BLASTX nr result

ID: Rehmannia24_contig00008129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00008129
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl...    57   2e-06
emb|CBI28372.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002326111.1| hypothetical protein POPTR_0019s14050g [Popu...    56   4e-06
ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, ch...    55   1e-05

>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
           vinifera]
          Length = 299

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   LLKEYVAREKKKIEERAASQKASEAVTKCLGEYQ 104
           LLKEYV REKKK EER  SQKA+EA+TKCLGEY+
Sbjct: 260 LLKEYVDREKKKREERVESQKANEAITKCLGEYE 293


>emb|CBI28372.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   LLKEYVAREKKKIEERAASQKASEAVTKCLGEYQ 104
           LLKEYV REKKK EER  SQKA+EA+TKCLGEY+
Sbjct: 204 LLKEYVDREKKKREERVESQKANEAITKCLGEYE 237


>ref|XP_002326111.1| hypothetical protein POPTR_0019s14050g [Populus trichocarpa]
           gi|222862986|gb|EEF00493.1| hypothetical protein
           POPTR_0019s14050g [Populus trichocarpa]
          Length = 296

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   LLKEYVAREKKKIEERAASQKASEAVTKCLGEYQ 104
           LLKEYV REKKK EERA SQKASE VTKCLGE Q
Sbjct: 259 LLKEYVDREKKKQEERAESQKASETVTKCLGEPQ 292


>ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, chloroplastic-like
           [Cucumis sativus] gi|449493105|ref|XP_004159194.1|
           PREDICTED: protein THYLAKOID FORMATION 1,
           chloroplastic-like [Cucumis sativus]
          Length = 298

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   LLKEYVAREKKKIEERAASQKASEAVTKCLGEY 101
           LLKEYV REKKK +ERA SQ A+EA+TKCLGEY
Sbjct: 260 LLKEYVDREKKKRDERAGSQTANEAITKCLGEY 292


Top