BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00008154
         (607 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]       180   2e-43
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi...   169   7e-40
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi...   165   1e-38
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi...   152   9e-35
ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   151   1e-34
ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citr...   147   2e-33
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p...   144   2e-32
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi...   135   1e-29
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe...   133   3e-29
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   132   6e-29
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   132   6e-29
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ...   130   2e-28
ref|XP_002306437.1| pentatricopeptide repeat-containing family p...   130   4e-28
ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containi...   126   4e-27
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ...   122   1e-25
ref|NP_973481.1| pentatricopeptide repeat-containing protein [Ar...   120   3e-25
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar...   120   3e-25
gb|AAM62704.1| unknown [Arabidopsis thaliana]                         119   5e-25
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr...   119   8e-25

>gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]
          Length = 469

 Score =  180 bits (457), Expect = 2e-43
 Identities = 99/195 (50%), Positives = 121/195 (62%), Gaps = 2/195 (1%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKK--NPIKSDDSK 200
           MGK+PP FR  A+     +LLKP  S    + +P  +    TQK  SK+   P K  DS 
Sbjct: 1   MGKVPPIFRMTAT-----SLLKPKVSGVRTKDVPD-LPALLTQKVDSKRVRRPQKKSDST 54

Query: 201 TKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLN 380
            K +V SI FES NL++AKSLFNSL+S     P D NF N                  LN
Sbjct: 55  PKIDVSSIAFESSNLADAKSLFNSLVSGGAGIPRDPNFCNSILQSFSSVATPQDSIMFLN 114

Query: 381 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 560
           HM+KKHP+F PNR TY+ LL QSCSS DE+S+S VH ILNLM ++GFPPNQ S  +AVR+
Sbjct: 115 HMLKKHPSFSPNRLTYNILLKQSCSSADEQSVSGVHGILNLMKDSGFPPNQSSASIAVRA 174

Query: 561 LCGCGREEHAIELIK 605
           LC  GREEHA+EL+K
Sbjct: 175 LCESGREEHAVELVK 189


>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Solanum lycopersicum]
          Length = 469

 Score =  169 bits (427), Expect = 7e-40
 Identities = 97/200 (48%), Positives = 124/200 (62%), Gaps = 7/200 (3%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKP-----SKKNPIKSD 191
           MGK+PP+ R A     ++TL+K  +        PSP  + P   KP       ++P K  
Sbjct: 1   MGKLPPSLRSA--NFAVNTLIKTPS--------PSPSPSPPPTSKPHYYPKKSQSPKKKP 50

Query: 192 DSKTKSNVPS--ITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXX 365
            S T+  +PS  + F+S +LS+AK+LFNSLISST+N  +D+ FYN               
Sbjct: 51  TSITEPQLPSSILAFDSTSLSDAKTLFNSLISSTRNPSTDNKFYNAVLQSFSSNSTLQDS 110

Query: 366 XXXLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 545
              LNHM+K HP F P+RFTYH LLVQSC S D  SLS VH++LNLMT NGFPPN+VSTD
Sbjct: 111 IFFLNHMIKVHPPFSPDRFTYHVLLVQSCKSVDL-SLSPVHQVLNLMTTNGFPPNKVSTD 169

Query: 546 VAVRSLCGCGREEHAIELIK 605
           +AVR+LC  G EE AIEL+K
Sbjct: 170 IAVRTLCSSGHEEQAIELVK 189


>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Solanum tuberosum]
          Length = 467

 Score =  165 bits (417), Expect = 1e-38
 Identities = 94/200 (47%), Positives = 122/200 (61%), Gaps = 7/200 (3%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKP-----SKKNPIKSD 191
           MGK+PP+ R A     ++TL+K           PSP  + P   KP       + P K  
Sbjct: 1   MGKLPPSLRSA--NFAVNTLIKT----------PSPSPSPPPTSKPHYYPKKSQTPKKKL 48

Query: 192 DSKTKSNVPS--ITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXX 365
            S T+  +PS  + F+S +LS+AK+LFNSLIS+++N  SD+ FYN               
Sbjct: 49  TSNTEPQLPSSIVAFDSTSLSDAKTLFNSLISNSRNPTSDNKFYNAVLQSFSSNSTLQDS 108

