BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00007810
         (669 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    79   1e-12
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    79   1e-12
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    71   3e-10
ref|XP_002875829.1| predicted protein [Arabidopsis lyrata subsp....    69   1e-09
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    69   2e-09
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    67   4e-09
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    67   4e-09
emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]    67   4e-09
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    67   4e-09
emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]    67   5e-09
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    67   5e-09
gb|EMT02085.1| Serine/threonine-protein kinase SMG1 [Aegilops ta...    67   6e-09
emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]    67   6e-09
emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]    67   6e-09
ref|XP_006404270.1| hypothetical protein EUTSA_v10011157mg, part...    66   8e-09
gb|ABD64948.1| hypothetical protein 24.t00034 [Brassica oleracea]      66   8e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   1e-08
emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]    66   1e-08
emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]    66   1e-08
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]    66   1e-08

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/109 (34%), Positives = 60/109 (55%)
 Frame = -1

Query: 666  KDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDASFANWW 487
            +D L  RGI+ D  C  C +E ET++HILF C + + VW I  +S       ++ + N  
Sbjct: 1069 EDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMS 1128

Query: 486  YHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEGKRTTTNNIVDFA 340
              I  T++ D       ++ ++LW+LW+ RN  +FEGK + T  +VD A
Sbjct: 1129 RLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKA 1177


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 35/114 (30%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
 Frame = -1

Query: 669  TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLL-QDASFAN 493
            T   L  R I  + +C  CG+EEE+++H+LF C  ++ +W ++PI   E +  +++ F N
Sbjct: 949  TNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYN 1008

Query: 492  WWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEGKRTTTNNIVDFAVAD 331
            + + +S  K+ D  ++ +++  ++LW++W++RN  IFE    +   I+DFA+ +
Sbjct: 1009 FDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQE 1062


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
 Frame = -1

Query: 663  DNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQ---DASFAN 493
            D L  RG++LD  CQTCG E E++ H+LF C   + VW ++ I    PLL     + +AN
Sbjct: 919  DLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQVWAMSNI--HVPLLGFECGSVYAN 976

Query: 492  WWYHISATKKRDFWQERLQLT-SYLLWWLWRTRNLCIFEGKRTT 364
              YH    +    W   L+ +  +++W +W+ RNL  FEGKR T
Sbjct: 977  -LYHFLINRDNLKWPVELRRSFPWIIWRIWKNRNLFFFEGKRFT 1019


>ref|XP_002875829.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321667|gb|EFH52088.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -1

Query: 663 DNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDASFANWWY 484
           D L  RG++LD  CQ CG + E+++H+LF C + + +W ++     E      +  + ++
Sbjct: 121 DQLRHRGMKLDGRCQVCGKDGESINHVLFECSVARKIWAMSHYPSPENGFDKGAVFSNFH 180

Query: 483 HISATKKRDFWQERLQLT-SYLLWWLWRTRNLCIFEGK 373
           H+   +    W   ++ +  ++LW +W+ +NL  FEGK
Sbjct: 181 HLLVNRDNKSWPINIRKSFPWILWRIWKNKNLLFFEGK 218


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = -1

Query: 657  LLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDAS-FANWWYH 481
            +++RG+ +DP CQ CG E E+++H+LF C + + VW ++ +   +   Q++S FAN  Y 
Sbjct: 1075 IIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYL 1134

Query: 480  ISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
            +    K    ++  +   ++LW LW+ R+   FEG
Sbjct: 1135 LELKGKGLIPEQIKKSWPWVLWRLWKNRDKLFFEG 1169


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
 Frame = -1

Query: 669 TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
           T+DN++KRGI L   C  CG   ET++H+  HC+ T+ +W+I      ISW  P     +
Sbjct: 314 TQDNVMKRGITLCSRCFLCGETLETVNHLFLHCKYTRQLWRIFLSLKGISWTMPRRVTEA 373

Query: 501 FANWWYHISATKKRDFWQERLQLTSYLLWW-LWRTRNLCIFEGKRTTTNNI 352
             +W    +  K R  W    ++    +WW +W+ RN   FEG   +  ++
Sbjct: 374 LYSWEEAGALAKDRTRW----RIIPASIWWAIWKERNSRCFEGIENSVQDV 420


