BLASTX nr result
ID: Rehmannia24_contig00008106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00008106
(648 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera] 76 1e-11
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 74 4e-11
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 73 8e-11
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 73 8e-11
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 73 8e-11
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera] 72 1e-10
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera] 72 1e-10
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 70 4e-10
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 69 9e-10
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 65 2e-08
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 64 3e-08
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 64 4e-08
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 63 6e-08
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 63 8e-08
ref|XP_004252200.1| PREDICTED: uncharacterized protein LOC101262... 62 1e-07
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 60 5e-07
gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana] 56 2e-06
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 57 5e-06
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 56 8e-06
>emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]
Length = 992
Score = 75.9 bits (185), Expect = 1e-11
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 55/204 (26%)
Frame = -2
Query: 518 KECDWSG*RKDGLYFF---RGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQF 348
+E +G R+DGLY+F G + + ++LELWHK++GHPSEKV+K LP +S
Sbjct: 345 RELIGTGVRRDGLYYFGRAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL 404
Query: 347 TRKENKACGVCQRAKQTREHNDEVELYRDTSSGMESNA-----SSTEVVVEEQLTRMP-- 189
NKAC +C RAK R+ +++ + + +G E S+T ++ + P
Sbjct: 405 KGSLNKACEICFRAKHPRDKFPLMKVVQ-SDNGTEFKCLLDYFSATGILFQTSCVGTPQQ 463
Query: 188 ----------PGGHHADEGNSLE----------------------GANELG--------- 132
PG + N + G + LG
Sbjct: 464 NGRDVFPFGNPGAVNIIPDNIVPTVNVEIDTHQDLSPGPKVIPTVGLDSLGLDNTSNGQS 523
Query: 131 ----RGKRTKTPSVLLRDFVMHTV 72
+G R K PSVLLRDFV HTV
Sbjct: 524 APMGKGMRDKFPSVLLRDFVTHTV 547
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 73.9 bits (180), Expect = 4e-11
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = -2
Query: 542 IFLHGPNYKECDWSG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIK 372
I L + +E +G R+DGLY+F G V+ ++V + ++LELWHK++GHPSEKV+K
Sbjct: 350 ITLKNXHTRELIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVK 409
Query: 371 FLPNISQFTRKENKACGVCQRAKQTRE 291
LP +S NKAC +C RAK R+
Sbjct: 410 LLPPVSNLKGSLNKACEICFRAKHPRD 436
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 72.8 bits (177), Expect = 8e-11
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 518 KECDWSG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQF 348
+E +G R+DGLY+F G V+ ++V + ++LELWHK++GHPSEKV+K LP +S
Sbjct: 145 RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL 204
Query: 347 TRKENKACGVCQRAKQTRE 291
NKAC +C RAK R+
Sbjct: 205 KGSLNKACEICFRAKHPRD 223
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 72.8 bits (177), Expect = 8e-11
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 518 KECDWSG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQF 348
+E +G R+DGLY+F G V+ ++V + ++LELWHK++GHPSEKV+K LP +S
Sbjct: 478 RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL 537
