BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00007682
         (1227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   391   e-106
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   385   e-104
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   365   2e-98
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              321   3e-85
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   321   3e-85
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   313   9e-83
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   305   2e-80
gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma ca...   305   2e-80
gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma ca...   305   2e-80
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...   305   2e-80
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   302   2e-79
ref|XP_002308050.1| predicted protein [Populus trichocarpa]           302   2e-79
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus...   301   3e-79
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   301   4e-79
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   301   5e-79
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe...   298   4e-78
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   2e-77
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...   295   3e-77
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   295   3e-77
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   294   4e-77

>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/336 (58%), Positives = 253/336 (75%), Gaps = 2/336 (0%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDE 181
            ++ +DL SD QKRKQQ TDEM                +E  ++     D +++ +  ++ 
Sbjct: 1346 ERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNGDEEENG 1405

Query: 182  EAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIR-RGISMEVKGLSFE 358
            +  + E      + +E +S  K+S  K + T ++ +  +  SKK   R + ++V+GL FE
Sbjct: 1406 DRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSDRCVFVDVEGLHFE 1465

Query: 359  VDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDA 538
            V FRF  EPH+LLAQ+AQKTAKKVY+K SGKI QC+MV+Y+  E TV+WD+    N+   
Sbjct: 1466 VHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMWDE----NQTKQ 1521

Query: 539  EKQD-DTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVK 715
            ++QD D++YWA+KA+GVDF +FWEM DDLD++R+Y+NNI AMLNTYGVEAARA+I+REVK
Sbjct: 1522 QRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVK 1581

Query: 716  QVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAA 895
             VF IYGV+IDFRHLSLIAD+MTHTGGY+PMSRHGSISESLSPFLKMSFETASKFIVEAA
Sbjct: 1582 TVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAA 1641

Query: 896  THGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
             HGLTDNLETPSSRICLGLPVKMGTGCF++MQ+LD+
Sbjct: 1642 AHGLTDNLETPSSRICLGLPVKMGTGCFDIMQELDI 1677


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  385 bits (989), Expect = e-104
 Identities = 201/344 (58%), Positives = 252/344 (73%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDE 181
            ++ +DL SD QKRKQQ TDEM                 ED +  ++D     + +NG +E
Sbjct: 1344 ERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTD-----EIDNGDEE 1398

Query: 182  EAEHSEDNDGAS---NADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRG-------IS 331
            E  +  + +  S   + ++ +S  KSS  K +  +      K++ KK RR        + 
Sbjct: 1399 EIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTKTT----VKQNKKKERRSKKDSDRCVF 1454

Query: 332  MEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDD 511
            ++V+GL FEV FRF  EPH+LLAQ+AQKTAKKVYIK SGKI QC+MV+Y+  E TV+WD+
Sbjct: 1455 VDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDE 1514

Query: 512  KKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAAR 691
             +   +    +  D++YWA+KA+GVDF +FWEM DDLD++R+Y+NNI AMLNTYGVEAAR
Sbjct: 1515 YQTKQQS---QDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAAR 1571

Query: 692  ATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETA 871
            A+I+REVK VF IYGV+IDFRHLSLIAD+MTHTGGY+PMSRHGSISESLSPFLKMSFETA
Sbjct: 1572 ASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETA 1631

Query: 872  SKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            SKFIVEAA HGLTDNLETPSSRICLGLPVKMGTGCF++MQKLD+
Sbjct: 1632 SKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1675


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  365 bits (937), Expect = 2e-98
 Identities = 195/339 (57%), Positives = 245/339 (72%), Gaps = 10/339 (2%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDE 181
            D  +DL SDVQKR+QQA D+M                 ED +K  ++ D  +D     ++
Sbjct: 1291 DAGEDLDSDVQKRRQQARDDMDYEDASDSEQREE---EEDLDKANAEEDDDDDENEWNEK 1347

Query: 182  EAEHSEDNDGASNADEVMSEAKSSGRK---GRATSERIEMPKEDS--KKIRRGISMEVKG 346
              +  +D D  S+   ++ +    GRK      TSE+I++    S  K+  R I ME++G
Sbjct: 1348 CDDDHDDYDQRSSEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGKRENRAIYMEIEG 1407

