BLASTX nr result
ID: Rehmannia24_contig00007986
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00007986
(643 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 46 2e-12
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 39 4e-07
ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding sub... 44 6e-07
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula] 45 6e-07
ref|XP_003598569.1| hypothetical protein MTR_3g015660 [Medicago ... 43 2e-06
ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago ... 42 3e-06
ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago ... 43 3e-06
ref|XP_003606164.1| hypothetical protein MTR_4g053890 [Medicago ... 45 5e-06
ref|XP_003606360.1| hypothetical protein MTR_4g058660 [Medicago ... 45 5e-06
ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 38 7e-06
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 46.2 bits (108), Expect(3) = 2e-12
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = -3
Query: 635 GRVYAIREFIVANFTDKYKTAAGKYKILFYGKTNVFEMFDKSFPKFMYVLRDFREVARVE 456
G+VY+IR F+V + YKT+ KY + FY KT V E+ D FP M+ L+ ++ +
Sbjct: 73 GQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRELKDIVFPSHMFRLQPLSQLKQKI 132
Query: 455 NVDE 444
+++E
Sbjct: 133 DINE 136
Score = 40.4 bits (93), Expect(3) = 2e-12
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = -1
Query: 157 RLTCTLWEEYVDRILPYLEDHGFQPIIVILQMCRAKI 47
++ CT+W+++V ++ P+ + P+I++LQ CR K+
Sbjct: 176 QIKCTVWDDHVSKLEPFYQSTKQDPVIILLQFCRVKV 212
Score = 31.6 bits (70), Expect(3) = 2e-12
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 339 DIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
D+IG VV + + Q K I G+ R I+ LED E
Sbjct: 141 DLIGMVVEINTPQDKVIAGKATRLIDFLLEDTE 173
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503881|gb|AES85084.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503938|gb|AES85141.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 39.3 bits (90), Expect(3) = 4e-07
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDHG-FQPIIVILQMCRAKIFRG 38
+ R+ CTLW Y +R+ +L H P+IV++Q C+ K ++G
Sbjct: 172 SRRVHCTLWANYAERMNSFLAAHDPSSPVIVLIQQCKLKKYQG 214
Score = 31.2 bits (69), Expect(3) = 4e-07
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -2
Query: 348 K*TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
K D+IG VV + +++ GR + +++TL+D E
Sbjct: 136 KVVDVIGQVVERDELKERDVNGRRSKIMDLTLQDSE 171
Score = 28.9 bits (63), Expect(3) = 4e-07
Identities = 14/68 (20%), Positives = 28/68 (41%)
Frame = -3
Query: 641 QEGRVYAIREFIVANFTDKYKTAAGKYKILFYGKTNVFEMFDKSFPKFMYVLRDFREVAR 462
+EG Y I +V KY+ ++K+ T F++ + P + F E+
Sbjct: 71 EEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAATIPLNHFDFMPFNEILE 130
Query: 461 VENVDETM 438
E ++ +
Sbjct: 131 AEREEKVV 138
>ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355480294|gb|AES61497.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 524
Score = 43.5 bits (101), Expect(3) = 6e-07
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+ D+I+ + +H P+++ILQ C+ + + G
Sbjct: 172 NNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTRKYLG 214
Score = 30.4 bits (67), Expect(3) = 6e-07
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 339 DIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
D+IG+V+ + E GR + I++TL+DLE
Sbjct: 139 DVIGHVIERGDVKETENEGRKSKVIDLTLQDLE 171
Score = 25.0 bits (53), Expect(3) = 6e-07
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -3
Query: 641 QEGRVYAIREFIVANFTDKYKTAAGKYKILFYGKTNVFEMFDKSFPKFMYVLRDFREVAR 462
+EG Y + IVA YK + K+K+ ++ + + P ++ F E+
Sbjct: 71 EEGATYELHNAIVAINEGPYKITSHKHKLGMLHNSSFTKKDLPTIPINVFDFMSFNEILS 130
Query: 461 VENVDET 441
NV+ET
Sbjct: 131 -SNVEET 136
>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
Length = 327
Score = 44.7 bits (104), Expect(2) = 6e-07
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+VD+I+ + +H P I+ILQ C+ +++ G
Sbjct: 173 NNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 215
Score = 35.0 bits (79), Expect(2) = 6e-07
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2
Query: 342 TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
TD+IG+V+ + + E GR R I++TLEDLE
Sbjct: 139 TDVIGHVIERGNIRETEKDGRKSRVIDLTLEDLE 172
