BLASTX nr result
ID: Rehmannia24_contig00007423
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00007423
(365 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233133.1| PREDICTED: 40S ribosomal protein S4-like [So... 92 9e-17
ref|XP_004240421.1| PREDICTED: 40S ribosomal protein S4-like [So... 91 1e-16
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1 [Glyci... 91 1e-16
gb|ACU24626.1| unknown [Glycine max] 91 1e-16
ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycin... 91 1e-16
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22... 91 1e-16
ref|XP_002329710.1| predicted protein [Populus trichocarpa] gi|5... 91 2e-16
ref|NP_001275148.1| 40S ribosomal protein S4 [Solanum tuberosum]... 90 3e-16
ref|XP_006344073.1| PREDICTED: 40S ribosomal protein S4-like [So... 90 3e-16
gb|ESW28125.1| hypothetical protein PHAVU_003G261200g [Phaseolus... 90 3e-16
gb|ESW28124.1| hypothetical protein PHAVU_003G261200g [Phaseolus... 90 3e-16
gb|EOX95119.1| Ribosomal protein S4 (RPS4A) family protein [Theo... 90 3e-16
ref|XP_004233135.1| PREDICTED: 40S ribosomal protein S4-like iso... 90 3e-16
ref|XP_004233134.1| PREDICTED: 40S ribosomal protein S4-like iso... 90 3e-16
ref|NP_001275093.1| 40S ribosomal protein S4-like [Solanum tuber... 90 3e-16
gb|EOY07098.1| Ribosomal protein S4 (RPS4A) family protein [Theo... 90 4e-16
ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1 [Glyci... 90 4e-16
gb|ACU24295.1| unknown [Glycine max] 90 4e-16
ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cu... 89 6e-16
ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cu... 89 6e-16
>ref|XP_004233133.1| PREDICTED: 40S ribosomal protein S4-like [Solanum lycopersicum]
Length = 264
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATRLGNVFT+GKG+KPWVSLPKGKGIKLSIIEEARKR+AAQSATA
Sbjct: 217 EFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMAAQSATA 263
>ref|XP_004240421.1| PREDICTED: 40S ribosomal protein S4-like [Solanum lycopersicum]
Length = 264
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIEEARKRLAAQSAT
Sbjct: 217 EFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEARKRLAAQSAT 262
>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1 [Glycine max]
Length = 264
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATR+GNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKR+AAQ ATA
Sbjct: 217 EFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATA 263
>gb|ACU24626.1| unknown [Glycine max]
Length = 264
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATR+GNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKR+AAQ ATA
Sbjct: 217 EFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATA 263
>ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycine max]
gi|255645121|gb|ACU23059.1| unknown [Glycine max]
Length = 264
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATR+GNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKR+AAQ ATA
Sbjct: 217 EFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATA 263
>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
40S ribosomal S4 protein [Glycine max]
gi|255641970|gb|ACU21252.1| unknown [Glycine max]
Length = 264
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATR+GNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKR+AAQ ATA
Sbjct: 217 EFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQATA 263
>ref|XP_002329710.1| predicted protein [Populus trichocarpa]
gi|566205907|ref|XP_006374217.1| 40S ribosomal protein
S4 [Populus trichocarpa] gi|550321974|gb|ERP52014.1| 40S
ribosomal protein S4 [Populus trichocarpa]
Length = 263
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATRLGNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKRLAA ATA
Sbjct: 217 EFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRLAASQATA 263
>ref|NP_001275148.1| 40S ribosomal protein S4 [Solanum tuberosum]
gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S
ribosomal protein S4 gi|457803|emb|CAA54095.1| ribosomal
protein S4 [Solanum tuberosum]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIE+ARKRLAAQSAT
Sbjct: 217 EFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKRLAAQSAT 262
>ref|XP_006344073.1| PREDICTED: 40S ribosomal protein S4-like [Solanum tuberosum]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIEEARK+LAAQSAT
Sbjct: 217 EFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEARKKLAAQSAT 262
>gb|ESW28125.1| hypothetical protein PHAVU_003G261200g [Phaseolus vulgaris]
Length = 199
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR++AQ +TA
Sbjct: 152 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRISAQQSTA 198
>gb|ESW28124.1| hypothetical protein PHAVU_003G261200g [Phaseolus vulgaris]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 143
EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR++AQ +TA
Sbjct: 217 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRISAQQSTA 263
>gb|EOX95119.1| Ribosomal protein S4 (RPS4A) family protein [Theobroma cacao]
Length = 262
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSA 137
EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQ+A
Sbjct: 217 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQAA 261
>ref|XP_004233135.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Solanum
lycopersicum]
Length = 246
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATRLGNVFT+GKG+KPWVSLPKGKGIKLSIIEEARKR+AAQSAT
Sbjct: 199 EFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMAAQSAT 244
>ref|XP_004233134.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Solanum
lycopersicum] gi|460374676|ref|XP_004233136.1|
PREDICTED: 40S ribosomal protein S4-like [Solanum
lycopersicum] gi|460374678|ref|XP_004233137.1|
PREDICTED: 40S ribosomal protein S4-like isoform 1
[Solanum lycopersicum] gi|460374680|ref|XP_004233138.1|
PREDICTED: 40S ribosomal protein S4-like isoform 2
[Solanum lycopersicum]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATRLGNVFT+GKG+KPWVSLPKGKGIKLSIIEEARKR+AAQSAT
Sbjct: 217 EFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMAAQSAT 262
>ref|NP_001275093.1| 40S ribosomal protein S4-like [Solanum tuberosum]
gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like
protein [Solanum tuberosum]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIEEA+KRLAAQSAT
Sbjct: 217 EFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEAKKRLAAQSAT 262
>gb|EOY07098.1| Ribosomal protein S4 (RPS4A) family protein [Theobroma cacao]
Length = 262
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSA 137
EFATRLGNVFTIGKGTKPWVSLPKGKGIKLS+IEEARKRLAAQ+A
Sbjct: 217 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSVIEEARKRLAAQNA 261
>ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1 [Glycine max]
Length = 264
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATR+GNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKR+AAQ AT
Sbjct: 217 EFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQAT 262
>gb|ACU24295.1| unknown [Glycine max]
Length = 264
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 140
EFATR+GNVFTIGKGTKPW+SLPKGKGIKLSIIEEARKR+AAQ AT
Sbjct: 217 EFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQAT 262
>ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 264
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSA 137
EFATRLGNVFTIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+QSA
Sbjct: 217 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSA 261
>ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
Length = 216
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 3 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSA 137
EFATRLGNVFTIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+QSA
Sbjct: 169 EFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSA 213