Query: 347  LSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSG-KISQCKMVQYDPDEKTVIWDD---K 514
            LS EV F+FT+EPH+LLAQ+ QKTAKKVY+K++G K++QCK+VQYDPDEKTVIWDD   K
Sbjct: 1408 LSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYDPDEKTVIWDDDKKK 1467

Query: 515  KKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARA 694
            +K  +   +  DD +YWAVKASG D +SFWEM D LDL+RLY NNI++ML TYGVEAA A
Sbjct: 1468 EKATKNGRKADDDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNNIHSMLKTYGVEAASA 1527

Query: 695  TIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETAS 874
            TIIRE+K VFDIYGVKID+RHLSLI D+M H GGYRPMSRHGSI +S+SPFLKMSFETAS
Sbjct: 1528 TIIREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIPDSVSPFLKMSFETAS 1587

Query: 875  KFIVEAATHGLTDNLETPSSRICLGLPVKMGT-GCFELM 988
            KFIVEAA +GL D+LE+PSSRICLGLPV++GT G F+LM
Sbjct: 1588 KFIVEAAIYGLRDDLESPSSRICLGLPVRVGTGGPFDLM 1626


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  321 bits (823), Expect = 3e-85
 Identities = 177/346 (51%), Positives = 234/346 (67%), Gaps = 14/346 (4%)
 Frame = +2

Query: 8    ADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLE-DTENGKDEE 184
            A+DLG D QKRKQQA+DEM                    + G S+G+  E +   G  EE
Sbjct: 1346 AEDLGLDAQKRKQQASDEM--------------------DYGDSEGEPDEGEPSAGLTEE 1385

Query: 185  AEHSEDNDGASNADEV------------MSEAKSS-GRKGRATSERIEMPKEDSKKIRRG 325
             +  ED    SN +EV             S++KSS  +K +  ++R +  +   K   R 
Sbjct: 1386 IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRA 1445

Query: 326  ISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIW 505
            I ++ KG  FEV FRFT EPH+LLAQIAQK A KVYI+ SGKI  C+++  + D+     
Sbjct: 1446 ILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYG 1505

Query: 506  DDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEA 685
             D KK  R +   ++     A++ +GVDF +FW+M D+LD+  +YSNN++AMLNT+GVEA
Sbjct: 1506 RDPKK--RENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEA 1563

Query: 686  ARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFE 865
            ARATII+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYRPM+RHG I+ES+SPF KM+FE
Sbjct: 1564 ARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFE 1623

Query: 866  TASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            TASKFIVEAA+HG+TDNLE+ S+RICLGLPVKMGTGCF+LMQK+++
Sbjct: 1624 TASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1669


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  321 bits (823), Expect = 3e-85
 Identities = 177/346 (51%), Positives = 234/346 (67%), Gaps = 14/346 (4%)
 Frame = +2

Query: 8    ADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLE-DTENGKDEE 184
            A+DLG D QKRKQQA+DEM                    + G S+G+  E +   G  EE
Sbjct: 1417 AEDLGLDAQKRKQQASDEM--------------------DYGDSEGEPDEGEPSAGLTEE 1456

Query: 185  AEHSEDNDGASNADEV------------MSEAKSS-GRKGRATSERIEMPKEDSKKIRRG 325
             +  ED    SN +EV             S++KSS  +K +  ++R +  +   K   R 
Sbjct: 1457 IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRA 1516

Query: 326  ISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIW 505
            I ++ KG  FEV FRFT EPH+LLAQIAQK A KVYI+ SGKI  C+++  + D+     
Sbjct: 1517 ILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYG 1576

Query: 506  DDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEA 685
             D KK  R +   ++     A++ +GVDF +FW+M D+LD+  +YSNN++AMLNT+GVEA
Sbjct: 1577 RDPKK--RENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEA 1634

Query: 686  ARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFE 865
            ARATII+EV  VF+ YGVK++ RHLSLIAD+MTH+GGYRPM+RHG I+ES+SPF KM+FE
Sbjct: 1635 ARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFE 1694

Query: 866  TASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            TASKFIVEAA+HG+TDNLE+ S+RICLGLPVKMGTGCF+LMQK+++
Sbjct: 1695 TASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1740


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  313 bits (802), Expect = 9e-83
 Identities = 175/344 (50%), Positives = 220/344 (63%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSD----GDHLEDTEN 169
            ++ADDLG D QKRK QATDEM                + + E G       GD+  +  N
Sbjct: 1345 ERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEIDQGDNETEISN 1404

