1957 TMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFW 2136
T PFRYLG+PL +L+ Y L++KI++ N W++ TLS+AGR +L+ SV+ FW
Sbjct: 758 TFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFW 817
Query: 2137 MSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEGGLGLRDLKT---- 2289
+S F +P I Q+C R+LW N G + ++W CLPK EGGLGLR+ T
Sbjct: 818 LSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKT 877
Query: 2290 -------------------WNQA--LLTKNLWNI-------------------------- 2328
WN A L N WN
Sbjct: 878 LNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRG 937
Query: 2329 ---HGQKDTLWY-RW-------------------VHHTYL--RAQTVWDWNVKNSDSPLI 2433
+GQ + WY W +H + + A + W + S
Sbjct: 938 AVGNGQLLSYWYDHWSNLGPLIEAIGASGPQLTGIHESAVVTEASSSTGW-ILPSARTRN 996
Query: 2434 KNILNTRDQLIAECGGSVQLAEAKLTYWRDGLPGTG--SRDAYQFFRPKGTIVPWTNVVW 2607
++ N R L+ S E T++ +G T S+ ++ R + T W VW
Sbjct: 997 ASLANLRSTLLNSPAPSGDRGEDTYTWYIEGSSSTSFSSKLTWECLRQRDTTKLWAAAVW 1056
Query: 2608 GRSIPPKHSFILWLCTHGRVLTKDRLGFMELDVN--CVYCSQHRETAAHLFFECPFSKQV 2781
+ PK++F W+ R+ + R + C C + ET HLF C +
Sbjct: 1057 YKGCIPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLI 1116
Query: 2782 WTEIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVYHIWNARNRLIFEK 2961
W ++ + G ++ + ++WM +GS + +K + + ++HIW RN +
Sbjct: 1117 WQQVLARFGRSQMFREWKDIIEWMLSN-QGS-FSGTLKKLAVQTAIFHIWKERNSRLHSA 1174
Query: 2962 ETPVVDKIVKQIKTQV 3009
+ I KQI +
Sbjct: 1175 MSASHTAIFKQIDRSI 1190
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 549 bits (1415), Expect = e-153
Identities = 329/878 (37%), Positives = 493/878 (56%), Gaps = 25/878 (2%)
Frame = +1
Query: 31 SFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGAPVS---PY 192
S VY N+ A R+ LW + + + I PW+++GDFN VL +E N PVS
Sbjct: 107 SVVYAANEVASRKELWIEIVNMVVSGIIGDRPWLVLGDFNQVLNPQEHSN--PVSLNVDI 164
Query: 193 EVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEVEFL 360
++DF + L+DL G FTW N + V K+DR LV+++W A F S +
Sbjct: 165 NMRDFRDCLLAAELSDLRYKGNTFTWWNKSHTTPVAKKIDRILVNDSWN-ALFPSSLGIF 223
Query: 361 PS-GTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGW-QRHYRGTAQFTLC 534
S SDH C V + + A+ P+++FN L ++ +F ++V D W + G++ F +
Sbjct: 224 GSLDFSDHVSCGVVLEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVS 283
Query: 535 RKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVV 714
+KLK LK +K+ +R ++S + R K A + L Q + P ++ +L RK +
Sbjct: 284 KKLKALKKPIKDFSRLNYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHI 343
Query: 715 FLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVA 894
L AE+ F++QK++ ++ + D TK+FH + N I+++ +G SQ +
Sbjct: 344 -LTAAEESFFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGIL 402
Query: 895 AEFVSYYKSLLGTKQHT---EPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISD 1065
SY+ SLLG + E D ++ + C Q EL +++I+ ALF++
Sbjct: 403 DLCASYFGSLLGDEVDPYLMEQNDMNLLLSYRCSPA-QVCELESTFSNEDIRAALFSLPR 461
Query: 1066 EKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVN 1245
KS GPDG+++ FF SWSIVG +VT+A++EFF+SG LLKQ + T I LIPK N +
Sbjct: 462 NKSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTS 521
Query: 1246 DYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNR 1425
D+RPISC N +YK+I ++L RL +L+ +I AQ AF+ GR++ EN+ L +L+ YN
Sbjct: 522 DFRPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNW 581
Query: 1426 KRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLH 1605
SPR +K+DL+KAFDSV W F+ L L P F NWI QC+++P+F++SINGG
Sbjct: 582 SNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNG 641
Query: 1606 GFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQSH-FNFHPMCGALRITHLVYADDL 1782
GFFK KGLRQGDPLSPYLFV+ +E S LL ++ +S ++HP L I+HL++ADD+
Sbjct: 642 GFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDV 701
Query: 1783 MLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTM 1962
M+ G S+ + + L DF + SGL +N KS++Y+A +++ ++ A + GT+
Sbjct: 702 MIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNA-NAAYGFPIGTL 760
Query: 1963 PFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMS 2142
P RYLG+PL +L++ YEPLL KI++ W + LS+AGR +L+ SV+ G FWMS
Sbjct: 761 PIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMS 820
Query: 2143 VFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGLGLRDLKTWNQALL 2307
F +P +I LC R+LW + ++W LCLPK+EGGLGLR L WN+ L
Sbjct: 821 TFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLS 880
Query: 2308 TKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTR----DQLIAEC 2475
+ +W + KD+LW W H +L + W SDS K +L+ R L+ +
Sbjct: 881 MRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKV 940
Query: 2476 GGSVQLAEAKLTYWRDGLPGTGSRDAYQFFRPKGTIVP 2589
G + K YW D G FR G I P
Sbjct: 941 GNGL-----KADYWYDNWTSLG-----PLFRIIGDIGP 968
Score = 71.2 bits (173), Expect = 3e-09
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Frame = +1
Query: 2533 GTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRL---GFMELD 2703
G + ++ RPK T+ W + +W + PK++F +W+ R+LT+ RL G ++ D
Sbjct: 1032 GFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSD 1091
Query: 2704 VNCVYCSQHRETAAHLFFECPFSKQVWTEI-RSWMGITRQMSTLRSALKWMKKEAKGSGW 2880
CV CS E+ HL C FS QVW + R R S+ L W+++ + +
Sbjct: 1092 A-CVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEAPP 1150
Query: 2881 RAKGQKAGLASTVYHIWNARNRLI 2952
+ K VY++W RN L+
Sbjct: 1151 LLR--KIVSQVVVYNLWRQRNNLL 1172
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 546 bits (1406), Expect = e-152
Identities = 306/794 (38%), Positives = 458/794 (57%), Gaps = 17/794 (2%)
Frame = +1
Query: 124 LMGDFNSVLFSEERRNGAPVS-PYEVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VW 288
++GDFN VL +E N ++ ++DF S + L+DL G FTW N + +
Sbjct: 1 MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60
Query: 289 SKLDRALVDNAWLLADFRSEVEFLPSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHEN 468
KLDR L +++W S F SDH C V + NG SA+ P+++FN L ++E+
Sbjct: 61 KKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNED 120
Query: 469 FHSIVSDGW-QRHYRGTAQFTLCRKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQ 645
F ++V D W + G++ + + +KLK +K +K+ +R ++S I R K A L Q
Sbjct: 121 FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180
Query: 646 QFHEHPNNLDIKSKLLEVRKDVVFLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNA 825
+P+ + +L RK V+ C AE+ F+ Q+++ ++ + D T +FH +V
Sbjct: 181 LTLANPSVSNAALELEAQRKWVLLSC-AEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRK 239
Query: 826 KRNFIASISREDGTRTCSQGEVAAEFVSYYKSLLGTKQHT---EPIDPTIVGNGPCLDTD 996
N I S+ +G SQ + V+YY+ LLG+ + E D ++ C D
Sbjct: 240 SFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRC-SQD 298
Query: 997 QQAELTRPILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGS 1176
Q +EL + D EIK A ++ K+ GPDGYS FF+ +WSI+G +V A+ EFF SG
Sbjct: 299 QCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQ 358
Query: 1177 LLKQLSNTVIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGA 1356
LLKQ + T + LIPK+ NA T++++RPISC N +YK+I+K+L RL +L+ +I +Q A
Sbjct: 359 LLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSA 418
Query: 1357 FIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPT 1536
F+ GR++ EN+ L E++ YNR SPR +K+DL+KAFDSV W F+ L L P
Sbjct: 419 FLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPER 478