Query: 366 XXXLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 545
              LNH++K HP F P+RFTYH LL+QSC S D  SLS VH++LNLMT NGFPPN+VSTD
Sbjct: 109 IFFLNHVIKVHPPFSPDRFTYHVLLIQSCKSVDL-SLSPVHQVLNLMTTNGFPPNKVSTD 167

Query: 546 VAVRSLCGCGREEHAIELIK 605
           +AVR+LC  G EE AIEL+K
Sbjct: 168 IAVRTLCSSGHEEQAIELVK 187


>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform X1 [Citrus sinensis]
           gi|568825365|ref|XP_006467050.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X2 [Citrus sinensis]
           gi|568825367|ref|XP_006467051.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X3 [Citrus sinensis]
          Length = 465

 Score =  152 bits (383), Expect = 9e-35
 Identities = 86/193 (44%), Positives = 117/193 (60%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGKIPPA R A S + L  L  P  + AL+    SP       + PSKK+   ++ S+ K
Sbjct: 1   MGKIPPALRTAISSNNL--LKTPAPTQALK----SPHQFLYKNENPSKKSAA-ANKSEKK 53

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
           +  P++ F+SP LSEA  +FNSL+++T  TP D  F+N                  LNHM
Sbjct: 54  TPAPAVIFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHM 113

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 566
           +K +P+F P+R TYH LL QSC +PD  S S++ + L+LMT NG+PPNQ +TD+AVRSLC
Sbjct: 114 IKANPSFNPDRSTYHILLAQSCQAPDN-SFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLC 172

Query: 567 GCGREEHAIELIK 605
              R + AIEL+K
Sbjct: 173 SVNRLDDAIELVK 185


>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score =  151 bits (382), Expect = 1e-34
 Identities = 90/198 (45%), Positives = 115/198 (58%), Gaps = 5/198 (2%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQ-----IPSPISNFPTQKKPSKKNPIKSD 191
           MGKIPP+FR   S  P++TLLK N  A L +Q      P    +FP +K+P      K  
Sbjct: 69  MGKIPPSFR--TSTVPVTTLLK-NPPAVLPKQSTVLETPQKPHHFP-KKRPQPSGKTKKT 124

Query: 192 DSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXX 371
            +  +     + F SPNL +AK LF S I++T  TP D  F+N                 
Sbjct: 125 RTPIEDPKSPVIFNSPNLLDAKKLFAS-ITTTSTTPLDFRFHNALLQSYSSISTVNDSIS 183

Query: 372 XLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVA 551
            L HM+K  P+F P R TYH LL QSC SP+ + LS VH+ LNLM  +GFPP++V+TD+A
Sbjct: 184 FLRHMIKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDIA 242

Query: 552 VRSLCGCGREEHAIELIK 605
           VRSLC  GREEHAIEL+K
Sbjct: 243 VRSLCSAGREEHAIELVK 260


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  151 bits (382), Expect = 1e-34
 Identities = 90/198 (45%), Positives = 115/198 (58%), Gaps = 5/198 (2%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQ-----IPSPISNFPTQKKPSKKNPIKSD 191
           MGKIPP+FR   S  P++TLLK N  A L +Q      P    +FP +K+P      K  
Sbjct: 1   MGKIPPSFR--TSTVPVTTLLK-NPPAVLPKQSTVLETPQKPHHFP-KKRPQPSGKTKKT 56

Query: 192 DSKTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXX 371
            +  +     + F SPNL +AK LF S I++T  TP D  F+N                 
Sbjct: 57  RTPIEDPKSPVIFNSPNLLDAKKLFAS-ITTTSTTPLDLRFHNALLQSYSSISTVNDSIS 115

Query: 372 XLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVA 551
            L HM+K  P+F P R TYH LL QSC SP+ + LS VH+ LNLM  +GFPP++V+TD+A
Sbjct: 116 FLRHMIKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDIA 174