Query: 170  GKDEEAEHSED----NDGASNADEVMSEAKSSGRKGRATSERIEMPKED--SKKIRRGIS 331
                + E SE           + +  +E+ S G K +   ++ +  ++   SK   R I 
Sbjct: 1405 DVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIF 1464

Query: 332  MEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDD 511
            +E + + FEV F+FT EPH+LLA+IAQKTAKKVYI+  GKI QC++   D  E  VI+  
Sbjct: 1465 VEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVT--DCKESQVIYYG 1522

Query: 512  KKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAAR 691
            K    R D +        A+ A+GVDF +FW+M D LD+  +YSNNI+AML TYGVEAAR
Sbjct: 1523 KDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAAR 1582

Query: 692  ATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETA 871
             TIIRE+  VF  YG+ +  RHLSLIAD+MTHTGGYRPMSR G I+ES+SPF KMSFETA
Sbjct: 1583 ETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETA 1642

Query: 872  SKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            SKFIVEAA HG  DNLETPS+RICLGLPVKMGTG F+LMQKL++
Sbjct: 1643 SKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLEI 1686


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  305 bits (782), Expect = 2e-80
 Identities = 168/337 (49%), Positives = 218/337 (64%), Gaps = 6/337 (1%)
 Frame = +2

Query: 11   DDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDG-EKGKSDGD---HLEDTENGKD 178
            +DLGSD QKRK Q TDE+                 EDG E+   DG+    +E  E+G D
Sbjct: 1332 EDLGSDAQKRKLQGTDEVDY---------------EDGPEEETHDGELSEEIEGDEDGSD 1376

Query: 179  EEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKED--SKKIRRGISMEVKGLS 352
             +A  + +N   +N  E + +   S       + + E  K +  +KK  R I +E KG  
Sbjct: 1377 VDANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKH 1436

Query: 353  FEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRG 532
            FE+ FRFT EPH+LL QIAQ+TAKKV I+  GK+ +CK +     E  VI+  K    R 
Sbjct: 1437 FEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCK--ESGVIYYGKDGRKRI 1494

Query: 533  DAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREV 712
            +    +     A++ SGV FK+FWE+ DDLD+  +YSNN++AMLN YGVEAAR TIIREV
Sbjct: 1495 EISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREV 1554

Query: 713  KQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEA 892
            + VF  YG+ ++ RHL+LIAD+MTHTG YRPM+R GSI++S SPF+KM FETA  FIVEA
Sbjct: 1555 QNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEA 1614

Query: 893  ATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            A HG  DNLETPS+RICLGLPVKMGTGC +L+QKL++
Sbjct: 1615 AYHGQVDNLETPSARICLGLPVKMGTGCHDLIQKLEI 1651


>gb|EOY09358.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  305 bits (782), Expect = 2e-80
 Identities = 171/344 (49%), Positives = 228/344 (66%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSE-DGEKGKSDGD------HLED 160
            ++A+DLG D QK+KQQ TDEM               L+  + E   S+ +      ++  
Sbjct: 1067 ERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIG 1126

Query: 161  TENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRGISMEV 340
            ++NGKDE ++ S + +  SN     S  + +G + +    + +  +++S    R I   +
Sbjct: 1127 SDNGKDEISQSSPNLENRSNPK---SREEKTGSEPKRKKMKAKFVRKESD---RAIFNAI 1180

Query: 341  KGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIW---DD 511
            +GL FEV F+   EPH+LLAQIA+KTAKKVYI+  GKI QC++   D  E  V +   D 
Sbjct: 1181 RGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVT--DCSENQVFYYGEDP 1238

Query: 512  KKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAAR 691
            KK+ +  D EK       A+  +GVDF +FW+M D +D+  LYSN+I+AMLNTYGVEAAR
Sbjct: 1239 KKRKSPSDKEKIQ-----ALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAAR 1293

Query: 692  ATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETA 871
             TIIRE+  VF  YG+ ++ RHL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETA
Sbjct: 1294 ETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETA 1353

Query: 872  SKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            SKFIVEAA HGL DNLETPSSRICLGLPVKMGTG F+LMQK+++
Sbjct: 1354 SKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVEI 1397