Query: 1537 FNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS 1716
+ NWI QC+T+PSF+IS+NG GFF+ KGLRQGDPLSPYLFV+ +E S+LL ++ S
Sbjct: 479 YINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDS 538
Query: 1717 -HFNFHPMCGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIY 1893
+ ++HP G L I+HL++ADD+M+ G +S+ + + L DF SGL +N KS ++
Sbjct: 539 GYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLF 598
Query: 1894 MAAVDEGDTEAILTSTQ--LTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSS 2067
A +D + +TS GT P RYLG+PL +L++ Y PLL K+S+ + W S
Sbjct: 599 QAGLDLSER---ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVS 655
Query: 2068 STLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW----DNGKVC-IAW 2232
LS+AGRT+L+ SV+ G+ FWMS F +P KI LC ++LW D K ++W
Sbjct: 656 KALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715
Query: 2233 DTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVK 2412
CLPK+EGGLG R WN+ LL + +W + + +LW +W H L + W N
Sbjct: 716 VDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNAL 775
Query: 2413 NSDSPLIKNILNTR 2454
+D K +LN R
Sbjct: 776 QTDPWTWKMLLNLR 789
Score = 63.2 bits (152), Expect = 7e-07
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Frame = +1
Query: 2533 GTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFMEL--DV 2706
G + ++ RP+ + W VW + PKH+F W R+ T+ RL L
Sbjct: 891 GFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSA 950
Query: 2707 NCVYCSQHRETAAHLFFECPFSKQVWTEI-RSWMGITRQMSTLRSALKWMKKEAKGSGWR 2883
C CS ET HL C FS QVW + R + T L W ++ +
Sbjct: 951 ECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSL 1010
Query: 2884 AKGQKAGLASTVYHIWNARNRLI 2952
+ A L VY++W RN ++
Sbjct: 1011 LRKVVAQL--VVYNLWRQRNLVL 1031
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 546 bits (1406), Expect = e-152
Identities = 306/794 (38%), Positives = 458/794 (57%), Gaps = 17/794 (2%)
Frame = +1
Query: 124 LMGDFNSVLFSEERRNGAPVS-PYEVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VW 288
++GDFN VL +E N ++ ++DF S + L+DL G FTW N + +
Sbjct: 1 MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60
Query: 289 SKLDRALVDNAWLLADFRSEVEFLPSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHEN 468
KLDR L +++W S F SDH C V + NG SA+ P+++FN L ++E+
Sbjct: 61 KKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNED 120
Query: 469 FHSIVSDGW-QRHYRGTAQFTLCRKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQ 645
F ++V D W + G++ + + +KLK +K +K+ +R ++S I R K A L Q
Sbjct: 121 FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180
Query: 646 QFHEHPNNLDIKSKLLEVRKDVVFLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNA 825
+P+ + +L RK V+ C AE+ F+ Q+++ ++ + D T +FH +V
Sbjct: 181 LTLANPSVSNAALELEAQRKWVLLSC-AEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRK 239
Query: 826 KRNFIASISREDGTRTCSQGEVAAEFVSYYKSLLGTKQHT---EPIDPTIVGNGPCLDTD 996
N I S+ +G SQ + V+YY+ LLG+ + E D ++ C D
Sbjct: 240 SFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRC-SQD 298
Query: 997 QQAELTRPILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGS 1176
Q +EL + D EIK A ++ K+ GPDGYS FF+ +WSI+G +V A+ EFF SG
Sbjct: 299 QCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQ 358
Query: 1177 LLKQLSNTVIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGA 1356
LLKQ + T + LIPK+ NA T++++RPISC N +YK+I+K+L RL +L+ +I +Q A
Sbjct: 359 LLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSA 418
Query: 1357 FIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPT 1536
F+ GR++ EN+ L E++ YNR SPR +K+DL+KAFDSV W F+ L L P
Sbjct: 419 FLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPER 478
Query: 1537 FNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS 1716
+ NWI QC+T+PSF+IS+NG GFF+ KGLRQGDPLSPYLFV+ +E S+LL ++ S
Sbjct: 479 YINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDS 538
Query: 1717 -HFNFHPMCGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIY 1893
+ ++HP G L I+HL++ADD+M+ G +S+ + + L DF SGL +N KS ++
Sbjct: 539 GYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLF 598
Query: 1894 MAAVDEGDTEAILTSTQ--LTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSS 2067
A +D + +TS GT P RYLG+PL +L++ Y PLL K+S+ + W S
Sbjct: 599 QAGLDLSER---ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVS 655
Query: 2068 STLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW----DNGKVC-IAW 2232
LS+AGRT+L+ SV+ G+ FWMS F +P KI LC ++LW D K ++W
Sbjct: 656 KALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715
Query: 2233 DTLCLPKNEGGLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVK 2412
CLPK+EGGLG R WN+ LL + +W + + +LW +W H L + W N
Sbjct: 716 VDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNAL 775
Query: 2413 NSDSPLIKNILNTR 2454
+D K +LN R
Sbjct: 776 QTDPWTWKMLLNLR 789
Score = 63.2 bits (152), Expect = 7e-07
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Frame = +1
Query: 2533 GTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRLGFMEL--DV 2706
G + ++ RP+ + W VW + PKH+F W R+ T+ RL L
Sbjct: 891 GFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSA 950
Query: 2707 NCVYCSQHRETAAHLFFECPFSKQVWTEI-RSWMGITRQMSTLRSALKWMKKEAKGSGWR 2883
C CS ET HL C FS QVW + R + T L W ++ +
Sbjct: 951 ECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSL 1010
Query: 2884 AKGQKAGLASTVYHIWNARNRLI 2952
+ A L VY++W RN ++
Sbjct: 1011 LRKVVAQL--VVYNLWRQRNLVL 1031
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 545 bits (1403), Expect = e-152
Identities = 318/875 (36%), Positives = 470/875 (53%), Gaps = 34/875 (3%)
Frame = +1
Query: 19 QFFASFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGA--PV 183
+FF SFVY N ER+ LW LKD ++ I PW L+GDFN L E P+
Sbjct: 101 EFFCSFVYASNYVEERKVLWSELKDHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPM 160
Query: 184 SPYEVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEV 351
++DF++V + LTD+ + G FTW N + KLDR L+++ W +S
Sbjct: 161 VTPGMRDFQQVINYCSLTDMAAQGPLFTWCNKREHGLIMKKLDRVLINDCWNQTFSQSYS 220
Query: 352 EFLPSGTSDHSPCIVSI---LDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRH----YR 510
F G SDH C +S+ N P+++ N L + E+F +VS W+
Sbjct: 221 VFEAGGCSDHLRCRISLNSEAGNKVQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILS 280
Query: 511 GTAQFTLCRKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKL 690
+ F + LKGLK ++ + R ++S + A L Q +P+++ ++ +
Sbjct: 281 TSTLFRFSKNLKGLKPKIRSMARDRLGNLSKKANEAYKILCAKQHVNLTNPSSMAMEEEN 340
Query: 691 LEV-RKDVVFLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGT 867
R D V + E+ + +QK+K ++ D+ TK FH N I I DG
Sbjct: 341 AAYSRWDRVAIL--EEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGI 398
Query: 868 RTCSQGEVAAEFVSYYKSLLG---------TKQHTEPIDPTIVGNGPCLDTDQQAELTRP 1020
E+ AE +++ L T + + P C D DQQ+ L RP
Sbjct: 399 VKTKGDEIKAEAERFFREFLQLIPNDFEGVTITELQQLLPV-----RCSDADQQS-LIRP 452
Query: 1021 ILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNT 1200
+ +EI+ LF + +KSPGPDGY+S FFK +W I+G++ T AVQ FFT G L K +++T
Sbjct: 453 VTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINST 512
Query: 1201 VIALIPKSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIV 1380
++ALIPK A + DYRPISCCNV+YK+I+KI+A RL VL I G Q AF+K R ++