>ref|XP_003598569.1| hypothetical protein MTR_3g015660 [Medicago truncatula]
gi|355487617|gb|AES68820.1| hypothetical protein
MTR_3g015660 [Medicago truncatula]
Length = 284
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+ D+I+ + +H P I+ILQ C+ +++ G
Sbjct: 172 NNRLHCSLWGEHADKIVTFFGNHDNDTPTILILQFCKTRMYLG 214
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 342 TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
TD+IG+V+ + E GR R I++TLEDLE
Sbjct: 138 TDVIGHVIERGDIRETEKDGRKSRVIDLTLEDLE 171
>ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago truncatula]
gi|355488970|gb|AES70173.1| hypothetical protein
MTR_3g048980 [Medicago truncatula]
Length = 486
Score = 42.4 bits (98), Expect(3) = 3e-06
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+ D+I+ + +H P+++ILQ C+ + G
Sbjct: 172 NNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTHKYLG 214
Score = 30.4 bits (67), Expect(3) = 3e-06
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 339 DIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
D+IG+V+ + E GR + I++TL+DLE
Sbjct: 139 DVIGHVIERGDVKETENEGRKSKVIDLTLQDLE 171
Score = 23.9 bits (50), Expect(3) = 3e-06
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = -3
Query: 641 QEGRVYAIREFIVANFTDKYKTAAGKYKILFYGKTNVFEMFDKSFPKFMYVLRDFREVAR 462
+EG Y + IV YK + K+K+ ++ + + P ++ F E+
Sbjct: 71 EEGATYELHNAIVGINEGPYKITSHKHKLGMLHNSSFTKKDLPTLPINVFEFMSFNEILS 130
Query: 461 VENVDET 441
NV+ET
Sbjct: 131 -SNVEET 136
>ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago truncatula]
gi|355504530|gb|AES85733.1| hypothetical protein
MTR_137s0043 [Medicago truncatula]
Length = 372
Score = 43.1 bits (100), Expect(2) = 3e-06
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+ D+I+ + +H P I+ILQ C+ +++ G
Sbjct: 153 NNRLHCSLWGEHADKIVTFFGNHDNDTPTILILQFCKTRMYLG 195
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 342 TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
TD+IG+V+ + E GR R I++TLEDLE
Sbjct: 119 TDVIGHVIERGDIRETEKDGRKNRVIDLTLEDLE 152
>ref|XP_003606164.1| hypothetical protein MTR_4g053890 [Medicago truncatula]
gi|355507219|gb|AES88361.1| hypothetical protein
MTR_4g053890 [Medicago truncatula]
Length = 359
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+VD+I+ + +H P I+ILQ C+ +++ G
Sbjct: 156 NNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 198
Score = 32.0 bits (71), Expect(2) = 5e-06
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 342 TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
TD+IG+V+ + + E R R I++TLEDLE
Sbjct: 122 TDVIGHVIERGNIRETEKDERKSRVIDLTLEDLE 155
>ref|XP_003606360.1| hypothetical protein MTR_4g058660 [Medicago truncatula]
gi|355507415|gb|AES88557.1| hypothetical protein
MTR_4g058660 [Medicago truncatula]
Length = 326
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDH-GFQPIIVILQMCRAKIFRG 38
NNRL C+LW E+VD+I+ + +H P I+ILQ C+ +++ G
Sbjct: 172 NNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 214
Score = 32.0 bits (71), Expect(2) = 5e-06
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 342 TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
TD+IG+V+ + + E R R I++TLEDLE
Sbjct: 138 TDVIGHVIERGNIRETEKDERKSRVIDLTLEDLE 171
>ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355522143|gb|AET02597.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 637
Score = 38.1 bits (87), Expect(3) = 7e-06
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 163 NNRLTCTLWEEYVDRILPYLEDHG-FQPIIVILQMCRAKIFRG 38
+ R+ CTLW Y +R+ +L H P++V++Q C+ K ++G
Sbjct: 172 SRRVRCTLWANYAERMNSFLVAHDPSSPVVVLIQHCKLKKYQG 214
Score = 31.6 bits (70), Expect(3) = 7e-06
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 348 K*TDIIGNVVSMQSAQSKEIGGRNIRFINITLEDLE 241
K D+IG V + K++ GR + +++TL+D E
Sbjct: 136 KVVDVIGQAVERDELKEKDVNGRRSKIMDLTLQDFE 171
Score = 25.4 bits (54), Expect(3) = 7e-06
Identities = 13/68 (19%), Positives = 26/68 (38%)
Frame = -3
Query: 641 QEGRVYAIREFIVANFTDKYKTAAGKYKILFYGKTNVFEMFDKSFPKFMYVLRDFREVAR 462
+EG Y +V KY+ +K+ KT F+ + P + F E+
Sbjct: 71 EEGSTYDNENVLVTKNDPKYQVTQHSFKLNLIDKTKFFKFDATTIPLNHFDFMPFNEILE 130
Query: 461 VENVDETM 438
+ ++ +
Sbjct: 131 AKREEKVV 138