>gb|EOY09357.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  305 bits (782), Expect = 2e-80
 Identities = 171/344 (49%), Positives = 228/344 (66%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSE-DGEKGKSDGD------HLED 160
            ++A+DLG D QK+KQQ TDEM               L+  + E   S+ +      ++  
Sbjct: 1070 ERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIG 1129

Query: 161  TENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRGISMEV 340
            ++NGKDE ++ S + +  SN     S  + +G + +    + +  +++S    R I   +
Sbjct: 1130 SDNGKDEISQSSPNLENRSNPK---SREEKTGSEPKRKKMKAKFVRKESD---RAIFNAI 1183

Query: 341  KGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIW---DD 511
            +GL FEV F+   EPH+LLAQIA+KTAKKVYI+  GKI QC++   D  E  V +   D 
Sbjct: 1184 RGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVT--DCSENQVFYYGEDP 1241

Query: 512  KKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAAR 691
            KK+ +  D EK       A+  +GVDF +FW+M D +D+  LYSN+I+AMLNTYGVEAAR
Sbjct: 1242 KKRKSPSDKEKIQ-----ALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAAR 1296

Query: 692  ATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETA 871
             TIIRE+  VF  YG+ ++ RHL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETA
Sbjct: 1297 ETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETA 1356

Query: 872  SKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            SKFIVEAA HGL DNLETPSSRICLGLPVKMGTG F+LMQK+++
Sbjct: 1357 SKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVEI 1400


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  305 bits (782), Expect = 2e-80
 Identities = 171/344 (49%), Positives = 228/344 (66%), Gaps = 10/344 (2%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSE-DGEKGKSDGD------HLED 160
            ++A+DLG D QK+KQQ TDEM               L+  + E   S+ +      ++  
Sbjct: 1359 ERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEIDMSEDETGTIQINMIG 1418

Query: 161  TENGKDEEAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRGISMEV 340
            ++NGKDE ++ S + +  SN     S  + +G + +    + +  +++S    R I   +
Sbjct: 1419 SDNGKDEISQSSPNLENRSNPK---SREEKTGSEPKRKKMKAKFVRKESD---RAIFNAI 1472

Query: 341  KGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIW---DD 511
            +GL FEV F+   EPH+LLAQIA+KTAKKVYI+  GKI QC++   D  E  V +   D 
Sbjct: 1473 RGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVT--DCSENQVFYYGEDP 1530

Query: 512  KKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAAR 691
            KK+ +  D EK       A+  +GVDF +FW+M D +D+  LYSN+I+AMLNTYGVEAAR
Sbjct: 1531 KKRKSPSDKEKIQ-----ALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAAR 1585

Query: 692  ATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETA 871
             TIIRE+  VF  YG+ ++ RHL+LIAD+MTH+G YRPMSR G I+ES+SPF KMSFETA
Sbjct: 1586 ETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETA 1645

Query: 872  SKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            SKFIVEAA HGL DNLETPSSRICLGLPVKMGTG F+LMQK+++
Sbjct: 1646 SKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVEI 1689


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  302 bits (774), Expect = 2e-79
 Identities = 175/372 (47%), Positives = 224/372 (60%), Gaps = 38/372 (10%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLE----DTEN 169
            ++ADDLG DVQKRKQQ TDEM                 +DG +G  + D  +       +
Sbjct: 778  EEADDLGLDVQKRKQQVTDEMDY---------------DDGSEGVLNEDEGDLSGSQAPS 822

Query: 170  GKDEEAEHSEDNDGASNADEVMSEAK--------------SSGRKGRATSERIEM----- 292
            G + + E ++     SN D V  +++               S +K   +S ++EM     
Sbjct: 823  GSESDTEPADKESEISNTDMVDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLK 882

Query: 293  ------PKEDSKKIR---------RGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKK 427
                   K   KK+R         R I +E KGL FE+  +FT EPH+LLA+IAQKTAKK
Sbjct: 883  STEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKK 942

Query: 428  VYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWE 607
            V I+  GK+ +C++   D  E  VI+  K    R D E  +     A+   GVDF +FW+
Sbjct: 943  VCIQNPGKVQRCQVT--DCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWK 1000

Query: 608  MHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTH 787
            M D LD+  +YSN+I+ ML  YGVEAAR TIIRE+K VF+ YG+ ++ RHLSLIADYMTH
Sbjct: 1001 MQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTH 1060