Sbjct: 513 ILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLI 572
Query: 1381 ENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQC 1560
EN+ L EL++ Y++ S RC IKID+ KAFDSV W FL + LGFP F +WI C
Sbjct: 573 ENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINIC 632
Query: 1561 VTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPM 1737
+T+ SFS+ +NG L G+F+ +GLRQG LSPYLFVIC++ LS++L K HF +HP
Sbjct: 633 ITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPK 692
Query: 1738 CGALRITHLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGD 1917
C + +THL +ADDLM+LS G S++ ++ +F SGL +++ KS +Y+A +
Sbjct: 693 CKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATA 752
Query: 1918 TEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTE 2097
+ + G +P RYLG+PL +RL PLL ++ I W+S LSYAGR
Sbjct: 753 RNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLN 812
Query: 2098 LVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEG 2262
L+ SVL + FW++ F +P + ++ ++C +LW ++ K I+W +C PK+EG
Sbjct: 813 LISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEG 872
Query: 2263 GLGLRDLKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLI-KN 2439
GLGLR LK N K +W I ++LW +WV LR + W+ S I K
Sbjct: 873 GLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKK 932
Query: 2440 ILNTRDQLIAECGGSVQLAEAKLT-YWRDGLPGTG 2541
+L R+ +A+ V++ K T +W D G
Sbjct: 933 LLKYRE--VAKTLSKVEVGNGKQTSFWYDNWSDLG 965
Score = 74.3 bits (181), Expect = 3e-10
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Frame = +1
Query: 2542 SRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRL--GFMELDVNCV 2715
+RD + R VPW V+W PK+SF WL HGR+ T DR+ + +C+
Sbjct: 1040 TRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCI 1099
Query: 2716 YCSQHRETAAHLFFECPFSKQVWTEIRSWMGITRQMSTLRSALKWM-KKEAKGSGWRAKG 2892
+C ET HLFF C F+ +W ++ + T+ S +S ++ + + W +
Sbjct: 1100 FCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSIIEAITNSQHHRVEWFLR- 1158
Query: 2893 QKAGLASTVYHIWNARNRLIFEKETPVVDKIV----KQIKTQV 3009
+ +T+Y +W RN + ++V KQI+ Q+
Sbjct: 1159 -RYVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDKQIRNQL 1200
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 518 bits (1335), Expect = e-144
Identities = 298/828 (35%), Positives = 447/828 (53%), Gaps = 20/828 (2%)
Frame = +1
Query: 31 SFVYGLNDRAERRPLWQNLKDTKE---AVTIPWILMGDFNSVLFSEERRNGAPVS-PYEV 198
SFVY D R+ LW + D + PW ++GDFN +L E +
Sbjct: 4 SFVYASTDEVTRQILWNEIVDFSNDPCVIDKPWTVLGDFNQILHPSEHSTSDGFNVDRPT 63
Query: 199 KDFEEVCSILGLTDLPSTGLFFTWTN----LTVWSKLDRALVDNAWLLADFRSEVEFLPS 366
+ F E + LTDL G FTW N V KLDR LV++ W S F
Sbjct: 64 RIFRETILLASLTDLSFRGNTFTWWNKRSRAPVAKKLDRILVNDKWTTTFPSSLGLFGEP 123
Query: 367 GTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGW-QRHYRGTAQFTLCRKL 543
SDHS C +S++ ++ P+R+ N L + ENF S++ W G+A + + KL
Sbjct: 124 DFSDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVSVKL 183
Query: 544 KGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHP--NNLDIKSKLLEVRKDVVF 717
K LK +++ +R ++S I R K A + L Q P +N I++ E ++
Sbjct: 184 KALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASPCPSNAAIEA---ETQRKWRI 240
Query: 718 LCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAA 897
L +AE F+ Q+++ N+L + D + +FH + N I +S G R Q +
Sbjct: 241 LAEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLEN 300
Query: 898 EFVSYYKSLLGTKQHTEPIDPTIVGN--GPCLDTDQQAELTRPILDQEIKDALFNISDEK 1071
V Y++S LG++Q + + N QQ L P ++IK+A F++ K
Sbjct: 301 HCVEYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNK 360
Query: 1072 SPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDY 1251
+ GPDG+S FF W I+G +VT A+ EFFTSG LLKQ + T + LIPK NA +++D+
Sbjct: 361 ASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDF 420
Query: 1252 RPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKR 1431
RPISC N +YK+I+K+L RL L I +Q AF+ GR +EN+ L EL+ YN+K
Sbjct: 421 RPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKN 480
Query: 1432 SSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGF 1611
+P +K+DLRKAFDSV W F+ L L P F WIL+C+++ SFS+ +NG G
Sbjct: 481 IAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGH 540
Query: 1612 FKGEKGLRQGDPLSPYLFVICIEYLSRLLKTK-TQSHFNFHPMCGALRITHLVYADDLML 1788
F KGLRQGDP+SPYLFV+ +E S LL+++ T + +HP L I+HL++ADD+M+
Sbjct: 541 FWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMI 600
Query: 1789 LSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPF 1968
G +S+ +++ L DF SGL MN K+ +Y A + + ++++ + S G++P
Sbjct: 601 FFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDS-MASYGFKLGSLPV 659
Query: 1969 RYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVF 2148
RYLG+PL + +L + Y PL+ KI++ N W LS+AGR +L+ SV+ G+ FW+S F
Sbjct: 660 RYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSF 719
Query: 2149 PIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEGGLGLRDLKTWNQALLTK 2313
+P KI LC R+LW + G +AW +CLPK EGG+GLR N+ L +
Sbjct: 720 ILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLR 779
Query: 2314 NLWNIHGQKDTLWYRW-VHHTYLRAQTVWDWNVKNSDSPLIKNILNTR 2454
+W + +LW W H+ ++ + W+ K DS K +L R
Sbjct: 780 MIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLR 827
Score = 65.5 bits (158), Expect = 1e-07
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 2533 GTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRLGF--MELDV 2706
G + + RP VPW VW + PKH+F LW R+ TK RL M++D
Sbjct: 929 GFSAAATWSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASWGMQIDT 988
Query: 2707 NCVYCSQHRETAAHLFFECPFS 2772
C CS H ET HLF C F+
Sbjct: 989 TCGLCSLHPETRDHLFLSCDFA 1010
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 511 bits (1316), Expect = e-142
Identities = 334/1034 (32%), Positives = 508/1034 (49%), Gaps = 38/1034 (3%)
Frame = +1
Query: 19 QFFASFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGA--PV 183
+F SF+Y N ER+ LWQ+L + + +V PW+L GDFN L EE + A P+
Sbjct: 403 EFICSFIYASNFVEERKKLWQDLHNLQNSVAFRNKPWLLFGDFNETLKMEEHSSYAVSPM 462
Query: 184 SPYEVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEV 351
++DF+ V L D+ + G FTW N + KLDR L++ + A S
Sbjct: 463 VTPGMRDFQIVVRYCSLEDMRTHGPLFTWGNKRNEGLICKKLDRVLLNPEYNSAYPHSYC 522
Query: 352 EFLPSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYR----GTA 519
G SDH + + P+++ N++A H F V D W+ +
Sbjct: 523 IMDSGGCSDHLRGRFHLRSAIQKPKGPFKFTNVIAAHPEFMPKVEDFWKNTTELFPSTST 582
Query: 520 QFTLCRKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEV 699
F +KLK LK LK+L+R + S ++ R A EL Q + N DI
Sbjct: 583 LFRFSKKLKELKPILKDLSRNNLSDLTRRATYAYEELCRCQTKSLTTLNPHDIVD----- 637
Query: 700 RKDVVFLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCS 879
E + +++ K +L+ N I + GTR +
Sbjct: 638 ----------ESLAFERWEKERHLL-------------------NAIHEVMDPQGTRPPN 668
Query: 880 QGEVAAEFVSYYKSLLGTKQHTEPIDPTIVGNGPC-------LDTDQQAELTRPILDQEI 1038
Q ++ E V ++ LL + +P D T + +Q L I + E+
Sbjct: 669 QDDIKIEAVRFFSDLLSS----QPSDFTGISVDELKGILQYRYSLHEQNLLVAEITEAEV 724
Query: 1039 KDALFNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIP 1218
F+I KSPGPDGY+ FF+++WS++G++VT A++ FFT G L K L++T++ALIP
Sbjct: 725 MKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIP 784
Query: 1219 KSDNAHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLM 1398
