BLASTX nr result

ID: Rehmannia24_contig00007762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00007762
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07

>ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 1035

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = -3

Query: 263 RHFIKHFTDKTK--PLLSHSLAAQKPRMRXXXXXXXXXXXXSTTI-INPYQ-FYTSLFCT 96
           RHFIK    +TK  PLLS +++ Q   +R             T I  +P +  +TS FCT
Sbjct: 5   RHFIKQLIGRTKSLPLLSVAISLQ---LRICLPFSSSATPTGTPIQTHPKKSLHTSFFCT 61

Query: 95  LIHLFLRCRRLSRAIAAFSAMRDCKFTPEL 6
           L+HLFLRC RLSRA   FS+MR+    P+L
Sbjct: 62  LVHLFLRCHRLSRATETFSSMRNYNLVPDL 91


>ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Solanum lycopersicum]
          Length = 1035

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
 Frame = -3

Query: 275 LKPKRHFIKHFTDKTK--PLLSHSLAAQKPRMRXXXXXXXXXXXXSTTIINPYQ--FYTS 108
           +  +RHFIK    +TK  PLLS +++     +R             T I    +   YTS
Sbjct: 1   MNSQRHFIKQLIGRTKSLPLLSVAISLD---LRICLPFSSSATPTGTPIQTHRKKSLYTS 57

Query: 107 LFCTLIHLFLRCRRLSRAIAAFSAMRDCKFTPEL 6
            FCTLIHLFLRC RLSRA   FS+MR+    P++
Sbjct: 58  FFCTLIHLFLRCHRLSRATETFSSMRNYNLVPDI 91


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