Query: 788  TGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMG 967
            TG YRPMSR G ISES+SP  KMSFETASKFIVEAA HG  DNLE PS+R+CLGLPVKMG
Sbjct: 1061 TGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMG 1120

Query: 968  TGCFELMQKLDV 1003
            TG F+LMQKL++
Sbjct: 1121 TGSFDLMQKLEI 1132


>ref|XP_002308050.1| predicted protein [Populus trichocarpa]
          Length = 464

 Score =  302 bits (774), Expect = 2e-79
 Identities = 175/372 (47%), Positives = 224/372 (60%), Gaps = 38/372 (10%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLE----DTEN 169
            ++ADDLG DVQKRKQQ TDEM                 +DG +G  + D  +       +
Sbjct: 110  EEADDLGLDVQKRKQQVTDEMDY---------------DDGSEGVLNEDEGDLSGSQAPS 154

Query: 170  GKDEEAEHSEDNDGASNADEVMSEAK--------------SSGRKGRATSERIEM----- 292
            G + + E ++     SN D V  +++               S +K   +S ++EM     
Sbjct: 155  GSESDTEPADKESEISNTDMVDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLK 214

Query: 293  ------PKEDSKKIR---------RGISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKK 427
                   K   KK+R         R I +E KGL FE+  +FT EPH+LLA+IAQKTAKK
Sbjct: 215  STEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKK 274

Query: 428  VYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWE 607
            V I+  GK+ +C++   D  E  VI+  K    R D E  +     A+   GVDF +FW+
Sbjct: 275  VCIQNPGKVQRCQVT--DCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWK 332

Query: 608  MHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTH 787
            M D LD+  +YSN+I+ ML  YGVEAAR TIIRE+K VF+ YG+ ++ RHLSLIADYMTH
Sbjct: 333  MQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTH 392

Query: 788  TGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMG 967
            TG YRPMSR G ISES+SP  KMSFETASKFIVEAA HG  DNLE PS+R+CLGLPVKMG
Sbjct: 393  TGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMG 452

Query: 968  TGCFELMQKLDV 1003
            TG F+LMQKL++
Sbjct: 453  TGSFDLMQKLEI 464


>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  301 bits (772), Expect = 3e-79
 Identities = 162/332 (48%), Positives = 220/332 (66%), Gaps = 1/332 (0%)
 Frame = +2

Query: 11   DDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDG-EKGKSDGDHLEDTENGKDEEA 187
            +DLGSD QKRK+Q TDE+                 EDG E+   DG   E+ EN +D   
Sbjct: 1324 EDLGSDAQKRKRQGTDEVDY---------------EDGPEEETHDGVLSEEIENDEDNVD 1368

Query: 188  EHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRGISMEVKGLSFEVDF 367
            ++   +   S   + +SE+KS   K     E+ +  +  ++K  R + ++ KG+ F++ F
Sbjct: 1369 DNMTLDASDSEGLDELSESKSIFEKDSLKREK-KKSRPTTRKYDRAVFVKAKGMHFQIHF 1427

Query: 368  RFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNRGDAEKQ 547
            +FT EP +LLA+IA ++AKKV I+ SG++ +CK V           +D +K  R D    
Sbjct: 1428 KFTGEPDILLAEIALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRK--RDDIPAS 1485

Query: 548  DDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIREVKQVFD 727
                  A++ SGV FK+FWE+ DDLD+  +YSNN++AMLN YGVEAAR TIIREV+ VF 
Sbjct: 1486 VKEKIPALQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFK 1545

Query: 728  IYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAATHGL 907
             YG+ ++ RHL+LIAD+MTH+GGYRPM+R+GSI++  SPF+KM FETASKFIVEAA HG 
Sbjct: 1546 SYGISVNIRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQ 1605

Query: 908  TDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
             DNLETPSSRICLGLPVKMGTGC +L+QKL++
Sbjct: 1606 VDNLETPSSRICLGLPVKMGTGCHDLIQKLEI 1637


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  301 bits (771), Expect = 4e-79
 Identities = 168/338 (49%), Positives = 219/338 (64%), Gaps = 4/338 (1%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDE 181
            D A+DLGSD++K+K QA DEM                S   E     GD  E T N   E
Sbjct: 1321 DVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKES-STGFESEVDQGDEAEITNNDMIE 1379