K A + DYRPISCCNV+YK I+K+LA RL +L I Q AFI R ++EN+ L
Sbjct: 785 KRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLA 844
Query: 1399 QELLRKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSF 1578
EL++ Y++ SPRC +KIDL KAFDSV W FL L L P F +WI C+++ SF
Sbjct: 845 SELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASF 904
Query: 1579 SISINGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRI 1755
S+ +N GLRQG LSPYLFVIC+ LS +L K + F +HP C + +
Sbjct: 905 SVQVN-----------GLRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGL 953
Query: 1756 THLVYADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILT 1935
THL +ADD+M+ S G S++ ++ DF A SGL++++ KS ++MA++ +IL
Sbjct: 954 THLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILA 1013
Query: 1936 STQLTRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVL 2115
G++P RYLG+PL +R+ + PLL KI S I+ W + LSYAGR +L+ SV+
Sbjct: 1014 RFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVI 1073
Query: 2116 QGVECFWMSVFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEGGLGLRD 2280
+ FW+S F +P +I Q+ +LW K +AW +C PK+EGGLGLR
Sbjct: 1074 SSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRS 1133
Query: 2281 LKTWNQALLTKNLWNIHGQKDTLWYRWVHHTYLR--AQTVWDWNVKNSDSPLIKNILNTR 2454
L N+ K +W + K +LW W+ + +R A+ + ++ ++ +I
Sbjct: 1134 LVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIRTVAEALSSHRRRSHRDDILNDIEEEL 1193
Query: 2455 DQLIAECGGSVQLAEAKLTYWRDGLPGTGSRDAYQFFRP--------KGTIVPWTNVVWG 2610
++L+ C G + L G + +FF P +G + W +W
Sbjct: 1194 EKLL--CRGICTEQDRSL------CRSIGGQFKAKFFSPEIWHQIREQGLVKQWHKAIWF 1245
Query: 2611 RSIPPKHSFILWLCTHGRVLTKDRLGFMELDVN--CVYCSQHRETAAHLFFECPFSKQVW 2784
PK +FI WL H R+ T D++ ++ CV C+ E+ HLFF C FS +W
Sbjct: 1246 SGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSCNFSSHIW 1305
Query: 2785 TEIRSWMGITRQMSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVYHIWNARNRLIFEKE 2964
+ + + R +T AL + SG + + +T++ +W RN+
Sbjct: 1306 DRLTRRLLLCR-YTTNFPALLLLLSGQDFSGTKRFLLRYVFQATIHTLWRERNKRRHGDL 1364
Query: 2965 TPVVDKIVKQIKTQ 3006
D I+K I Q
Sbjct: 1365 PIPSDHIIKFIDRQ 1378
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 502 bits (1292), Expect = e-139
Identities = 277/804 (34%), Positives = 451/804 (56%), Gaps = 21/804 (2%)
Frame = +1
Query: 16 RQFFASFVYGLNDRAERRPLWQN---LKDTKEAVTIPWILMGDFNSVLFSEERR--NGAP 180
+ F +FVYG N +RR LW++ L T PW+L+GDFN + + E N +
Sbjct: 100 QSFAVAFVYGRNSELDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSL 159
Query: 181 VSPYEVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSE 348
++ ++D + L+DLPS G+FFTW+N + KLDRAL + W +
Sbjct: 160 LNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSAL 219
Query: 349 VEFLPSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYR-GTAQF 525
F P G SDH+PCI+ I + ++ ++YF+ L+ H ++ + +S W+ + G+ F
Sbjct: 220 AVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMF 279
Query: 526 TLCRKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRK 705
+L + LK K + LNR FS+I R + LED+Q + P++ + + + RK
Sbjct: 280 SLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHV-ARK 338
Query: 706 DVVFLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQG 885
+F A + F++QK++ +L + D T+FFH V + N I + +DG R +
Sbjct: 339 QWIFFAAALESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVD 398
Query: 886 EVAAEFVSYYKSLLGTKQHTEPIDPTIVGNGPCL-----DTDQQAELTRPILDQEIKDAL 1050
++ ++YY LLG +E + P V L D+ ++LT ++EI L
Sbjct: 399 QIKGMLIAYYSHLLGIP--SENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVL 456
Query: 1051 FNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDN 1230
F++ K+PGPDG+ FF ++W+IV V A++EFF SG+L + + T I LIPK
Sbjct: 457 FSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTG 516
Query: 1231 AHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELL 1410
A + +RP++CC IYK+IT+I++ RL ++ + Q FIKGR + EN+ L EL+
Sbjct: 517 ADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELV 576
Query: 1411 RKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISI 1590
+ + R +++D+ KA+D+V+W FL +L+ L P F +WI C++S S+SI+
Sbjct: 577 DNFEADGETTRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAF 636
Query: 1591 NGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKT-KTQSHFNFHPMCGALRITHLV 1767
NG L GFF+G+KG+RQGDP+S +LFV+ ++ LS+ L FN HP C A ITHL
Sbjct: 637 NGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLS 696
Query: 1768 YADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQL 1947
+ADD+++ S G +S+ ++ L DF SGL +N K+ + + + ++ + +
Sbjct: 697 FADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGI 756
Query: 1948 TRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVE 2127
T G++P RYLG+PL +++++ Y+PL+++I+S W++ LS+AGR +L++SV+
Sbjct: 757 THGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTI 816
Query: 2128 CFWMSVFPIPAEVRTKIIQLCRRYLWDNGK-----VCIAWDTLCLPKNEGGLGLRDLKTW 2292
FW SVF P + K+ Q+C +LW I+W+ +C PK GGLGL+ L +W
Sbjct: 817 NFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSW 876
Query: 2293 NQALLTKNLWNIHGQKDTLWYRWV 2364
N+ L K +W + +LW WV
Sbjct: 877 NRILALKLIWLLFTSAGSLWVSWV 900
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 492 bits (1266), Expect = e-136
Identities = 291/798 (36%), Positives = 432/798 (54%), Gaps = 21/798 (2%)
Frame = +1
Query: 22 FFASFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGAPVSPY 192
F S VY N+ R+ LW L + + WI++GDFN +L E N
Sbjct: 104 FVVSIVYASNEEGTRKELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINAN--IGR 161
Query: 193 EVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEVEFL 360
+++ F L DL G +TW N + K+DR LV++ W + F
Sbjct: 162 KIRAFRSCLLDSDLYDLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFG 221
Query: 361 PSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQR-HYRGTAQFTLCR 537
SDHS C V + A+ P+R+FN + +F ++ + W + G+A + + +
Sbjct: 222 EPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSK 281
Query: 538 KLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVF 717
KLK LK + +R+++S I RV A + Q+ +P+ + +L RK +
Sbjct: 282 KLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQI- 340
Query: 718 LCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAA 897
L KAE+ F+ QK+ ++L + D T +FH + N I + + G R +Q +
Sbjct: 341 LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKE 400
Query: 898 EF----VSYYKSLLGTKQHTEPI---DPTIVGNGPCLDTDQQAELTRPILDQEIKDALFN 1056
++++SLL + + D ++ + C DQ +L R D +I++A F+
Sbjct: 401 GIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRC-SVDQINDLERSFSDLDIQEAFFS 459
Query: 1057 ISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAH 1236
+ K+ GPDGYSS FFK W +VG +VT AVQEFF SG LLKQ + T + LIPK N+
Sbjct: 460 LPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSS 519
Query: 1237 TVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRK 1416
+ D+RPISC N +YK+I K+L RL +LN +I +Q AF+ GR + EN+ L E++
Sbjct: 520 KMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHG 579
Query: 1417 YNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISING 1596
YN K S R +K+DLRKAFDSV W F+ L P F WI QC+++P FS+ +NG
Sbjct: 580 YNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNG 639
Query: 1597 GLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYA 1773
