BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00006886
         (1661 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   723   0.0  
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   717   0.0  
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   692   0.0  
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   689   0.0  
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof...   689   0.0  
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   681   0.0  
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   675   0.0  
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   665   0.0  
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...   665   0.0  
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   649   0.0  
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise...   645   0.0  
gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]     625   e-176
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   613   e-173
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   611   e-172
gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus...   611   e-172
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   606   e-171
ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containi...   606   e-170
gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protei...   549   e-153
ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Caps...   548   e-153
ref|NP_177628.2| pentatricopeptide repeat-containing protein [Ar...   545   e-152

>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like isoform X1 [Solanum tuberosum]
            gi|565356286|ref|XP_006344999.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565356288|ref|XP_006345000.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  723 bits (1867), Expect = 0.0
 Identities = 345/450 (76%), Positives = 401/450 (89%), Gaps = 1/450 (0%)
 Frame = +1

Query: 220  IANLILKGDNPESLTQALHSLPEWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYRHSA 399
            I+NLIL+  +PESL+  LH+L +WTP LVQ +LKRLWNHGPKAL FFNLL+ H SY HSA
Sbjct: 38   ISNLILQS-SPESLSDTLHTLTQWTPDLVQAVLKRLWNHGPKALHFFNLLDHHRSYTHSA 96

Query: 400  ASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLS 579
             +FDHAIDIAAR+RDYKT W LV +M+S +LGP PKTFAIITERYVSAGKADKA+ +FLS
Sbjct: 97   TAFDHAIDIAARMRDYKTQWKLVARMQSRRLGPNPKTFAIITERYVSAGKADKAVNVFLS 156

Query: 580  MHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLKKQT 759
            MH+HGC QDLNSFNAFLDVLCKSKRAEMA KLFK+FR RFKAD ISYN +ANGFCL K+T
Sbjct: 157  MHKHGCPQDLNSFNAFLDVLCKSKRAEMALKLFKMFRSRFKADTISYNTLANGFCLVKRT 216

Query: 760  PRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSYTTV 939
            P+A E+++EM+ERGL PT+TTYNI+L G+FRAGQIKE WEFFLQMKKRK +IDVV+YTT+
Sbjct: 217  PKAQEILKEMVERGLNPTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTI 276

Query: 940  VHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLRRGY 1119
            VHGFGVAGEVEK++K+F+EMVGAG+LP VATYNALIQV+CKKD VENA+++F+EMLR+GY
Sbjct: 277  VHGFGVAGEVEKAQKLFNEMVGAGILPSVATYNALIQVMCKKDSVENAILIFNEMLRKGY 336

Query: 1120 VPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIEKALE 1296
            +PNATTYN +IRGLCH GKMD A+E+MDKM +D CEP +QT+NVVIRYYCD+GEIEK+L 
Sbjct: 337  LPNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRYYCDEGEIEKSLR 396

Query: 1297 VLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLN 1476
            V E+M+ G CLPNLDTYNILI AMFVRKKSDDLL+AGKLL EMVDRGFLPRKFTFNRVLN
Sbjct: 397  VFERMSTGDCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLN 456

Query: 1477 GLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            GL+LTGNQ FA+EILRL SK G LP  F+L
Sbjct: 457  GLLLTGNQDFAKEILRLVSKSGRLPCHFKL 486


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  717 bits (1850), Expect = 0.0
 Identities = 342/450 (76%), Positives = 400/450 (88%), Gaps = 1/450 (0%)
 Frame = +1

Query: 220  IANLILKGDNPESLTQALHSLPEWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYRHSA 399
            I+ LIL+  +PESL+  LH+L +WTP LVQ++LKRLWNHGPKALQFFNLL+ H SY HS 
Sbjct: 44   ISTLILQS-SPESLSDTLHTLTQWTPDLVQSVLKRLWNHGPKALQFFNLLDHHRSYTHST 102

Query: 400  ASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLS 579
             +FDHAIDIAAR+RDYKT W LV +M+S +LGP PKTFAIITERYVSAGKADKA+ +FLS
Sbjct: 103  IAFDHAIDIAARMRDYKTMWKLVARMQSRRLGPNPKTFAIITERYVSAGKADKAVNVFLS 162

Query: 580  MHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLKKQT 759
            MH+HGC QDL+SFNAFLDVLCKSKRAEMA KLFK+FR RFKAD ISYN +ANGFCL K+T
Sbjct: 163  MHKHGCPQDLSSFNAFLDVLCKSKRAEMALKLFKMFRSRFKADTISYNTLANGFCLVKRT 222