Query: 182  EAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIR----RGISMEVKGL 349
              + S     + N  E++  +KS  ++ + T    E  K  S+ +R    R I +E K  
Sbjct: 1380 IVKDS----ASENQPEIVDVSKSMSKE-KTTETSKEKKKVKSELVRKETDRSIFVEAKEN 1434

Query: 350  SFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNR 529
             FEV F+FT EPH LL+QI Q+ A+KV I+RSGKI QC+ +     E  VI+       R
Sbjct: 1435 HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCK--EGQVIYHGNNLKER 1492

Query: 530  GDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIRE 709
             + + ++     A++ SGVDFK+ WEM D+LD+  +YSN+I+AML TYGVEAARATIIRE
Sbjct: 1493 KNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIRE 1552

Query: 710  VKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 889
            ++ +F  YG+ ++ RHLSL+ADYMTH+GGYRPMSR G IS+S+SPF +M+FETA KFIV+
Sbjct: 1553 IQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQ 1612

Query: 890  AATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            AA HG  DNLETPSSRICLGLPVKMGTG F+LMQK++V
Sbjct: 1613 AALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1650


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  301 bits (770), Expect = 5e-79
 Identities = 168/338 (49%), Positives = 218/338 (64%), Gaps = 4/338 (1%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDE 181
            D A+DLGSD +K+K QA DEM                S   E     GD  E T N   E
Sbjct: 1323 DVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKES-STGFESEVDQGDEAEITNNDMIE 1381

Query: 182  EAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIR----RGISMEVKGL 349
              + S     + N  E++  +KS  ++ + T    E  K  S+ +R    R I +E K  
Sbjct: 1382 IVKDS----ASENQPEIVDVSKSMSKE-KTTETSKEKKKVKSELVRKETDRSIFVEAKEN 1436

Query: 350  SFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKPNR 529
             FEV F+FT EPH LL+QI Q+ A+KV I+RSGKI QC+ +     E  VI+       R
Sbjct: 1437 HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCK--EGQVIYHGNNLKER 1494

Query: 530  GDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATIIRE 709
             + + ++     A++ SGVDFK+ WEM D+LD+  +YSN+I+AML TYGVEAARATIIRE
Sbjct: 1495 KNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATIIRE 1554

Query: 710  VKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVE 889
            ++ +F  YG+ ++ RHLSL+ADYMTH+GGYRPMSR G IS+S+SPF +M+FETA KFIV+
Sbjct: 1555 IQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQ 1614

Query: 890  AATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            AA HG  DNLETPSSRICLGLPVKMGTG F+LMQK++V
Sbjct: 1615 AALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1652


>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  298 bits (762), Expect = 4e-78
 Identities = 171/351 (48%), Positives = 222/351 (63%), Gaps = 18/351 (5%)
 Frame = +2

Query: 11   DDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLE------DTENG 172
            +D G D  KRK QATDEM                 E  E   SDGD  E      + E G
Sbjct: 1273 EDFGLDAHKRKLQATDEMDYEDGCD---------DEVREADLSDGDESEIDEEENEVEIG 1323

Query: 173  KDEEAEHSEDNDG--ASNADEV--MSEAKSSGRKGRATSE-------RIEMPKEDSKKIR 319
            KD E    + ND    S  +E   +++ KS  +K ++ S+       R EM K+++    
Sbjct: 1324 KDGEIGVIDANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRAEMVKKETD--- 1380

Query: 320  RGISMEVKGLSFEVDFRFT-TEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKT 496
            R I +  KG  FEV FRF   EPH+LL+QIAQKTA+KVYI+RSGK++ CK +  D  E  
Sbjct: 1381 RAIFVSAKGFHFEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQITCD--ENQ 1438

Query: 497  VIWDDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYG 676
            V+   K   N+     ++     A++ +G+DF +FW++ D LD+  +YSNNI+AMLNTYG
Sbjct: 1439 VLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHAMLNTYG 1498

Query: 677  VEAARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKM 856
            VEAAR TIIRE+  VF  YG+ ++ RHL+LIAD+MTH GGYRP++R G I ES+SPF KM
Sbjct: 1499 VEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESISPFNKM 1558