GFFK KGLRQGDPLSPYLFV+ +E S LLK + + + ++HP L I+HL++A
Sbjct: 640 SSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFA 699
Query: 1774 DDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTR 1953
DD+M+ G +S+ + + L DF + SGLH+N K+N+Y+A DE + AI +
Sbjct: 700 DDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAI-SHYGFPI 758
Query: 1954 GTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECF 2133
T+P RYLG+PL + +LK+ YE L+ + S W+ +LS+AGR +L+ SV+ G+ F
Sbjct: 759 STLPIRYLGLPLMSRKLKISEYE-LVKRFRS----WAVKSLSFAGRVQLITSVITGLVNF 813
Query: 2134 WMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGLGLRDLKTWNQ 2298
WMS F + KI LC R+LW IAW +CLPKNEGG+GLR WN+
Sbjct: 814 WMSTFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVGLRRFTPWNK 873
Query: 2299 ALLTKNLWNIHGQKDTLW 2352
+ +W + D LW
Sbjct: 874 TFYLRFIWPLFADNDVLW 891
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 489 bits (1259), Expect = e-135
Identities = 290/798 (36%), Positives = 430/798 (53%), Gaps = 21/798 (2%)
Frame = +1
Query: 22 FFASFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGAPVSPY 192
F S VY N+ R+ LW L + + WI++GDFN +L E N
Sbjct: 104 FVVSIVYASNEEGTRKELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINAN--IGR 161
Query: 193 EVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEVEFL 360
+++ F L DL G +TW N + K+DR LV++ W + F
Sbjct: 162 KIRAFRSCLLDSDLYDLVYKGSSYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFG 221
Query: 361 PSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQR-HYRGTAQFTLCR 537
SDHS C V + A+ P+R+FN + +F ++ + W + G+A + + +
Sbjct: 222 EPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSK 281
Query: 538 KLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVF 717
KLK LK + +R+++S I RV A + Q+ +P+ + +L RK +
Sbjct: 282 KLKHLKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQI- 340
Query: 718 LCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAA 897
L KAE+ F+ QK+ ++L + D T +FH + N I + + G R +Q +
Sbjct: 341 LAKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKE 400
Query: 898 EF----VSYYKSLLGTKQHTEPI---DPTIVGNGPCLDTDQQAELTRPILDQEIKDALFN 1056
++++SLL + + D ++ + C DQ +L R D +I++A F+
Sbjct: 401 GIKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRC-SVDQINDLERSFSDLDIQEAFFS 459
Query: 1057 ISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAH 1236
+ K+ GPDGYSS FFK W +VG +VT AVQEFF SG LLKQ + T + LIPK N+
Sbjct: 460 LPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSS 519
Query: 1237 TVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRK 1416
+ D+RPISC N +YK+I K+L RL +LN +I +Q AF+ GR + EN+ L E++
Sbjct: 520 KMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHG 579
Query: 1417 YNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISING 1596
YN K S R +K+DLRKAFDSV W F+ L P F WI QC+++P FS+ +NG
Sbjct: 580 YNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNG 639
Query: 1597 GLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYA 1773
GFFK KGLRQGDPLSPYLFV+ +E S LLK + + + +HP L I+HL++A
Sbjct: 640 SSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFA 699
Query: 1774 DDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTR 1953
DD+M+ G +S+ + + L DF + SGLH+N K+N+Y+A DE + AI +
Sbjct: 700 DDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAI-SHYGFPI 758
Query: 1954 GTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECF 2133
T+P RYLG+PL + +LK+ YE L+ + S W+ +LS+AGR +L+ SV+ G+ F
Sbjct: 759 STLPIRYLGLPLMSRKLKISEYE-LVKRFRS----WAVKSLSFAGRVQLITSVITGLVNF 813
Query: 2134 WMSVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGLGLRDLKTWNQ 2298
WMS F + KI LC R+LW IAW +CLPKNEGG+ LR WN+
Sbjct: 814 WMSTFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVALRRFTPWNK 873
Query: 2299 ALLTKNLWNIHGQKDTLW 2352
+ +W + D LW
Sbjct: 874 TFYLRFIWPLFADNDVLW 891
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 486 bits (1251), Expect = e-134
Identities = 293/846 (34%), Positives = 452/846 (53%), Gaps = 32/846 (3%)
Frame = +1
Query: 61 ERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGA--PVSPYEVKDFEEVCSI 225
ER+ LW +L+D ++ I PWI+ GDFN +L EE N PV+ ++DF+ +
Sbjct: 3 ERKELWNDLRDHSDSPIIRSKPWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAVNH 62
Query: 226 LGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEVEFLPSGTSDHSPCI 393
+TDL G FTW+N + KLDR LV++ WL + RS F G SDH C
Sbjct: 63 CSITDLAYHGPLFTWSNKRENDLIAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLRCR 122
Query: 394 VSILDNGFSA----RTPWRYFNMLAEHENFHSIVSDGWQRH---YRGTAQ-FTLCRKLKG 549
++ L+ G A + P+++ N++ E E+F V W + T+ F +KLKG
Sbjct: 123 IN-LNVGAGAVVKGKRPFKFVNVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLKG 181
Query: 550 LKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVFLCKA 729
LK L+ L ++ ++ + K A L Q +P+ ++ + E +
Sbjct: 182 LKPLLRNLGKERLGNLVKQTKEAFETLCQKQAMKMANPSPSSMQEEN-EAYAKWDHIAVL 240
Query: 730 EKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAAEFVS 909
E+ F +Q++K ++L DR K FH V +N I I DG+ + ++ E
Sbjct: 241 EEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEH 300
Query: 910 YYKSLLGTKQH------TEPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISDEK 1071
+++ L + E + + C D+D++ LT + +EI +F++ ++K
Sbjct: 301 HFREFLQLIPNDFEGIAVEELQDLLPYR--CSDSDKEM-LTNHVSAEEIHKVVFSMPNDK 357
Query: 1072 SPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDY 1251
SPGPDGY++ F+K +W+I+G + A+Q FF G L K +++T++ALIPK A + DY
Sbjct: 358 SPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDY 417
Query: 1252 RPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKR 1431
RPISCCNV+YK+I+KI+A RL VL I G Q AF+K R ++EN+ L E+++ Y++
Sbjct: 418 RPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDS 477
Query: 1432 SSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGF 1611
S RC +KID+ KAFDSV W FL +LE + FPP F +WI C+T+ SFS+ +NG L G
Sbjct: 478 VSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGV 537
Query: 1612 FKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLML 1788
F + LRQG LSPYLFVI ++ LS++L K F +HP C A+ +THL +ADDLM+
Sbjct: 538 FSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMI 597
Query: 1789 LSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPF 1968
LS G S+ ++ L +F SGL +++ KS +Y+A V + I+ G +P
Sbjct: 598 LSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPV 657
Query: 1969 RYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVF 2148
RYLG+PL ++RL PL+ ++ I W+S LS+AGR L+ S L + FWM+ F
Sbjct: 658 RYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAF 717
Query: 2149 PIPAEVRTKIIQLCRRYLW-----DNGKVCIAWDTLCLPKNEGGLGLRDLKTWNQALLTK 2313
+P +I +LC +LW + K ++W+ +C PK E W+ K
Sbjct: 718 RLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPKKE---------AWH-----K 763
Query: 2314 NLWNIHGQKDTLWYRW--VHHTYLRAQTVWDWNVKNS-DSPLIKNILNTRDQLIAECGGS 2484
+W H + W + + Q + WN+++S L N L TRD L C +
Sbjct: 764 GVWFAHETPKHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSCAYT 823
Query: 2485 VQLAEA 2502
+ EA
Sbjct: 824 SGIWEA 829
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 481 bits (1239), Expect = e-133
Identities = 317/1020 (31%), Positives = 517/1020 (50%), Gaps = 25/1020 (2%)
Frame = +1
Query: 16 RQFFASFVYGLNDRAERRPLWQN---LKDTKEAVTIPWILMGDFNSVLFSEERR--NGAP 180