Query: 760  PRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSYTTV 939
            P+A E+++EM+ERGL PT+TTYNI+L G+FRAGQIKE WEFFLQMKKRK +IDVV+YTT+
Sbjct: 223  PKAQEILKEMVERGLNPTITTYNIMLNGFFRAGQIKEAWEFFLQMKKRKCDIDVVTYTTL 282

Query: 940  VHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLRRGY 1119
            VHGFGVAGEVEK++K+F+EMVGAG+LP +ATYNALIQV+CKKD  ENA++VF+EMLR+GY
Sbjct: 283  VHGFGVAGEVEKAQKLFNEMVGAGILPSIATYNALIQVMCKKDSTENAILVFNEMLRKGY 342

Query: 1120 VPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIEKALE 1296
            +PNATTYN +IRGLCH GKMD A+E+MDKM +D CEP +QT+NVVIRYYCD+GEIEK+L 
Sbjct: 343  LPNATTYNAIIRGLCHVGKMDNAMEYMDKMNEDGCEPNVQTYNVVIRYYCDEGEIEKSLR 402

Query: 1297 VLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLN 1476
            V E+M+ G CLPNLDTYNILI AMFVRKKSDDLL+AGKLL EMVDRGFLPRKFTFNRVLN
Sbjct: 403  VFERMSTGHCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLN 462

Query: 1477 GLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            GL+LTGNQ FA+EILRL SK G LP  F+L
Sbjct: 463  GLLLTGNQDFAKEILRLVSKSGRLPCHFKL 492


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
            gi|557541992|gb|ESR52970.1| hypothetical protein
            CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  692 bits (1785), Expect = 0.0
 Identities = 326/453 (71%), Positives = 391/453 (86%), Gaps = 2/453 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            A +A+LIL   +P +LTQ LH     WTP LV  I+KRLWNH  KAL FFN+L  HP+Y 
Sbjct: 41   AALASLILTSTDPRTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYA 100

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            HS +SFDHAID+AARLRDY+T W LV +M+S +LGPT KTFAII ERYVSAGKAD+A+KI
Sbjct: 101  HSRSSFDHAIDLAARLRDYRTVWILVHRMKSLRLGPTQKTFAIIAERYVSAGKADRAVKI 160

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FLSMHEHGC+Q LNSFN  LD+LCK K+ E AY LFK+FRG+FKADVISYN+IANG+CL 
Sbjct: 161  FLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLV 220

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+T +ALEV++EM++RGL P LTTYNI+LKGYFRAGQI+E W FFL+MKKRK EIDVV+Y
Sbjct: 221  KRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTY 280

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TT+VHGFG+ GE++++R VFD MV  GVLP VATYNA+IQVLCKKD VENA++VF+EM+R
Sbjct: 281  TTIVHGFGIVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVR 340

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIEK 1287
            +GY+PN+TTYNVVIRGLCHAG+M+ A+EF+ +MKDD CEP +QT+N++IRY+CD GEIE+
Sbjct: 341  KGYMPNSTTYNVVIRGLCHAGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIER 400

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
             LE+ EKM  G CLPNLDTYNILI +MFVRKKSDDLL+AGKLLIEMVDRGF+PRKFTFNR
Sbjct: 401  GLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNR 460

Query: 1468 VLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            VLNGL+L GNQG A+EILRLQS+CG LPRQF+L
Sbjct: 461  VLNGLLLIGNQGLAKEILRLQSRCGRLPRQFKL 493


>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like isoform X1 [Citrus sinensis]
            gi|568845657|ref|XP_006476684.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  689 bits (1779), Expect = 0.0
 Identities = 326/453 (71%), Positives = 389/453 (85%), Gaps = 2/453 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            A +A+LIL   +P +LTQ LH     WTP LV  I+KRLWNH  KAL FFN+L  HP+Y 
Sbjct: 41   AALASLILTSTDPRTLTQTLHCPSLHWTPQLVDQIIKRLWNHALKALHFFNILSYHPTYA 100

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            HS +SFDHAID+AARLRDY+T WTLV +M+S  LGPT KTFAII ERYVSAGKAD+A+KI
Sbjct: 101  HSPSSFDHAIDLAARLRDYRTVWTLVHRMKSLSLGPTQKTFAIIAERYVSAGKADRAVKI 160

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FLSMHEHGC+Q LNSFN  LD+LCK K+ E AY LFK+FRG+FKADVISYN+IANG+CL 
Sbjct: 161  FLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGKFKADVISYNVIANGWCLV 220

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+T +ALEV++EM++RGL P LTTYNI+LKGYFRAGQI+E W FFL+MKKRK EIDVV+Y
Sbjct: 221  KRTNKALEVLKEMVDRGLNPNLTTYNIVLKGYFRAGQIEEAWRFFLEMKKRKCEIDVVTY 280