Query: 347 TRKENKACGVCQRAKQTRE 291
NKAC +C RAK R+
Sbjct: 538 KGSLNKACEICFRAKHPRD 556
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 72.8 bits (177), Expect = 8e-11
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 518 KECDWSG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQF 348
+E +G R+DGLY+F G V+ ++V + ++LELWHK++GHPSEKV+K LP +S
Sbjct: 231 RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL 290
Query: 347 TRKENKACGVCQRAKQTRE 291
NKAC +C RAK R+
Sbjct: 291 KGSLNKACEICFRAKHXRD 309
>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 72.4 bits (176), Expect = 1e-10
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = -2
Query: 518 KECDWSG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQF 348
+E +G R+DGLY+F G V ++V + ++LELWHK++GHPSEKV+K LP +S
Sbjct: 477 RELIGTGVRRDGLYYFGGAEGDSVEHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL 536
Query: 347 TRKENKACGVCQRAKQTRE 291
NKAC +C RAK R+
Sbjct: 537 KGSLNKACEICFRAKHPRD 555
>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
Length = 1149
Score = 72.4 bits (176), Expect = 1e-10
Identities = 34/99 (34%), Positives = 56/99 (56%)
Frame = -2
Query: 587 RFCLLRNPNPNPAVGIFLHGPNYKECDWSG*RKDGLYFFRGVPLVRALTVDGDNSLELWH 408
+FC++++ + +G +G +++GLYF G V A ++G S ELWH
Sbjct: 392 KFCVIQDRSTRKVIG-------------AGEQREGLYFLNGAASVHAFKMNGVTSFELWH 438
Query: 407 KQLGHPSEKVIKFLPNISQFTRKENKACGVCQRAKQTRE 291
+++G+PS KV+ +P + + ENK C VC AKQTR+
Sbjct: 439 RRMGYPSFKVLGLIPEVVCNNKNENKVCDVCFXAKQTRK 477
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 70.5 bits (171), Expect = 4e-10
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = -2
Query: 518 KECDWSG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQF 348
+E +G R+DGLY+F G V+ ++V + ++LELWH ++GHPSEKV+K LP +S
Sbjct: 226 RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHNRMGHPSEKVVKLLPLVSNI 285
Query: 347 TRKENKACGVCQRAKQTRE 291
NKAC +C RAK R+
Sbjct: 286 KGSLNKACEICFRAKHPRD 304
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 69.3 bits (168), Expect = 9e-10
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -2
Query: 503 SG*RKDGLYFFRGVP--LVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQFTRKEN 333
+G R+DGLY+F G V+ ++V + ++LELWHK++ HPSEKV+K LP +S N
Sbjct: 195 TGVRRDGLYYFGGAEGDSVQHVSVHNAASTLELWHKRMRHPSEKVVKLLPPVSNLKGSLN 254
Query: 332 KACGVCQRAKQTRE 291
KAC +C RAK R+
Sbjct: 255 KACEICFRAKHPRD 268
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 64.7 bits (156), Expect = 2e-08
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = -2
Query: 488 DGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQFTRKE---NKACGV 318
+GLYF +GV +RA S ELWH+++GHPS +V+ + + R + NK C +
Sbjct: 299 EGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDSVGRNDGXKNKFCDI 358
Query: 317 CQRAKQTRE 291
C RA+QTRE
Sbjct: 359 CFRAQQTRE 367
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 64.3 bits (155), Expect = 3e-08
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = -2
Query: 503 SG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLP--NISQFTRKENK 330
+G R G + FR + ++TV + + ELWH ++GHP+ +V+ +P ++S + NK
Sbjct: 362 AGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPESSVSVSSTHLNK 421
Query: 329 ACGVCQRAKQTR 294
AC VC RAKQTR
Sbjct: 422 ACDVCHRAKQTR 433
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = -2
Query: 548 VGIFLHGPNYKECDWSG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKF 369
V + L N + +G + +GLYF +GV L+ A G S ELWH+++GHPS +V+