+ F +FVYG N +RR LW++ L T PW+L+GDFN + + E N +
Sbjct: 143 QSFAVAFVYGRNSELDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSL 202
Query: 181 VSPYEVKDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSE 348
++ ++D + L+DLPS G+FFTW+N + KLDRAL + W +
Sbjct: 203 LNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSAL 262
Query: 349 VEFLPSGTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYR-GTAQF 525
F P G SDH+PCI+ I + ++ ++YF+ L+ H ++ + +S W+ + G+ F
Sbjct: 263 AVFDPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEENTLVGSHMF 322
Query: 526 TLCRKLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRK 705
+L + LK K + LNR FS+I R + LED+Q + P++ + + + RK
Sbjct: 323 SLRQHLKVAKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHV-ARK 381
Query: 706 DVVFLCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQG 885
+F A + F++QK++ +L + D T+FFH V + N I + +DG R +
Sbjct: 382 QWIFFAAALESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVD 441
Query: 886 EVAAEFVSYYKSLLGTKQHTEPIDPTIVGNGPCL-----DTDQQAELTRPILDQEIKDAL 1050
++ ++YY LLG +E + P V L D+ ++LT ++EI L
Sbjct: 442 QIKGMLIAYYSHLLGIP--SENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVL 499
Query: 1051 FNISDEKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDN 1230
F++ K+PGPDG+ FF ++W+IV V A++EFF SG+L + + T I LIPK
Sbjct: 500 FSMPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTG 559
Query: 1231 AHTVNDYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELL 1410
A + +RP++CC IYK+IT+I++ RL ++ + Q FIKGR + EN+ L EL+
Sbjct: 560 ADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELV 619
Query: 1411 RKYNRKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISI 1590
+ + R +++D+ KA+D+V+W FL +L+ L P F +WI C++S S+SI+
Sbjct: 620 DNFEADGETTRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAF 679
Query: 1591 NGGLHGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQSH-FNFHPMCGALRITHLV 1767
NG L GFF+G+KG+RQGDP+S +LFV+ ++ LS+ L + FN HP C A ITHL
Sbjct: 680 NGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLS 739
Query: 1768 YADDLMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQL 1947
+ADD+++ S G +S+ ++ L DF SGL +N K+ + + + ++ + +
Sbjct: 740 FADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGI 799
Query: 1948 TRGTMPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVE 2127
T G++P RYLG+PL +++++ Y+PL+++I+S W++ LS+AGR LQ +
Sbjct: 800 THGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGR-------LQLLN 852
Query: 2128 CFWMSVFPIPAEVRTKIIQLCRRYLWDNGKVCIAWDTLCLPKNEGGLGLRDLKTWNQALL 2307
W + + R II C +G W D T + LL
Sbjct: 853 WIWRKLCKLRPFARPFII--CEV---GSGVTASFW--------------HDNWTDHGPLL 893
Query: 2308 TKNLWNIHGQKDTLWYRWVHHTYLRAQTVWD-WNVKNSDSPLIKNILNTRDQLIAECGGS 2484
++ G L ++ +R D W + +S S +N + T Q + S
Sbjct: 894 -----HLTGPAGPLLAGLPLNSVVRDALRDDTWRISSSRS---RNPVITLLQRVLPSAAS 945
Query: 2485 VQLAEAKLTY-WRDGLPGTGSR----DAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWL 2649
+ TY W+ G +R D + + +P T V W VW + PK +FI W+
Sbjct: 946 LIDCPHDDTYLWKIGHHAPSNRFSTADTWSYLQPSSTSVLWHKAVWFKDHVPKQAFICWV 1005
Query: 2650 CTHGRVLTKDRL---GFMELDVNCVYCSQHRETAAHLFFECPFSKQVWTEIRSWMGITRQ 2820
H R+ T+DRL GF + CV C+ E+ HLFF C FS ++W+ + +
Sbjct: 1006 VAHNRLHTRDRLRRWGF-SIPPTCVLCNDLDESREHLFFRCQFSSEIWSFFMRALNLNPP 1064
Query: 2821 MSTLRSALKWMKKEAKGSGWRAKGQKAGLASTVYHIWNARNRLIFEKETPVVDKIVKQIK 3000
+ L W ++ K ++VY IW RN I I+K+I+
Sbjct: 1065 PQFMH-CLLWTLTASRDRNITLI-TKLLFHASVYFIWRERNLRIHSNSVRPAHLIIKEIQ 1122
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 479 bits (1233), Expect = e-132
Identities = 289/854 (33%), Positives = 439/854 (51%), Gaps = 19/854 (2%)
Frame = +1
Query: 19 QFFASFVYGLNDRAERRPLWQNLKDTKEAVTI---PWILMGDFNSVLFSEERRNGAPVSP 189
+FF SF+Y N ERR LW++++ ++ I PWIL GDFN +L E N SP
Sbjct: 462 EFFCSFIYASNFVEERRILWEDIRSHHDSPLIRNKPWILCGDFNEILEGGEHSN-YDNSP 520
Query: 190 YEVKDFEEVCSILGLTDLPSTGLFFTWTNLTVWSKLDRALVDNAWLLADFRSEVEFLPSG 369
Y G+ D G R +E +G
Sbjct: 521 YTPP---------GMRDFQEIG----------------------------RLMLEAAATG 543
Query: 370 TSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQR----HYRGTAQFTLCR 537
R P+++ N+L + F +V W + +A + +
Sbjct: 544 -----------------GRKPFKFVNVLTKLPQFLPVVESHWASSAPLYVSTSALYRFSK 586
Query: 538 KLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVF 717
KLK LK L+EL ++ + R + A L + Q +P+ I +L + D
Sbjct: 587 KLKTLKPHLRELGKEKLGDLPKRTREAHILLCEKQATTLANPSQETIAEEL-KAYTDWTH 645
Query: 718 LCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAA 897
L + E+ F +QK+K +++ D +FH + RN I I + + E+
Sbjct: 646 LSELEEGFLKQKSKLHWMNVGDGNNSYFHKAAQVRKMRNSIREIRGPNAETLQTSEEIKG 705
Query: 898 EFVSYYKSLLGTKQ---HTEPI-DPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISD 1065
E ++ L + H + D + + C TDQ LTR + +EI+ LF + +
Sbjct: 706 EAERFFNEFLNRQSGDFHGISVEDLRNLMSYRCSVTDQNI-LTREVTGEEIQKVLFAMPN 764
Query: 1066 EKSPGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVN 1245
KSPGPDGY+S FFK +WS+ G A+Q FF G L K L+ T++ALIPK D A +
Sbjct: 765 NKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMK 824
Query: 1246 DYRPISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNR 1425
DYRPISCCNV+YK+I+KILA RL +L I Q AF+K R ++EN+ L EL++ Y++
Sbjct: 825 DYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHK 884
Query: 1426 KRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLH 1605
+ +PRC +KID+ KAFDSV W FL LE L FP TF +WI C+++ +FS+ +NG L
Sbjct: 885 ESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELA 944
Query: 1606 GFFKGEKGLRQGDPLSPYLFVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDL 1782
GFF +GLRQG LSPYLFVIC+ LS ++ + + +HP C + +THL +ADDL
Sbjct: 945 GFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDL 1004
Query: 1783 MLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTM 1962
M+ G S++ +++ +F +SGL +++ KS IY+A V D L+S G +
Sbjct: 1005 MVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQL 1064
Query: 1963 PFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMS 2142
P RYLG+PL +++ Y PL+ + + I+ W++ +LSYAGR L+ SV+ + FWMS
Sbjct: 1065 PVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMS 1124
Query: 2143 VFPIPAEVRTKIIQLCRRYLWDN-----GKVCIAWDTLCLPKNEGGLGLRDLKTWNQALL 2307
+ +PA +I +LC +LW K IAW ++C PK EGGLG++ L N+
Sbjct: 1125 AYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSC 1184
Query: 2308 TKNLWNIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNS-DSPLIKNILNTRDQLIAECGGS 2484
K +W + + +LW W+ +R T W N ++S S + K +L R+ +A+
Sbjct: 1185 LKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLKYRE--LAKSMHK 1242
Query: 2485 VQLAEAKLT-YWRD 2523
V++ T +W D
Sbjct: 1243 VEVRNGSSTSFWYD 1256
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 470 bits (1209), Expect = e-129
Identities = 275/797 (34%), Positives = 433/797 (54%), Gaps = 22/797 (2%)
Frame = +1
Query: 31 SFVYGLNDRAERRPLWQNLKDTKEAVT---IPWILMGDFNSVLFSEERRNGAPVSPYE-V 198
S VY N+ R+ LW+ L +++ PWI++GDFN VL E ++ +
Sbjct: 56 SIVYAANEAITRKELWEELLLLSVSLSGNGKPWIMLGDFNQVLCPAEHSQATSLNVNRRM 115
Query: 199 KDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEVEFLPS 366
K F + L DL G FTW N + V KLDR LV+ +W + F
Sbjct: 116 KVFRDCLFEAELCDLVFKGNTFTWWNKSATRPVAKKLDRILVNESWCSRFPSAYAVFGEP 175
