BLASTX nr result

ID: Rehmannia24_contig00008234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00008234
         (369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620005.1| GRF zinc finger containing protein [Medicago...    61   1e-07
ref|XP_003599949.1| GRF zinc finger containing protein [Medicago...    61   1e-07
ref|XP_003630244.1| hypothetical protein MTR_8g093410 [Medicago ...    60   4e-07
ref|XP_002530000.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
gb|EMJ05680.1| hypothetical protein PRUPE_ppa021209mg, partial [...    57   2e-06
ref|XP_003612076.1| GRF zinc finger containing protein [Medicago...    57   3e-06
ref|XP_003593148.1| GRF zinc finger containing protein [Medicago...    56   4e-06

>ref|XP_003620005.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355495020|gb|AES76223.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 115

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +2

Query: 155 SCGGEVPMRCYCGFQLRVQTSKTKANPGRRFISCPQR-GNNKCGFFYWCDPELSDHSQQV 331
           SC G+  + CYCG    + T+ T  NPGRRF  C +     KC FF W DPE+    +++
Sbjct: 15  SCLGKTKLVCYCGVDSPLVTAWTDENPGRRFHGCGKYWQRRKCSFFRWFDPEVPQRQKKI 74

Query: 332 INGLVDNLNAVK 367
           I GL+   +A+K
Sbjct: 75  IRGLLKKNDALK 86


>ref|XP_003599949.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355488997|gb|AES70200.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 114

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +2

Query: 164 GEVPMRCYCGFQLRVQTSKTKANPGRRFISCPQRGNN-KCGFFYWCDPELSDHSQQVING 340
           G+  + CYCG +  + T+ T  NPGRRF  C +     KC FF W DPE+ D  ++VI G
Sbjct: 17  GKTKLVCYCGVESPLVTAWTDENPGRRFHGCGKYWQRRKCSFFRWFDPEVPDRQKKVIRG 76

Query: 341 LVDNLNAVK 367
           L+   +A+K
Sbjct: 77  LLKKNDALK 85


>ref|XP_003630244.1| hypothetical protein MTR_8g093410 [Medicago truncatula]
           gi|355524266|gb|AET04720.1| hypothetical protein
           MTR_8g093410 [Medicago truncatula]
          Length = 109

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +2

Query: 134 VGAHRCMSCGGEVPMRCYCGFQLRVQTSKTKANPGRRFISCPQRGNN-KCGFFYWCDPEL 310
           +G     +  G   + CYCG +  + T+ T  NPGRRF  C +     KC FF W DPE+
Sbjct: 2   LGKSSSSTVSGSSFLVCYCGVESPLVTAWTDENPGRRFHGCGKYWQRRKCSFFRWFDPEV 61

Query: 311 SDHSQQVINGLVDNLNAVK 367
            D  ++VI GL+   +A+K
Sbjct: 62  PDRQKKVIKGLLKKNDALK 80


>ref|XP_002530000.1| conserved hypothetical protein [Ricinus communis]
           gi|223530479|gb|EEF32362.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 35/59 (59%)
 Frame = +2

Query: 167 EVPMRCYCGFQLRVQTSKTKANPGRRFISCPQRGNNKCGFFYWCDPELSDHSQQVINGL 343
           EVP+ C CG+   V+ S +  NPG RF +CP +   KCG F W + E SD+    INGL
Sbjct: 6   EVPI-CGCGYGAFVEISNSNRNPGGRFYTCPFKDEQKCGLFSWYNREYSDYQLMYINGL 63


>gb|EMJ05680.1| hypothetical protein PRUPE_ppa021209mg, partial [Prunus persica]
          Length = 124

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = +2

Query: 182 CYCGFQLRVQTSKTKANPGRRFISCPQRGNNK-CGFFYWCDPELSDHSQQVINGLVDNL 355
           C+CG Q R+ TS T  NPGRRF  C   G  + C FF W DP++ + S+ VI GL+  L
Sbjct: 3   CHCGNQCRLTTSWTDNNPGRRFWGCANYGVRRGCAFFEWYDPQVCERSKIVICGLLKRL 61


>ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355513411|gb|AES95034.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 182 CYCGFQLRVQTSKTKANPGRRFISCPQR-GNNKCGFFYWCDPELSDHSQQVINGLVDNLN 358
           CYCG +  + T+ T  NPGRRF  C +     KC FF W DPE+ +  +++I GL+   +
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFHGCGKYFQRRKCSFFRWFDPEVPERQKKLIRGLLKKND 82

Query: 359 AVK 367
           A+K
Sbjct: 83  AMK 85


>ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482196|gb|AES63399.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +2

Query: 182 CYCGFQLRVQTSKTKANPGRRFISCPQR-GNNKCGFFYWCDPELSDHSQQVINGLVDNLN 358
           CYCG +  + T+ T  NPGRRF  C +     KC FF W DPE+ +  +++I GL+   +
Sbjct: 23  CYCGVESPLVTAWTDENPGRRFHGCGKYFQRRKCSFFRWFDPEVPERRKKLIRGLLKKND 82

Query: 359 AVK 367
           A+K
Sbjct: 83  AMK 85


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