BLASTX nr result
ID: Rehmannia24_contig00007239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00007239
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-a... 65 1e-11
gb|EOY27665.1| Small nuclear ribonucleoprotein family protein is... 73 5e-11
gb|EOY27664.1| Small nuclear ribonucleoprotein family protein is... 73 5e-11
emb|CBI20780.3| unnamed protein product [Vitis vinifera] 72 1e-10
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262... 72 1e-10
ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-a... 63 1e-10
gb|EXB54844.1| hypothetical protein L484_005333 [Morus notabilis] 65 6e-10
ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus tri... 64 2e-09
gb|EPS70464.1| hypothetical protein M569_04303, partial [Genlise... 61 2e-09
ref|XP_004486013.1| PREDICTED: uncharacterized protein LOC101510... 67 2e-09
ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated p... 67 2e-09
ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792... 67 3e-09
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm... 67 3e-09
ref|XP_006468032.1| PREDICTED: uncharacterized protein LOC102616... 66 4e-09
gb|EMJ15183.1| hypothetical protein PRUPE_ppa013581mg [Prunus pe... 62 7e-09
gb|AFK39204.1| unknown [Lotus japonicus] 65 1e-08
gb|ESW19916.1| hypothetical protein PHAVU_006G166200g [Phaseolus... 63 2e-08
ref|XP_006414113.1| hypothetical protein EUTSA_v10026609mg [Eutr... 63 4e-08
ref|XP_006285662.1| hypothetical protein CARUB_v10007117mg [Caps... 63 4e-08
ref|NP_680719.1| Small nuclear ribonucleoprotein family protein ... 63 4e-08
>ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like isoform 1 [Solanum lycopersicum]
gi|460398877|ref|XP_004244973.1| PREDICTED: small
nuclear ribonucleoprotein-associated protein N-like
isoform 2 [Solanum lycopersicum]
Length = 118
Score = 65.1 bits (157), Expect(2) = 1e-11
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR +PS ME RV+ LILIP SCR CHVDC
Sbjct: 60 NIILQDAVEYRSTRRSAPSPMEQRVLGLILIPSSCRKTCHVDC 102
Score = 30.0 bits (66), Expect(2) = 1e-11
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +1
Query: 16 AEVSSNHSFHVSAPKTSKFVAYSKKMVHHRMLIGI 120
++V S++ F ++ SK+V++ KK+++ RML+GI
Sbjct: 11 SDVGSSNQFETNS---SKYVSHVKKLLYRRMLVGI 42
>gb|EOY27665.1| Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma
cacao]
Length = 140
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD++E+RSTRH SPS ME R + LILIPFSCRT CHVDC
Sbjct: 87 NIILQDSIEYRSTRHSSPSPMEQRCLGLILIPFSCRTSCHVDC 129
>gb|EOY27664.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 123
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD++E+RSTRH SPS ME R + LILIPFSCRT CHVDC
Sbjct: 59 NIILQDSIEYRSTRHSSPSPMEQRCLGLILIPFSCRTSCHVDC 101
>emb|CBI20780.3| unnamed protein product [Vitis vinifera]
Length = 78
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RSTR SPS ME R + LILIPFSCRT CHVDC
Sbjct: 23 NIILQDTVEYRSTRRSSPSPMEQRCLGLILIPFSCRTSCHVDC 65
>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
Length = 116
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RSTR SPS ME R + LILIPFSCRT CHVDC
Sbjct: 61 NIILQDTVEYRSTRRSSPSPMEQRCLGLILIPFSCRTSCHVDC 103
>ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like [Solanum tuberosum]
Length = 118
Score = 62.8 bits (151), Expect(2) = 1e-10