Query: 552 VRSLCGCGREEHAIELIK 605
           VRSLC  GREEHAIEL+K
Sbjct: 175 VRSLCSAGREEHAIELVK 192


>ref|XP_006425315.1| hypothetical protein CICLE_v10025555mg [Citrus clementina]
           gi|557527305|gb|ESR38555.1| hypothetical protein
           CICLE_v10025555mg [Citrus clementina]
          Length = 465

 Score =  147 bits (371), Expect = 2e-33
 Identities = 82/193 (42%), Positives = 113/193 (58%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGKIPPA R A S + L        + A  + + SP       +  SKK+   ++ S+ K
Sbjct: 1   MGKIPPALRTAISSNTL------RKTPARTQALKSPHQFLNKNENRSKKSAA-ANKSEKK 53

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
           +  P+  F+SP LSEA  +FNSL+++T  TP D  F+N                  LNHM
Sbjct: 54  TPAPAAIFKSPELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHM 113

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 566
           +K +P+F P+R TYH LL QSC +PD  S S++ + L+LMT NG+PPNQ +TD+AVRSLC
Sbjct: 114 IKANPSFNPDRSTYHILLAQSCQAPDN-SFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLC 172

Query: 567 GCGREEHAIELIK 605
              R + AIEL+K
Sbjct: 173 SVNRLDDAIELVK 185


>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 464

 Score =  144 bits (363), Expect = 2e-32
 Identities = 85/193 (44%), Positives = 112/193 (58%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGKIPP+FR A S S +      + +A     IP       T+K+PS+ +  K+  +   
Sbjct: 1   MGKIPPSFRPAISNSLIKRQPLESPTA-----IPHQFPEKTTKKRPSQHS--KTAQASLG 53

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
           S      F+SP+LS AK +FNS++ +TK  P D  F+N                  L+HM
Sbjct: 54  SRKAEPLFKSPDLSSAKKVFNSIVVTTK-APIDLRFHNTLLQSYASVSTVNDSISFLHHM 112

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 566
           VK HP+F P+R TYH LL QSC +PD  SLS V + LNLM  NG  PNQV+TDVA+RSLC
Sbjct: 113 VKAHPSFSPDRSTYHILLSQSCKAPDS-SLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLC 171

Query: 567 GCGREEHAIELIK 605
             GR +HA+EL+K
Sbjct: 172 EAGRIDHAVELVK 184


>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform X1 [Cicer arietinum]
           gi|502155526|ref|XP_004510106.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform X2 [Cicer arietinum]
          Length = 468

 Score =  135 bits (339), Expect = 1e-29
 Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPI-SNFPTQKKPSKKNPIKSDDSKT 203
           MGKIPP+FR A S   L        S++     P  I SNFP      K   ++ +    
Sbjct: 1   MGKIPPSFRSALSNPNLINSSSSLPSSSKPRYFPKKIPSNFP-----GKSRKLQQESQPP 55

Query: 204 KSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNH 383
           K   P   F+SP L EAKS+FNS++ S+ N P+D  F+N                  L H
Sbjct: 56  K---PVSLFKSPCLQEAKSIFNSIVKSS-NVPNDFRFHNSLLQSYASVSTINDSIAFLRH 111

Query: 384 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 563
           M K HP+F P++ TYH LL QSC S D  +LS +H+ LNLM ++G  P++V+ D+AVRSL
Sbjct: 112 MTKTHPSFTPDKSTYHILLTQSCKSTDT-TLSQIHQTLNLMVSDGVSPDKVTVDLAVRSL 170

Query: 564 CGCGREEHAIELIK 605
           C  GR + A+ELIK
Sbjct: 171 CSAGRMDEAVELIK 184


>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
          Length = 464

 Score =  133 bits (335), Expect = 3e-29
 Identities = 81/193 (41%), Positives = 108/193 (55%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGKIPP+ R + S S    L+K  +S    E       +FP  KK +KK P +  + KT+
Sbjct: 1   MGKIPPSLRSSVSTS----LIKKPSSLVPNESPSHRPHHFP--KKTTKKIPPQLSE-KTR 53