Query: 367 GTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQR-HYRGTAQFTLCRKL 543
SDH+ C V I + P+R++N L ++ +F S+V + W + G++ F + +KL
Sbjct: 176 DFSDHASCGVIINPLMHREKRPFRFYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKKL 235
Query: 544 KGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVFLC 723
K LK ++ + ++FS++ RVK A N + Q + P + + +E ++ + L
Sbjct: 236 KALKNPIRTFSMENFSNLEKRVKEAHNLVLYRQNKTLSDPT-IPNAALEMEAQRKWLILV 294
Query: 724 KAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAAEF 903
KAE+ F+ Q+++ ++ + D T +FH + N I I ++G + +Q +
Sbjct: 295 KAEESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDDNGVKIDTQLGIKEHC 354
Query: 904 VSYYKSLLGTKQHTEPI---DPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISDEKS 1074
+ Y+ +LLG + + D ++ C DQ+ EL Q+IK A F+ K+
Sbjct: 355 IEYFSNLLGGEVGPPMLIQEDFDLLLPFRC-SHDQKKELAMSFSRQDIKSAFFSFPSNKT 413
Query: 1075 PGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDYR 1254
GPDG+ FFK++WS++G +VT+AV EFFTS LLKQ + T + LIPK NA +ND+R
Sbjct: 414 SGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKITNASKMNDFR 473
Query: 1255 PISCCN----VIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYN 1422
PISC + +YK+I ++L RL +L+ +I Q AF+ GR + EN+ L EL++ YN
Sbjct: 474 PISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYN 533
Query: 1423 RKRSSPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGL 1602
R+ PR +K+DLRKAFDS+ W F+ L+ +G P F WI QC+++P+FS+ +NG
Sbjct: 534 RQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNT 593
Query: 1603 HGFFKGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYADD 1779
GFFK +GLRQG+PLSP+LFV+ +E S LL ++ Q+ + ++HP L I+HL++ADD
Sbjct: 594 GGFFKSTRGLRQGNPLSPFLFVLAMEVFSSLLNSRFQAGYIHYHPKTSPLSISHLMFADD 653
Query: 1780 LMLLSRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGT 1959
+M+ G +S+ + + L DF SGL +N K+++Y+A +D + I
Sbjct: 654 IMVFFDGGSSSLHGISEALEDFAFWSGLVLNREKTHLYLAGLDRIEASTI---------- 703
Query: 1960 MPFRYLGIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWM 2139
A +L++ Y PLL K++ WS LS+AGR +L+ SV+ G+ FW+
Sbjct: 704 -----------ARKLRIAEYGPLLEKLAKRFRSWSVKCLSFAGRVQLIASVISGIINFWI 752
Query: 2140 SVFPIPAEVRTKIIQLCRRYLWDNG-----KVCIAWDTLCLPKNEGGLGLRDLKTWNQAL 2304
S F +P +I LC R+LW +AW +CLPK EGG+GLR +
Sbjct: 753 STFILPKGCVKRIEALCARFLWSGNIDVKKGAKVAWSEVCLPKEEGGVGLRRF-----TV 807
Query: 2305 LTKNLWNIHGQKDTLWY 2355
L LW+ G+K + W+
Sbjct: 808 LNTTLWD--GKKISFWF 822
Score = 64.3 bits (155), Expect = 3e-07
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 2533 GTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTKDRLGF--MELDV 2706
G + ++ RPK + WT VW + PKH+F +W+ R+ T+ RL +
Sbjct: 903 GFSAARTWEAMRPKKPVKDWTKSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTT 962
Query: 2707 NCVYCSQHRETAAHLFFECPFSKQVWTEIRSWMGITRQMSTLRS---ALKWMKKEAKGSG 2877
+C CS E+ HL C FS +W + + +T + S L W + S
Sbjct: 963 DCCLCSSRPESRDHLLLYCVFSAVIWKLV--FFRLTPSQAIFNSWAELLSWTR--INSSK 1018
Query: 2878 WRAKGQKAGLASTVYHIWNARNRLI 2952
+ +K ++V+H+W RN ++
Sbjct: 1019 APSLLRKIAAQASVFHLWKQRNNVL 1043
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 445 bits (1145), Expect = e-122
Identities = 284/841 (33%), Positives = 419/841 (49%), Gaps = 102/841 (12%)
Frame = +1
Query: 793 KFFHALVKRNAKRNFIASISREDGTRTCSQGEVAAEFVSYYKSLLGTKQHTEPIDPTIVG 972
K FH V +N I I DG R ++ E ++K L + I VG
Sbjct: 22 KTFHRAVIERETKNMIKEIYCTDG-RVVQGDDIMVEAEKFFKEFL------QLIPEDFVG 74
Query: 973 ----------NGPCLDTDQQAELTRPILDQEIKDALFNISDEKSPGPDGYSSNFFKKSWS 1122
C ++D + LTR + +EIK LF++ +KSPGPDGY+S F+K +W
Sbjct: 75 VEVRELQDLLQFRCTNSDNEM-LTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWD 133
Query: 1123 IVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDYRPISCCNVIYKIITKIL 1302
I+G++ T VQ FF G L K +++ ++ALIPK A + DYRPISCCNV+YK+I+KI+
Sbjct: 134 IIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKII 193
Query: 1303 AGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPRCTIKIDLRKAFDS 1482
A RL +L I Q AF+K R ++EN+ L EL++ Y++ S RC IKID+ KAFDS
Sbjct: 194 ANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDS 253
Query: 1483 VSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGEKGLRQGDPLSPYL 1662
V WSFL L + F PTF +WI C+T+ SFS+ +NG L G+F+ ++GLRQG LSPYL
Sbjct: 254 VQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYL 313
Query: 1663 FVICIEYLSRLL-KTKTQSHFNFHPMCGALRITHLVYADDLMLLSRGDPTSVQILMDCLA 1839
FVIC++ LS++L K F FHP C L +THL +ADDLM+LS G S++ +++
Sbjct: 314 FVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFD 373
Query: 1840 DFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFRYLGIPLAAERLKVIYY 2019
+F +SGL +++ KS +YMA V + I G +P RYLG+PL +RL Y
Sbjct: 374 EFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADY 433
Query: 2020 EPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIPAEVRTKIIQLCRRY 2199
PLL +I I W+ S+AGR L++SVL + FW++ F +P + +I +LC +
Sbjct: 434 SPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSF 493
Query: 2200 LWDNG-----KVCIAWDTLCLPKNEGGLGLRDLKTWNQA--------------------- 2301
LW K I+WD +C PK EGGLGLR+LK N
Sbjct: 494 LWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWV 553
Query: 2302 ----LLTKNLWNI------------------------------HGQKDTLWY-RWVHHTY 2376
+ K++W++ +G+ + WY W H
Sbjct: 554 AEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGR 613
Query: 2377 L---------------RAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGGSVQLAEAKLT 2511
L R +V D + S ++LN ++++A + ++A+ T
Sbjct: 614 LIDTVGDKGTIDLGIPREASVADAWTRRSRRRHRTSLLNEIEEMMAY--QRIHHSDAEDT 671
Query: 2512 Y-WRDG----LPGTGSRDAYQFFRPKGTIVPWTNVVWGRSIPPKHSFILWLCTHGRVLTK 2676
WR P +RD + + + V W VW R PK++ WL H R+ T
Sbjct: 672 VLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTG 731
Query: 2677 DRL----GFMELDVNCVYCSQHRETAAHLFFECPFSKQVWTEIRSWMGITRQMSTLRSAL 2844
DR+ + NCV C+ + +T HLFF C ++ VW + + TR + L
Sbjct: 732 DRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYSTRWSHLL 791
Query: 2845 KWMKKEAKGSGWRAKG--QKAGLASTVYHIWNARN--RLIFEKETP--VVDKIVKQIKTQ 3006
+ + R +G + +T+YH+W RN R TP V+ I KQ + Q
Sbjct: 792 THISTHFQD---RVEGFLTRYIFQATIYHVWRERNGRRHDAAPNTPATVIGWIDKQTRNQ 848
Query: 3007 V 3009
+
Sbjct: 849 I 849
>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
Length = 2215
Score = 442 bits (1137), Expect = e-121
Identities = 272/847 (32%), Positives = 436/847 (51%), Gaps = 14/847 (1%)
Frame = +1
Query: 25 FASFVYGLNDRAERRPLWQNLKDTKEAVTIPWILMGDFNSVLFSEERRNGAPVSPYEVKD 204
F +FVY R+ER PLW L++ + PWI+ GDFN +L EER GA ++D
Sbjct: 947 FTTFVYAKCTRSERTPLWNCLRNLAADMEGPWIVGGDFNIILKREERLYGADPHEGSIED 1006
Query: 205 FEEVCSILGLTDLPSTGLFFTWTNLTVWSKLDRALVDNAWLLADFRSEVEFLPSGTSDHS 384
F V GL D G FTWTN ++ +LDR + + W+ + ++ L SDH
Sbjct: 1007 FASVLLDCGLLDGGFEGNPFTWTNNRMFQRLDRMVYNQQWINKFPITRIQHLNRDGSDHC 1066
Query: 385 PCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYRGTAQFTLCRKLKGLKADL 564
P ++S ++ A + +R+ + A H NF++ V W G+ K K LK L
Sbjct: 1067 PLLLSCSNSSEKAPSSFRFLHAWALHHNFNASVEGNWNLPINGSGLMAFWSKQKRLKQHL 1126
Query: 565 KELNRQHFSHISSRVKNAKNELED---LQQQFHEHPNNLDIKSKLLEVRKDVVFLCKAEK 735
K N+ F I S +K A+ +E+ L QQ + + + ++ K + E+
Sbjct: 1127 KWWNKTVFGDIFSNIKEAEKRVEECEILHQQEQTIGSRIQLNKSYAQLNKQL----SMEE 1182
Query: 736 MFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAAEFVSYY 915