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
 Frame = -1

Query: 669 TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
           T+DN++KRGI L   C  CG   ET++H+  HC+ T+ +W+I      ISW  P     +
Sbjct: 420 TQDNVMKRGITLCSRCFLCGETLETVNHLFLHCKYTRQLWRIFLSLKGISWTMPRRVTEA 479

Query: 501 FANWWYHISATKKRDFWQERLQLTSYLLWW-LWRTRNLCIFEGKRTTTNNI 352
             +W    +  K R  W    ++    +WW +W+ RN   FEG   +  ++
Sbjct: 480 LYSWEEAGALAKDRTRW----RIIPASIWWAIWKERNSRCFEGIENSVQDV 526


>emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]
          Length = 563

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669 TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
           T D L +RG  L   C  CG EEET++HIL HC + K +W I      + W  P      
Sbjct: 424 TLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWNIILALCGVQWVFPNSVKEV 483

Query: 501 FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
            ++W       K+++ W+    +  ++ W +W+ RN   F+G
Sbjct: 484 LSSWKGSFVGRKRKEVWK---SIPLFIFWTIWKERNRLAFKG 522


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1094

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 33/112 (29%), Positives = 57/112 (50%)
 Frame = -1

Query: 666  KDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDASFANWW 487
            +D L  RG+ ++  C  C  + ETL+HILF C + + VW + P+        D+ F N  
Sbjct: 799  EDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPMQSPNHGFGDSIFTNVN 858

Query: 486  YHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEGKRTTTNNIVDFAVAD 331
            + I      +       ++ +++W LW+ RN  +FEG  + + +IV  A+ D
Sbjct: 859  HVIGNCHNTELSPHLRYVSPWIIWILWKNRNKRLFEGIGSVSLSIVGKALED 910


>emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]
          Length = 464

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669 TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
           T D L +RG  L   C  CG EEET++HIL HC + K +W I      + W  P   +  
Sbjct: 325 TLDRLQRRGWHLLNRCFLCGCEEETINHILIHCTVAKGLWNIILALCGVQWVFPNSVEEV 384

Query: 501 FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
            ++W       K+++ W+    +  ++ W +W+ RN   F+G
Sbjct: 385 LSSWKGSFVGRKRKEVWK---AIPLFIFWTIWKERNRLAFKG 423


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = -1

Query: 663  DNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDAS-FANWW 487
            D +++RG+ +DP CQ CG E E+ +H+LF C + + VW ++ +   E   Q+AS FAN  
Sbjct: 847  DQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGVPTPEFGFQNASIFANIQ 906

Query: 486  YHISATKKRDFWQERLQLT-SYLLWWLWRTRNLCIFEG 376
            + +   KK     + ++ +  ++LW LW+ RN   F+G
Sbjct: 907  F-LFELKKMILVPDLVKRSWPWVLWRLWKNRNKLFFDG 943


>gb|EMT02085.1| Serine/threonine-protein kinase SMG1 [Aegilops tauschii]
          Length = 4546

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
 Frame = -1

Query: 669  TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISW---DEPLLQ-DAS 502
            T + L +RG+Q  P C  CG E ET+ H++  C  T+  W    +SW     P  + D S
Sbjct: 4408 TAERLARRGLQHHPRCLLCGQEPETIGHLMLTCPFTRQTWH-EVLSWLRLPAPAPEHDGS 4466

Query: 501  FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEGKRTTTNNIVD 346
              +WW            +    +   + W +W+ RN C+F+  R + N +VD
Sbjct: 4467 LMDWWLRAKELTLPALRKALKSVALLVPWMVWKHRNACVFDHMRPSLNELVD 4518


>emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]
          Length = 1383

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669  TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
            T D L +RG  L   C  CG EEET++HIL HC + K +W I      + W  P      
Sbjct: 901  TLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTMAKGLWNIILALCGVQWVFPNSVKEV 960

Query: 501  FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
             ++W       K+++ W+    +  ++ W +W+ RN   F+G
Sbjct: 961  LSSWKGSFVGRKRKEVWK---SIPLFIFWTIWKERNRLXFKG 999


>emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669  TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
            T D L +RG  L   C  CG EEET++HIL HC + K +W I      + W  P      
Sbjct: 1761 TLDRLQRRGXHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVFPNSVKEV 1820

Query: 501  FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
             ++W       K++  W+    +  ++ W +W+ RN   F+G
Sbjct: 1821 LSSWKGSFVGRKRKKVWK---SIPLFIFWTIWKERNRLAFKG 1859


>ref|XP_006404270.1| hypothetical protein EUTSA_v10011157mg, partial [Eutrema
           salsugineum] gi|557105389|gb|ESQ45723.1| hypothetical
           protein EUTSA_v10011157mg, partial [Eutrema salsugineum]
          Length = 259

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = -1

Query: 660 NLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDASFANWWYH 481
           NL  R +  DP C  CG  E T DH+LFHC+  + VW  AP S    + QD  F   W  
Sbjct: 18  NLASRILGTDPSCHRCGQPEST-DHLLFHCDFARTVWHTAPFSPPISIHQDQQFHYLWKD 76

Query: 480 ISATK-KRDFWQERLQLTSYLLWWLWRTRNLCIFEGKRTTTNNIVDFAVAD 331
           +  T         +  L  ++ W LW+ RN  IF  K  +    ++ ++AD
Sbjct: 77  VKDTSCSPPLDLPKGLLAPWICWNLWKARNNSIFSDKSFSEVETLNKSIAD 127


>gb|ABD64948.1| hypothetical protein 24.t00034 [Brassica oleracea]
          Length = 199

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = -1

Query: 642 IQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDAS-FANWWYHISATK 466
           ++ D +CQTCG + E+++H+LF C   + VW  +          D S F N  Y I   K
Sbjct: 1   MKCDKVCQTCGKDGESINHVLFDCTFARKVWACSGFPHPNQGFHDLSLFVNLNYLILTWK 60

Query: 465 KRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
           +     +  +   ++LW+LWR RNL IFEG
Sbjct: 61  RMSGMIDITRCFPWILWYLWRNRNLLIFEG 90


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 33/108 (30%), Positives = 54/108 (50%)
 Frame = -1

Query: 660  NLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKIAPISWDEPLLQDASFANWWYH 481
            N+ KRG+ +D  C  CG +EET +H+++ C+ +   W I+P+      ++  SF  W   
Sbjct: 1080 NMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVES 1139

Query: 480  ISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEGKRTTTNNIVDFAV 337
            +  T K   W     L   + W +W  RN  +FE K+     +V+ AV
Sbjct: 1140 LLDTHKDTEW---WALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAV 1184


>emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]
          Length = 1232

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669  TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
            T D L  RG+QL   C  CG EEE + HIL HC +T+ +W+I      + W  P     +
Sbjct: 954  TLDRLQLRGVQLPNCCYLCGCEEENVHHILLHCIVTRALWEIIFGLIDVKWVHPETVKEA 1013

Query: 501  FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
              +W       K++  W+    +   + W +W+ RN   F G
Sbjct: 1014 LISWRGSFVGKKRKRIWK---SIPLCIFWTVWKERNRLAFRG 1052


>emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]
          Length = 403

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669 TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
           T D L +RG  L   C  CG EEET++HIL HC + K +W I      + W  P      
Sbjct: 264 TLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVLPNSVKEV 323

Query: 501 FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
            ++W       K++  W+    +  ++ W +W+ RN   F+G
Sbjct: 324 LSSWKGSFVGRKRKKVWK---SIPLFIFWTIWKERNRLAFKG 362


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = -1

Query: 669  TKDNLLKRGIQLDPLCQTCGSEEETLDHILFHCEITKNVWKI----APISWDEPLLQDAS 502
            T D L +RG  L   C  CG EEET++HIL HC + K +W I      + W  P      
Sbjct: 1689 TLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVFPNSVKEV 1748

Query: 501  FANWWYHISATKKRDFWQERLQLTSYLLWWLWRTRNLCIFEG 376
             ++W       K++  W+    +  ++ W +W+ RN   F+G
Sbjct: 1749 LSSWKGSFVGRKRKKVWK---SIPLFIFWTIWKERNRLAFKG 1787