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
                  F S NLS+AK +FNS++++TK  P D   +N                   NHM
Sbjct: 54  EPTFRNPFTSANLSDAKKVFNSIVTTTK-VPLDLRVHNALLQSYASISTLNDSISLFNHM 112

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 566
           +K HP F P+R TYH LL QSC +PD+ +L  VH++LN M  NGF PN+V+TD+AVRSLC
Sbjct: 113 IKTHPTFSPDRSTYHVLLSQSCKAPDQ-TLKPVHQVLNFMLTNGFSPNKVTTDIAVRSLC 171

Query: 567 GCGREEHAIELIK 605
                  A+ELIK
Sbjct: 172 SSNNVGLAVELIK 184


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520709|gb|AET01163.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  132 bits (333), Expect = 6e-29
 Identities = 80/196 (40%), Positives = 113/196 (57%), Gaps = 3/196 (1%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQ-KKPSKKNPIKSDDSKT 203
           MGKIPP+FR A S   L      + S++L    P P  +FP + +KP +K   +   S++
Sbjct: 1   MGKIPPSFRSALSNPNLI-----HRSSSLIPSSPKP-HHFPNKTRKPHQKQ--QQSQSQS 52

Query: 204 KSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNH 383
           +S  P   F+SPNL EAKS+FNS ++S+ N P DS F+N                  L H
Sbjct: 53  QSPKPVSVFKSPNLQEAKSIFNSFVNSS-NAPIDSRFHNSLLQSYASISTINDSIAFLRH 111

Query: 384 MVKKHPAFCPNRFTYHTLLVQSCSSPDEE--SLSNVHRILNLMTNNGFPPNQVSTDVAVR 557
           M K HP+F P++ TYH LL   C S D +  +LS +H+ LNLM ++G  P++ + D+AVR
Sbjct: 112 MTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVR 171

Query: 558 SLCGCGREEHAIELIK 605
           SLC   R + A+ELIK
Sbjct: 172 SLCTADRVDDAVELIK 187


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  132 bits (333), Expect = 6e-29
 Identities = 81/196 (41%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKP---SKKNPIKSDDS 197
           MGK+PP+ R A S + L  L KPN               FP  +KP   SKK  ++    
Sbjct: 1   MGKVPPSLRSAVSTTAL--LRKPNP--------------FPPPEKPHYLSKKTKLQLSQK 44

Query: 198 KTKSNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXL 377
                     F+SP L+EAK +FNSLIS+T+  P D  F++                  L
Sbjct: 45  IPTPIQQKRLFKSPELNEAKEIFNSLISTTR-VPLDLRFHHSFLQSYSSISTIDDSISLL 103

Query: 378 NHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVR 557
            HM+K  P+F P   TYH LL QSC +PD  +LS VH+ILNLM NNGF P QV+ D+AVR
Sbjct: 104 RHMIKTLPSFTPTISTYHILLSQSCKAPDP-TLSPVHQILNLMVNNGFMPTQVTVDIAVR 162

Query: 558 SLCGCGREEHAIELIK 605
           +LC  G+E+ A++L+K
Sbjct: 163 ALCSAGKEDDAVKLVK 178


>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484989|gb|AES66192.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  130 bits (328), Expect = 2e-28
 Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 3/195 (1%)
 Frame = +3

Query: 30  GKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQ-KKPSKKNPIKSDDSKTK 206
           GKIPP+FR A S   L      + S++L    P P  +FP + +KP +K   +   S+++
Sbjct: 18  GKIPPSFRSALSNPNLI-----HRSSSLIPSSPKP-HHFPNKTRKPHQKQ--QQSQSQSQ 69

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
           S  P   F+SPNL EAKS+FNS ++S+ N P DS F+N                  L HM
Sbjct: 70  SPKPVSVFKSPNLQEAKSIFNSFVNSS-NAPIDSRFHNSLLQSYASISTINDSIAFLRHM 128