+F++QK+ ++++ +R TKFFH +++ R+ I I +DG ++ + ++
Sbjct: 1183 IFWKQKSGVKWVVEGERNTKFFHMRMQKKRIRSHIFKIQEQDGNWIEDPEQLQQSAIDFF 1242
Query: 916 KSLLGTKQHTEPIDPTIVGNGPC----LDTDQQAELTRPILDQEIKDALFNISDEKSPGP 1083
SLL E D T + C DTD P L QE+K+A+F I E + GP
Sbjct: 1243 SSLL----KAESCDDTRFQSSLCPSIISDTDNGFLCAEPTL-QEVKEAVFGIDPESAAGP 1297
Query: 1084 DGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDYRPIS 1263
DG+SS+F+++ W I+ + AV+EFF + + +++T + LIPK+ +A +++RPIS
Sbjct: 1298 DGFSSHFYQQCWDIIAHDLFEAVKEFFHGADIPQGMTSTTLVLIPKTTSASKWSEFRPIS 1357
Query: 1264 CCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSSPR 1443
C V+ KIITKILA RLA +L II Q F+ GR I +NI L QEL+ K ++K
Sbjct: 1358 LCTVMNKIITKILANRLAKILPSIITENQSGFVGGRLISDNILLAQELIGKLDQKNRGGN 1417
Query: 1444 CTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFFKGE 1623
+K+D+ KA+D + WSFL ++L+ LGF + I +C+++ FS+ +NG G+FK E
Sbjct: 1418 VALKLDMMKAYDRLDWSFLFKVLQHLGFNAQWIGMIQKCISNCWFSLLLNGRTVGYFKSE 1477
Query: 1624 KGLRQGDPLSPYLFVICIEYLSRLLKTKTQSHFNFHPMCG-ALRITHLVYADDLMLLSRG 1800
+GLRQGD +SP LF++ EYL+R L + + H G +L ++HL +ADD+++ + G
Sbjct: 1478 RGLRQGDSISPQLFILAAEYLARGLNALYDQYPSLHYSSGCSLSVSHLAFADDVIIFANG 1537
Query: 1801 DPTSVQILMDCLADFGAKSGLHMNILKSNIYM-AAVDEGDTEAILTSTQLTRGTMPFRYL 1977
+++Q +M L ++ SG +N KS + + + IL +T + +P YL
Sbjct: 1538 SKSALQKIMAFLQEYEKLSGQRINPQKSCVVTHTNMASSRRQIILQATGFSHRPLPITYL 1597
Query: 1978 GIPLAAERLKVIYYEPLLNKISSYINGWSSSTLSYAGRTELVRSVLQGVECFWMSVFPIP 2157
G PL KV+ + L+ KI I GW + TLS GR L+RS L + + + V P
Sbjct: 1598 GAPLYKGHKKVMLFNDLVAKIEERITGWENKTLSPGGRITLLRSTLSSLPIYLLQVLKPP 1657
Query: 2158 AEVRTKIIQLCRRYLWDNGKVC-----IAWDTLCLPKNEGGLGLRDLKTWNQALLTKNLW 2322
V +I +L +LW +W + LP EGGL +R+++ +A K W
Sbjct: 1658 VIVLERINRLLNNFLWGGSTASKRIHWASWGKIALPIAEGGLDIRNVEDVCEAFSMKLWW 1717
Query: 2323 NIHGQKDTLWYRWVHHTYLRAQTVWDWNVKNSDSPLIKNILNTRDQLIAECGGSVQLAEA 2502
++LW +++ Y Q D K DS K ++ I E ++
Sbjct: 1718 RFR-TTNSLWTQFMRAKYCGGQLPTDVQPKLHDSQTWKRMVTISS--ITEQNIRWRIGHG 1774
Query: 2503 KLTYWRD 2523
+L +W D
Sbjct: 1775 ELFFWHD 1781
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 416 bits (1069), Expect(2) = e-120
Identities = 246/682 (36%), Positives = 380/682 (55%), Gaps = 13/682 (1%)
Frame = +1
Query: 31 SFVYGLNDRAERRPLWQNLKD-TKEAVTI--PWILMGDFNSVLFSEERRNGAPVS-PYEV 198
S VY N+ +R+ LW+ + VT PWIL+GDFN VL E ++ +
Sbjct: 99 SVVYAANEDDKRKELWREITALVASPVTFNRPWILLGDFNQVLHPHEHSRHVSLNVDRRI 158
Query: 199 KDFEEVCSILGLTDLPSTGLFFTWTNLT----VWSKLDRALVDNAWLLADFRSEVEFLPS 366
+DF E L+DL G FTW N + V K+DR LV+ +W S F P
Sbjct: 159 RDFRECLLDAELSDLVYKGSSFTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPP 218
Query: 367 GTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGW-QRHYRGTAQFTLCRKL 543
SDH+ C V + + A+ P+++FN L ++ F ++V D W + G++ F + +KL
Sbjct: 219 DFSDHASCGVVLELDPIKAKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKL 278
Query: 544 KGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVFLC 723
K LK +K+ +R ++S++ R + A L Q ++P+ L+ + LE ++ L
Sbjct: 279 KALKKPIKDFSRLNYSNLEKRTEEAHETLLSFQNLTLDNPS-LENAAHELEAQRKWQILA 337
Query: 724 KAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAAEF 903
AE+ F++Q+++ + + D T++FH + N I ++ + GT+ SQ +A
Sbjct: 338 TAEESFFRQRSRVTWFAEGDGNTRYFHRMADSRKSVNTITTLVDDSGTQIDSQQGIADHC 397
Query: 904 VSYYKSLLGTKQHT---EPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISDEKS 1074
Y+++LL E D ++ C Q A+L D++IK A F + K+
Sbjct: 398 ALYFENLLSDDNDPYSLEQDDMNLLLTYRC-PYSQVADLEAMFSDEDIKAAFFGLPSNKA 456
Query: 1075 PGPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDYR 1254
GPDG+ VT AV+EFF SG+LLKQ + T I LIPK NA +D+R
Sbjct: 457 CGPDGFP--------------VTAAVREFFISGNLLKQWNATTIVLIPKFPNASCTSDFR 502
Query: 1255 PISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRS 1434
PISC N +YK+I ++L RL +L+ +I +Q AF+ GR + EN+ L E++ YN +
Sbjct: 503 PISCMNTLYKVIARLLTDRLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNI 562
Query: 1435 SPRCTIKIDLRKAFDSVSWSFLQEMLEGLGFPPTFNNWILQCVTSPSFSISINGGLHGFF 1614
S R +K+DLRKAFDSV W F+ L LG P F NWI QC+++P+F++S+NG GFF
Sbjct: 563 SLRGMLKVDLRKAFDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFF 622
Query: 1615 KGEKGLRQGDPLSPYLFVICIEYLSRLLKTKTQS-HFNFHPMCGALRITHLVYADDLMLL 1791
K KGLRQGDPLSPYLFV+ +E S+LL ++ S + +HP L I+HL++ADD+M+
Sbjct: 623 KSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIF 682
Query: 1792 SRGDPTSVQILMDCLADFGAKSGLHMNILKSNIYMAAVDEGDTEAILTSTQLTRGTMPFR 1971
G +S+ + + L DF + SGL +N KS+ + A +++ + + L + +G +P R
Sbjct: 683 FDGGSSSLHGICETLEDFASWSGLKVNNDKSHFFCAGLEQAERNS-LAAYGFPQGCLPIR 741
Query: 1972 YLGIPLAAERLKVIYYEPLLNK 2037
YLG+PL +L++ YEPLL K
Sbjct: 742 YLGLPLMCRKLRIAEYEPLLEK 763
Score = 46.2 bits (108), Expect(2) = e-120
Identities = 44/133 (33%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Frame = +2
Query: 2036 KSPRT*MVGVVPPYLMPGELNLCAPYSKGWSVFGCPSSLFQQKFGLRLYSYAVAIFGTME 2215
KSP+ G YL E NL P S S FGCP S Q+ RL ++ + G+ E
Sbjct: 763 KSPKNSDHGQQIVYLTQVEFNLLLPLSMVSSTFGCPLSCCQRVALRRLKAF---VLGSFE 819
Query: 2216 RFVLH--------GTLFAFPKTKEALVFETLKLGTRPSSLRIFGTYMGRRTRCGTDGCTI 2371
R L G LFA K K L E GT+ +FG + + R G G I
Sbjct: 820 RETLMVVEEQRSLGLLFASQKMKVGLALEDSPSGTKRFVCVLFGFSLIIKVRFGFLGTLI 879
Query: 2372 LIFGHRPFGTGML 2410
I P+ ML
Sbjct: 880 TILEADPWSWRML 892
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 437 bits (1123), Expect = e-119
Identities = 221/497 (44%), Positives = 320/497 (64%), Gaps = 1/497 (0%)
Frame = +1
Query: 1 CKITGRQFFASFVYGLNDRAERRPLWQNLKDTKEAVTIPWILMGDFNSVLFSEERRNGAP 180
CK T ++F SF+YGL+ RR LW NL + PW+L+GDFNS+L +R NGA
Sbjct: 468 CKTTAKRFQVSFIYGLHSIMARRSLWINLNSINANMNCPWLLIGDFNSILSPTDRFNGAE 527
Query: 181 VSPYEVKDFEEVCSILGLTDLPSTGLFFTWTNLTVWSKLDRALVDNAWLLADFRSEVEFL 360
++ YE++DF + S LGL + + G +TWTN VWSKLDRAL + AW + S E +
Sbjct: 528 LNAYELQDFVDCYSDLGLGSINTHGPLYTWTNSRVWSKLDRALCNQAWFNSFGNSACEVM 587
Query: 361 PS-GTSDHSPCIVSILDNGFSARTPWRYFNMLAEHENFHSIVSDGWQRHYRGTAQFTLCR 537
SDH+P +V+ +P+++ N++ +H NF IV+DGW+++ G + F +C+
Sbjct: 588 EFISISDHTPLVVTTELVVPRGNSPFKFNNLIVDHPNFLRIVADGWKQNIHGCSMFKVCK 647
Query: 538 KLKGLKADLKELNRQHFSHISSRVKNAKNELEDLQQQFHEHPNNLDIKSKLLEVRKDVVF 717
KLK LKA LK L +Q FS+IS+RV+ A+ E + ++P + + + R +
Sbjct: 648 KLKALKAPLKNLFKQEFSNISNRVELAEAEYNSVLNSIKQNPQDPSLLALANRTRGQTIM 707
Query: 718 LCKAEKMFYQQKAKCNYLMQSDRCTKFFHALVKRNAKRNFIASISREDGTRTCSQGEVAA 897
L KAE M + Q K YL+Q+D+C+KFFHAL+KRN FIA+I EDG T SQ E+A
Sbjct: 708 LRKAESMKFAQLIKNKYLLQADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDEIAL 767
Query: 898 EFVSYYKSLLGTKQHTEPIDPTIVGNGPCLDTDQQAELTRPILDQEIKDALFNISDEKSP 1077
FV+++++ + T+ +I GP + TD A L P Q++ + + +++ K+P
Sbjct: 768 AFVNHFRNFFSAHELTQTPSISICNRGPKVPTDCFAALLCPTSKQKVWNIISVMANNKAP 827
Query: 1078 GPDGYSSNFFKKSWSIVGEQVTNAVQEFFTSGSLLKQLSNTVIALIPKSDNAHTVNDYRP 1257
GPDG++ FFKK+W+IVG+ + AV EFFT+G +LKQL++ +I LIPK D A VN +RP
Sbjct: 828 GPDGFNVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHFRP 887
Query: 1258 ISCCNVIYKIITKILAGRLASVLNPIIDGAQGAFIKGRNIVENIHLMQELLRKYNRKRSS 1437
ISCCN++YKI++KILA R+A VL II Q AFIK R +++NI L+QE+LRKY RKR S
Sbjct: 888 ISCCNLLYKIVSKILANRIAPVLETIIGETQTAFIKNRKMMDNIFLVQEILRKYARKRPS 947
Query: 1438 PRCTIKIDLRKAFDSVS 1488
PRC +KIDL KA+D +S
Sbjct: 948 PRCLLKIDLHKAYDFIS 964