Sbjct: 208 VPVGLQDRNSRMLIGTGKQCEGLYFLKGVALICAYETTGIASYELWHRRMGHPSSRVVDL 267
Query: 368 LPNISQFTRKE---NKACGVCQRAKQTRE 291
+ + + NK C +C RA+QTRE
Sbjct: 268 IYEVDSVGGNDGVKNKFCDICFRAQQTRE 296
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 63.2 bits (152), Expect = 6e-08
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = -2
Query: 503 SG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQFTRK--ENK 330
+G +GLYFFRGV A+T S +LWH++LGHPS K + LP S T ++K
Sbjct: 477 AGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLP-FSDVTSSTFDSK 535
Query: 329 ACGVCQRAKQTRE 291
C +C +AKQTR+
Sbjct: 536 TCEICIQAKQTRD 548
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 62.8 bits (151), Expect = 8e-08
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = -2
Query: 503 SG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQFTRK--ENK 330
+G +++GLYFFRG V ++T D+S +LWH +LGHPS KV+K L + S T ++K
Sbjct: 442 AGKQQNGLYFFRGTETVASMT-RMDSSSQLWHCRLGHPSSKVLKLL-SFSDSTGHAFDSK 499
Query: 329 ACGVCQRAKQTRE 291
C +C +AKQTR+
Sbjct: 500 TCEICIKAKQTRD 512
>ref|XP_004252200.1| PREDICTED: uncharacterized protein LOC101262997 [Solanum
lycopersicum]
Length = 172
Score = 62.4 bits (150), Expect = 1e-07
Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Frame = -2
Query: 500 G*RKDGLYFFRGVPLVRALTV-DGDNSLELWHKQLGHPSEKVIKFLPNISQFTRKE--NK 330
G R+DGLY+FR VP +A+T +G +S LW K+LGHPS +V K + N+ E NK
Sbjct: 99 GERRDGLYYFRVVP--QAMTKKNGTDSFNLWRKRLGHPSLRVTKLVSNVISANDSELMNK 156
Query: 329 ACGVCQRAKQTRE 291
C V +RAKQT +
Sbjct: 157 TCDVFKRAKQTND 169
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 60.1 bits (144), Expect = 5e-07
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = -2
Query: 503 SG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQFTRKE---N 333
+G +++GLYF +GV +RA S ELW++++GHPS K++ + + R + N
Sbjct: 387 AGEQREGLYFLKGVTPIRAYKTTSIASYELWNRRMGHPSSKIVDLIYEVDSVGRNDGVKN 446
Query: 332 KACGVCQRAKQTRE 291
K C + RA+QTRE
Sbjct: 447 KFCDIFFRAQQTRE 460
>gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana]
Length = 1158
Score = 56.2 bits (134), Expect(2) = 2e-06
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = -2
Query: 503 SG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQFTRK--ENK 330
+G + +GLYFFRG+ + + +++WH++LGHPS K ++ L S F+ ++K
Sbjct: 273 AGEQLNGLYFFRGLGVAAPVQHKDSTPIDVWHRRLGHPSSKAMEML-KFSDFSSSGFDSK 331
Query: 329 ACGVCQRAKQTRE 291
C +C AKQTR+
Sbjct: 332 DCEICISAKQTRD 344
Score = 21.9 bits (45), Expect(2) = 2e-06
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3
Query: 529 DRITRNVIGAGD 494
DRIT+ +IGAG+
Sbjct: 264 DRITKTLIGAGE 275
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 57.0 bits (136), Expect = 5e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = -2
Query: 539 FLHGPNYKECDWSG*RKDGLYFFRGVPLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPN 360
FL + K SG + G+Y+ V + T + D+ LWH++LGHPS V+ LP
Sbjct: 488 FLQDRSSKTLIGSGEERGGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPL 547
Query: 359 ISQFTRK-ENKACGVCQRAKQTRE 291
S+ + + +C VC RAKQTRE
Sbjct: 548 FSKTSSTVTSHSCDVCFRAKQTRE 571
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 56.2 bits (134), Expect = 8e-06
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Frame = -2
Query: 503 SG*RKDGLYFFRGV--PLVRALTVDGDNSLELWHKQLGHPSEKVIKFLPNISQFTRKENK 330
+G ++G+Y+F GV P V + D S +LWH++LGHPS V+ LP ++ ++ +K
Sbjct: 470 AGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPECNRSSQGFDK 529
Query: 329 --ACGVCQRAKQTRE 291
+C C R+KQTRE
Sbjct: 530 IDSCDTCFRSKQTRE 544