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEE--SLSNVHRILNLMTNNGFPPNQVSTDVAVRS 560
            K HP+F P++ TYH LL   C S D +  +LS +H+ LNLM ++G  P++ + D+AVRS
Sbjct: 129 TKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRS 188

Query: 561 LCGCGREEHAIELIK 605
           LC   R + A+ELIK
Sbjct: 189 LCTADRVDDAVELIK 203


>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222855886|gb|EEE93433.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 462

 Score =  130 bits (326), Expect = 4e-28
 Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 1/194 (0%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGK PP+FR A S    ST L  NT +  Q+Q       FP  KK +KKN  K  +++T 
Sbjct: 1   MGKFPPSFRSAIS----STSLIKNTPSQQQQQP----HYFP--KKLTKKNSPKPHETETP 50

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDS-NFYNXXXXXXXXXXXXXXXXXXLNH 383
               S+ F++ +L+EAKSLFNS IS+TK    D+   +N                  L+H
Sbjct: 51  PPHKSL-FKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSYTSISTLDDSISLLDH 109

Query: 384 MVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSL 563
           MVK  P+  P+R TYH LL QSC  PD  SLS+  ++LNLM N GF PNQ + DVA+RSL
Sbjct: 110 MVKTLPSLSPDRSTYHVLLSQSCREPDS-SLSSAQKVLNLMINKGFKPNQFTVDVAIRSL 168

Query: 564 CGCGREEHAIELIK 605
           C  GR + AI L+K
Sbjct: 169 CSAGRVDDAILLVK 182


>ref|XP_004287745.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like isoform 1 [Fragaria vesca subsp. vesca]
           gi|470102614|ref|XP_004287746.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17670-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 450

 Score =  126 bits (317), Expect = 4e-27
 Identities = 76/193 (39%), Positives = 109/193 (56%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGK+ P+ R   S S +    KP +S+          S+ P      K  P  S  ++T+
Sbjct: 1   MGKMSPSVRSLVSTSLIK---KPPSSSP---------SHKPHTHLTGKPPPQNSGKTQTQ 48

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
           ++ P   F SPNLS+AK +FNS+ +ST+N P D   +N                   NHM
Sbjct: 49  THNP---FTSPNLSDAKRVFNSIATSTRN-PLDLRRHNALLQSYAAISTVNDSIAFFNHM 104

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 566
           +K  PAF P R TYH LL QSC+ PD+ +L +VH++LN M NNGF P++V+TD+AVRSLC
Sbjct: 105 IKTQPAFSPERSTYHILLAQSCTVPDQ-TLQSVHQVLNFMVNNGFHPDKVTTDIAVRSLC 163

Query: 567 GCGREEHAIELIK 605
             G  + A++++K
Sbjct: 164 LAGHVDEAVQVMK 176


>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329915|gb|EFH60334.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 462

 Score =  122 bits (305), Expect = 1e-25
 Identities = 76/195 (38%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGK+P +FR      P + L+K  T +      P+P  +F  + + + ++  K  ++   
Sbjct: 1   MGKVPSSFRAM----PANLLVKKPTPSP-----PAPPRDF--RNRAAVRDSTKLPENTQA 49

Query: 207 SNVPSIT--FESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLN 380
              PS+   F+SPNLS+AKSLFNS I++T   P D  F+N                    
Sbjct: 50  PREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFQ 108

Query: 381 HMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRS 560
           H++K  P F P R T+  LL  +C +PD  S+SNVHR+LNLM NNG  P+QV+TD+AVRS
Sbjct: 109 HILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRS 167

Query: 561 LCGCGREEHAIELIK 605
           LC  GR + A +L+K
Sbjct: 168 LCETGRVDEAKDLMK 182


>ref|NP_973481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|330251569|gb|AEC06663.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 349

 Score =  120 bits (301), Expect = 3e-25
 Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGK+P +FR      P + L++  T +      P+P  +F        +  +  D +K  
Sbjct: 1   MGKVPSSFR----SMPANLLVRKTTPSP-----PAPPRDF------RNRTAVGGDSAKLP 45