Query: 857  SFETASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV*C 1009
            +FETASKFIVEAA HG  D LETPS+RICLGLPV +GTGCF+LM K++V C
Sbjct: 1559 TFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKMEVEC 1609


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  296 bits (757), Expect = 2e-77
 Identities = 165/346 (47%), Positives = 221/346 (63%), Gaps = 12/346 (3%)
 Frame = +2

Query: 2    DKADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENG-KD 178
            ++A+DLG D  K+KQ+ATDE                   DG      G  ++  E+   D
Sbjct: 1379 EEAEDLGMDAHKQKQRATDEKDYEDGSEEEM-------NDGVSAAGFGSEIDQAESEIDD 1431

Query: 179  EEAEHSEDNDGASNADEVMSEA----------KSSGRKGRATSERIEMPKEDSKK-IRRG 325
            ++AE   ++D A+N  E   +           KSS +K ++ S+R +   +  KK   R 
Sbjct: 1432 DQAETEIEDDRATNEIETSQDQASENLKPFTPKSSKKKSKSKSKRKKARAKLVKKDTDRA 1491

Query: 326  ISMEVKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIW 505
            I +  +G+ FE  F+F  EP++LLAQIA+  AKKVYI+ SGKI QC++      E  VI+
Sbjct: 1492 IYVAARGMHFEAHFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCK--ESQVIY 1549

Query: 506  DDKKKPNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEA 685
              K    R D + ++     A+  +GVDF +FW + D +D+  +YSNNI AML TYGVEA
Sbjct: 1550 YGKDPKTREDIKPEEKEKVQALHTTGVDFHAFWRLQDFIDVRYIYSNNIQAMLETYGVEA 1609

Query: 686  ARATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFE 865
            AR TIIRE+K VF  YG+ ++ RHLSLIAD+MTH+GGYRPMSR G I+ES+SPF KM+FE
Sbjct: 1610 ARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFE 1669

Query: 866  TASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            TASKFIVEAA++G  D L+TPS+RICLGLPVKMGTG F+LMQKL+V
Sbjct: 1670 TASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLMQKLEV 1715


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score =  295 bits (755), Expect = 3e-77
 Identities = 166/341 (48%), Positives = 220/341 (64%), Gaps = 10/341 (2%)
 Frame = +2

Query: 11   DDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDEEAE 190
            +DLG D  K+K+QATDEM                +  G + + D D  ++ E  KD E E
Sbjct: 1440 EDLGLDAVKQKRQATDEMDYDDDYDERVNEEA--TRAGSESEDDNDE-DEVEFRKDNEVE 1496

Query: 191  -------HSEDN---DGASNADEVMSEAKSSGRKGRATSERIEMPKEDSKKIRRGISMEV 340
                   H E     +G S ++ + ++ KS   KG+    R    K+D     R I +E 
Sbjct: 1497 MLDAKGGHLESPSKAEGFSTSESLKTKTKSRA-KGKKKIRRQFNRKDDD----RSIFVEA 1551

Query: 341  KGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKK 520
            KG  F+V FRF+ E H+LLAQIAQ TA +VYI+ SGK+  C+ +     E  VI+  K  
Sbjct: 1552 KGFYFKVHFRFSNEAHILLAQIAQNTATRVYIQSSGKVDNCQQITCK--ENQVIYYGKDP 1609

Query: 521  PNRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATI 700
             +R D   ++  +  A++ SGVDF +FW++ D LD+  +YSN+I+AMLNTYGVEAAR TI
Sbjct: 1610 KSRDDIPLEEKENIPALQTSGVDFMTFWKLQDILDVRYIYSNDIHAMLNTYGVEAARETI 1669

Query: 701  IREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKF 880
            IRE+  VF  YG+ ++ RHL+LIAD+MTHTGGYR MSRHG I++S+SPF KM FETASKF
Sbjct: 1670 IREITNVFKSYGISVNIRHLTLIADFMTHTGGYRSMSRHGGIADSISPFSKMCFETASKF 1729

Query: 881  IVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            IVEAA H   D+LETPS+RICLGLPVK+GTGCF+LMQKL++
Sbjct: 1730 IVEAAYHREMDDLETPSARICLGLPVKVGTGCFDLMQKLEI 1770


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  295 bits (754), Expect = 3e-77
 Identities = 156/345 (45%), Positives = 220/345 (63%), Gaps = 14/345 (4%)
 Frame = +2