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR +PS ME RV+ LILIP CR CHVDC
Sbjct: 60 NIILQDAVEYRSTRRSAPSPMEQRVLGLILIPSLCRKTCHVDC 102
Score = 28.5 bits (62), Expect(2) = 1e-10
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 16 AEVSSNHSFHVSAPKTSKFVAYSKKMVHHRMLIGI 120
+EV S++ + SK+V++ KK+++ RML+GI
Sbjct: 11 SEVGSSNQLETN---NSKYVSHVKKLLYRRMLVGI 42
>gb|EXB54844.1| hypothetical protein L484_005333 [Morus notabilis]
Length = 104
Score = 65.1 bits (157), Expect(2) = 6e-10
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR SPS ME R + LILIP SCR+ CHVDC
Sbjct: 51 NIILQDAVEYRSTRRSSPSPMEQRCLGLILIPSSCRSSCHVDC 93
Score = 24.3 bits (51), Expect(2) = 6e-10
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 13 QAEVSSNHSFHVSAPKTSKFVAYSKKMVHHRMLIGI 120
QAE SS+ + S+ ++ K+VH RML+GI
Sbjct: 4 QAEKSSSEG------EKSEALSRVSKLVHRRMLVGI 33
>ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222869442|gb|EEF06573.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 109
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+R+T SPS ME R + LILIP SCRT CHVDC
Sbjct: 55 NIILQDAVEYRNTHRSSPSPMEQRCLGLILIPSSCRTSCHVDC 97
Score = 24.3 bits (51), Expect(2) = 2e-09
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 10 QQAEVSSNHSFHVSAPKTSKFVAYSKKMVHHRMLIGI 120
++ E+SS S + +S V+ ++K++ RML+GI
Sbjct: 3 EEMEISS--STQATESSSSDIVSRARKLLFRRMLVGI 37
>gb|EPS70464.1| hypothetical protein M569_04303, partial [Genlisea aurea]
Length = 101
Score = 61.2 bits (147), Expect(2) = 2e-09
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RS R SPS ME R V LILIP +CR CHVDC
Sbjct: 44 NIILQDAVEYRSMRRTSPSPMEQRGVGLILIPSTCRISCHVDC 86
Score = 26.6 bits (57), Expect(2) = 2e-09
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 49 SAPKTSKFVAYSKKMVHHRMLIGI 120
S +S ++ +KK++H +MLIGI
Sbjct: 3 SQGSSSHYIGEAKKLIHRQMLIGI 26
>ref|XP_004486013.1| PREDICTED: uncharacterized protein LOC101510833 isoform X1 [Cicer
arietinum] gi|502078653|ref|XP_004486014.1| PREDICTED:
uncharacterized protein LOC101510833 isoform X2 [Cicer
arietinum]
Length = 111
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RSTR SPS ME R + LILIP CRT CHVDC
Sbjct: 57 NIILQDTVEYRSTRRSSPSPMEQRCIGLILIPSPCRTSCHVDC 99
>ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula] gi|357447245|ref|XP_003593898.1| Small
nuclear ribonucleoprotein-associated protein B [Medicago
truncatula] gi|355482944|gb|AES64147.1| Small nuclear
ribonucleoprotein-associated protein B [Medicago
truncatula] gi|355482946|gb|AES64149.1| Small nuclear
ribonucleoprotein-associated protein B [Medicago
truncatula] gi|388515765|gb|AFK45944.1| unknown
[Medicago truncatula]
Length = 113
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RSTR SPS ME R + LILIP SCR CHVDC
Sbjct: 57 NIILQDTVEYRSTRRSSPSPMEQRCIGLILIPSSCRMSCHVDC 99
>ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792908 [Glycine max]
Length = 107
Score = 66.6 bits (161), Expect(2) = 3e-09
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR SPS ME R + LILIP SCRT CHVDC
Sbjct: 48 NIILQDAVEYRSTRQSSPSPMEQRCLGLILIPSSCRTSCHVDC 90
Score = 20.4 bits (41), Expect(2) = 3e-09
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 61 TSKFVAYSKKMVHHRMLIGI 120
+S V+ ++K++ RML+GI
Sbjct: 11 SSGTVSRARKLLFRRMLVGI 30
>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