Query: 207 SNV-----PSIT--FESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXX 365
            N      PS+   F+SPNLS+AKSLFNS I++T   P D  F+N               
Sbjct: 46  QNTQAPREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYGSIAVVNDT 104

Query: 366 XXXLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 545
                H++K  P F P R T+  LL  +C +PD  S+SNVHR+LNLM NNG  P+QV+TD
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTD 163

Query: 546 VAVRSLCGCGREEHAIELIK 605
           +AVRSLC  GR + A +L+K
Sbjct: 164 IAVRSLCETGRVDEAKDLMK 183


>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
           [Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251570|gb|AEC06664.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 463

 Score =  120 bits (301), Expect = 3e-25
 Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGK+P +FR      P + L++  T +      P+P  +F        +  +  D +K  
Sbjct: 1   MGKVPSSFR----SMPANLLVRKTTPSP-----PAPPRDF------RNRTAVGGDSAKLP 45

Query: 207 SNV-----PSIT--FESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXX 365
            N      PS+   F+SPNLS+AKSLFNS I++T   P D  F+N               
Sbjct: 46  QNTQAPREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYGSIAVVNDT 104

Query: 366 XXXLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 545
                H++K  P F P R T+  LL  +C +PD  S+SNVHR+LNLM NNG  P+QV+TD
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTD 163

Query: 546 VAVRSLCGCGREEHAIELIK 605
           +AVRSLC  GR + A +L+K
Sbjct: 164 IAVRSLCETGRVDEAKDLMK 183


>gb|AAM62704.1| unknown [Arabidopsis thaliana]
          Length = 463

 Score =  119 bits (299), Expect = 5e-25
 Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGK+P +FR      P + L++  T +      P+P  +F        +  +  D +K  
Sbjct: 1   MGKVPSSFRSI----PANLLVRKTTPSP-----PAPPRDF------RNRTAVGGDSAKLP 45

Query: 207 SNV-----PSIT--FESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXX 365
            N      PS+   F+SPNLS+AKSLFNS I++T   P D  F+N               
Sbjct: 46  HNTQAPREPSLRNPFKSPNLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAVVDDT 104

Query: 366 XXXLNHMVKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTD 545
                H++K  P F P R T+  LL  +C +PD  S+SNVHR+LNLM NNG  P+QV+TD
Sbjct: 105 VKFFQHIMKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTD 163

Query: 546 VAVRSLCGCGREEHAIELIK 605
           +AVRSLC  GR + A +L+K
Sbjct: 164 IAVRSLCETGRVDEAKDLMK 183


>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
           gi|557110430|gb|ESQ50721.1| hypothetical protein
           EUTSA_v10022683mg [Eutrema salsugineum]
          Length = 462

 Score =  119 bits (297), Expect = 8e-25
 Identities = 78/193 (40%), Positives = 103/193 (53%)
 Frame = +3

Query: 27  MGKIPPAFRRAASQSPLSTLLKPNTSAALQEQIPSPISNFPTQKKPSKKNPIKSDDSKTK 206
           MGKIP +FR   S    + L+K  TS  L    P    N   +++  K +      S+  
Sbjct: 1   MGKIPSSFRSMTS----THLVKKPTSCPLAP--PRDPRNRIARRESVKISHHTDQVSREP 54

Query: 207 SNVPSITFESPNLSEAKSLFNSLISSTKNTPSDSNFYNXXXXXXXXXXXXXXXXXXLNHM 386
              P   F++P+LS+AKSLFNS I++T   P D  F+N                    H+
Sbjct: 55  LRNP---FKTPDLSDAKSLFNS-IAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFLHI 110

Query: 387 VKKHPAFCPNRFTYHTLLVQSCSSPDEESLSNVHRILNLMTNNGFPPNQVSTDVAVRSLC 566
           +K  P F P   T+H LL  +C +PD  SLSNVH +LNLM NNG  PNQV+TD+AVRSLC
Sbjct: 111 LKSQPGFSPEHSTFHILLSHACRAPDS-SLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLC 169

Query: 567 GCGREEHAIELIK 605
             GR   A++LIK
Sbjct: 170 ESGRISEAMDLIK 182