Query: 11   DDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSEDGEKGKSDGDHLEDTENGKDEEAE 190
            +D G D QK+K+Q TDEM                 ++  +G+   +   + +NG+ +   
Sbjct: 1339 EDFGLDAQKQKRQGTDEMEYDDDW----------EDEFNEGRQSDEFENEIDNGELDVEI 1388

Query: 191  HSEDNDGASNADEVMSEAKSSG------RKGRATSERIEMPKEDSKKI-----RRGISME 337
              +   G S+A++ M E+ S+G       KG+ T  R ++ K+ S K+      R   + 
Sbjct: 1389 DKDGVTGISDANDKMQESCSTGGISKPHSKGKKTKSRDKIKKKTSAKLVRKEYDRATFVS 1448

Query: 338  VKGLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVI--WDD 511
             KG  FE+ F+FT EPH+LL QIAQKTA+ VY+K SG I  C+ +    +E  V   W+D
Sbjct: 1449 AKGFHFEIHFKFTNEPHILLDQIAQKTARNVYVKSSGNILDCQDIDIYGNEDQVFCCWND 1508

Query: 512  KKKPNRGDAE-KQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAA 688
             +    G+    +++    A++ +GVDF + W++ DDLD++ +YSNNI+AMLNTYGVEAA
Sbjct: 1509 PRNKLSGEKNPSEEEKKMRALQTAGVDFATLWKLQDDLDVNYIYSNNIHAMLNTYGVEAA 1568

Query: 689  RATIIREVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFET 868
            R TII+E+  VF +YG+ ++ RHL LIADYMT +G YRPM+R G I+ES SP  KMSFET
Sbjct: 1569 RETIIKEISNVFKVYGISVNIRHLLLIADYMTRSGSYRPMNRFGGIAESTSPMNKMSFET 1628

Query: 869  ASKFIVEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLDV 1003
            ASKFI EAA HG  D+LETPS+RICLGLPVK+GTGCF+LM K+++
Sbjct: 1629 ASKFIQEAAYHGEKDDLETPSARICLGLPVKVGTGCFDLMHKMEI 1673


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  294 bits (753), Expect = 4e-77
 Identities = 161/339 (47%), Positives = 218/339 (64%), Gaps = 8/339 (2%)
 Frame = +2

Query: 8    ADDLGSDVQKRKQQATDEMXXXXXXXXXXXXXXXLSED--GEKGKSDGDHLEDTENGKDE 181
            A+DLG D QK K+Q  D++               LSED  G +   D ++++D  +GKD+
Sbjct: 1320 AEDLGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEYVKDDGDGKDD 1379

Query: 182  EAEHSEDNDGASNADEVMSEAKSSGRKGRATSERIEMPKEDSK------KIRRGISMEVK 343
            E       DG  + D    E   + +K    +   + P+E+SK      K  R + ++ +
Sbjct: 1380 E-------DGKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVSKKFDRRVYVKFE 1432

Query: 344  GLSFEVDFRFTTEPHLLLAQIAQKTAKKVYIKRSGKISQCKMVQYDPDEKTVIWDDKKKP 523
               FE+ F+FT EPH+LLAQIAQKTA+KV I+  GK+ QCK +     E  VI+  +   
Sbjct: 1433 KRHFEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKVGQCKAITCK--ESGVIYYGEDDS 1490

Query: 524  NRGDAEKQDDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNINAMLNTYGVEAARATII 703
             R +          A++ SG+ FKSFWEM DDL++  +YSNN++A+L+TYGVEAA+ TII
Sbjct: 1491 KREEIPSSVKEKIPALQTSGIHFKSFWEMQDDLNVRYVYSNNVHAILSTYGVEAAKETII 1550

Query: 704  REVKQVFDIYGVKIDFRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFI 883
            REV+ VF  YG+ ++ RHL LIAD+MTH+G YRPMSR GSI++S SPFLK+ FETAS FI
Sbjct: 1551 REVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPMSRKGSIADSTSPFLKICFETASNFI 1610

Query: 884  VEAATHGLTDNLETPSSRICLGLPVKMGTGCFELMQKLD 1000
            VEAA HG  DNL++PS+RICLGLPVKMGTGC EL+QKL+
Sbjct: 1611 VEAACHGQVDNLDSPSARICLGLPVKMGTGCHELIQKLE 1649