gi|223541066|gb|EEF42622.1| conserved hypothetical
protein [Ricinus communis]
Length = 118
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR SPS ME R + LILIP SCRT CHVDC
Sbjct: 63 NIILQDAVEYRSTRRTSPSPMEQRCLGLILIPASCRTTCHVDC 105
>ref|XP_006468032.1| PREDICTED: uncharacterized protein LOC102616346 [Citrus sinensis]
Length = 114
Score = 65.9 bits (159), Expect(2) = 4e-09
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR SPS ME R + +ILIP SCRT CHVDC
Sbjct: 59 NIILQDAVEYRSTRRTSPSPMEQRCLGIILIPSSCRTSCHVDC 101
Score = 20.4 bits (41), Expect(2) = 4e-09
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 49 SAPKTSKFVAYSKKMVHHRMLIGI 120
S K S ++ +K++ RML+GI
Sbjct: 18 SDTKGSNHISRVRKLLCRRMLVGI 41
>gb|EMJ15183.1| hypothetical protein PRUPE_ppa013581mg [Prunus persica]
Length = 115
Score = 62.0 bits (149), Expect(2) = 7e-09
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR SPS ME R + LILIP SCR CHV C
Sbjct: 62 NIILQDAVEYRSTRRSSPSPMEQRFLGLILIPSSCRVSCHVGC 104
Score = 23.5 bits (49), Expect(2) = 7e-09
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 19 EVSSNHSFHVSAPKTSKFVAYSKKMVHHRMLIGI 120
+ +S+ + P S+ V ++K++ RML+GI
Sbjct: 11 QAASSDGSNPKGPDESEAVNRARKLLFRRMLVGI 44
>gb|AFK39204.1| unknown [Lotus japonicus]
Length = 111
Score = 64.7 bits (156), Expect(2) = 1e-08
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQD VE+RSTR SPS ME R + LILIP SCR CHVDC
Sbjct: 55 NIILQDAVEYRSTRRSSPSPMEQRCLGLILIPSSCRATCHVDC 97
Score = 20.4 bits (41), Expect(2) = 1e-08
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 46 VSAPKTSKFVAYSKKMVHHRMLIGI 120
V +S V+ +K++ RML+GI
Sbjct: 13 VGTSDSSSRVSRVRKLLFRRMLVGI 37
>gb|ESW19916.1| hypothetical protein PHAVU_006G166200g [Phaseolus vulgaris]
gi|561021146|gb|ESW19917.1| hypothetical protein
PHAVU_006G166200g [Phaseolus vulgaris]
Length = 116
Score = 63.2 bits (152), Expect(2) = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVD 242
NIILQD VE+RSTR SPS ME R + LILIP SCRT CHVD
Sbjct: 57 NIILQDAVEYRSTRQSSPSPMEQRCLGLILIPSSCRTSCHVD 98
Score = 21.2 bits (43), Expect(2) = 2e-08
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 55 PKTSKFVAYSKKMVHHRMLIGI 120
P S V+ ++K++ RML+GI
Sbjct: 18 PGGSGTVSRARKLLFRRMLVGI 39
>ref|XP_006414113.1| hypothetical protein EUTSA_v10026609mg [Eutrema salsugineum]
gi|557115283|gb|ESQ55566.1| hypothetical protein
EUTSA_v10026609mg [Eutrema salsugineum]
Length = 112
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RS R SPS E R + +ILIP SCRT CHVDC
Sbjct: 57 NIILQDTVEYRSIRRSSPSPTEQRCLGMILIPSSCRTSCHVDC 99
>ref|XP_006285662.1| hypothetical protein CARUB_v10007117mg [Capsella rubella]
gi|482554367|gb|EOA18560.1| hypothetical protein
CARUB_v10007117mg [Capsella rubella]
Length = 109
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RS R SPS E R + +ILIP SCRT CHVDC
Sbjct: 54 NIILQDTVEYRSIRRSSPSPTEQRCLGMILIPSSCRTSCHVDC 96
>ref|NP_680719.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] gi|332658634|gb|AEE84034.1| Small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
Length = 112
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +3
Query: 117 NIILQDTVEHRSTRHYSPSLMEHRVVDLILIPFSCRTFCHVDC 245
NIILQDTVE+RS R SPS E R + +ILIP SCRT CHVDC
Sbjct: 57 NIILQDTVEYRSIRRSSPSPTEQRCLGMILIPSSCRTSCHVDC 99