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TT+VHGFGV GE++++R VFD MV  GVLP VATYNA+IQVLCKKD VENA++VF+EM+ 
Sbjct: 281  TTIVHGFGVVGEIKRARNVFDGMVNGGVLPSVATYNAMIQVLCKKDSVENAILVFEEMVG 340

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIEK 1287
            +GY+PN+TTYNVVIRGLCH G+M+ A+EF+ +MKDD CEP +QT+N++IRY+CD GEIE+
Sbjct: 341  KGYMPNSTTYNVVIRGLCHTGEMERALEFVGRMKDDECEPNVQTYNILIRYFCDAGEIER 400

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
             LE+ EKM  G CLPNLDTYNILI +MFVRKKSDDLL+AGKLLIEMVDRGF+PRKFTFNR
Sbjct: 401  GLELFEKMGSGVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNR 460

Query: 1468 VLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            VLNGL+L GNQG A+EILRLQS+CG LPRQF+L
Sbjct: 461  VLNGLLLMGNQGLAKEILRLQSRCGRLPRQFKL 493


>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 491

 Score =  689 bits (1778), Expect = 0.0
 Identities = 339/454 (74%), Positives = 393/454 (86%), Gaps = 3/454 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLL-ETHPSY 387
            A +  LIL   NP+SLTQ+L S    WTP LV TILK+LWNHGPKALQFF+LL   HP+Y
Sbjct: 38   AILTGLILTSTNPKSLTQSLLSPSINWTPLLVDTILKQLWNHGPKALQFFHLLLHNHPTY 97

Query: 388  RHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALK 567
             HS +SFDHAIDIAARLR Y T +TL+ +MRS +L PTPKTFAII ERYV+AGK DKALK
Sbjct: 98   IHSVSSFDHAIDIAARLRHYATVFTLLHRMRSLRLHPTPKTFAIIAERYVAAGKPDKALK 157

Query: 568  IFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCL 747
            IFLSMHEHGC QDL+SFN  LDVLCK+KR E A   FK+ RG+FKADVISYNIIANG+CL
Sbjct: 158  IFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACNFFKVLRGKFKADVISYNIIANGWCL 217

Query: 748  KKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVS 927
             K+T  ALE ++EM+E+GL P LTTYNI+LKGYFRAGQI+EGW+FFL+MKKRK EIDVV+
Sbjct: 218  IKRTNMALETLKEMVEKGLTPNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVT 277

Query: 928  YTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEML 1107
            YTTVVHG GVAGE++++RKVFDEMV  GVLP VATYNALIQVLCKKDCVENA++VF+EML
Sbjct: 278  YTTVVHGLGVAGEIKRARKVFDEMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEML 337

Query: 1108 RRGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIE 1284
            R+GYVPN+TTYNVVIRGLCH  +MD AIEFMDKM+DD C P +QT+N+VIRY+CD GEIE
Sbjct: 338  RKGYVPNSTTYNVVIRGLCHKEQMDRAIEFMDKMRDDECGPNVQTYNIVIRYFCDAGEIE 397

Query: 1285 KALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFN 1464
            K LE+ +KM+ G CLPNLDTYNILIGAMFVRKK DDL++AGKLLIEMVDRGF+PR+ TFN
Sbjct: 398  KGLELFQKMSCGDCLPNLDTYNILIGAMFVRKKPDDLVVAGKLLIEMVDRGFMPRRLTFN 457

Query: 1465 RVLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            RVL+GL+LTGNQGFA+ ILRLQS+CG LPRQF+L
Sbjct: 458  RVLDGLLLTGNQGFAKGILRLQSRCGRLPRQFKL 491


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  681 bits (1757), Expect = 0.0
 Identities = 322/453 (71%), Positives = 385/453 (84%), Gaps = 2/453 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            A  A LILK D P+SLT+ LH     WTP  V   LKRLWNHGPKAL FF  L+ HP+Y 
Sbjct: 38   AAFAALILKSD-PQSLTRILHDPNIHWTPDSVNKTLKRLWNHGPKALLFFKTLDRHPTYT 96

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            HS++S+DHA+DIA RLRDYK+ W  V +MR+ ++GP P+TFAII ERYV+AGK D+A+K+
Sbjct: 97   HSSSSYDHAVDIAGRLRDYKSLWAFVARMRALRVGPAPRTFAIIAERYVAAGKPDRAVKV 156

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FLSMHEHGC QDLNSFN  LDVLCK+KR E AY LFK+FRGRF+AD +SYN+I NG+CL 
Sbjct: 157  FLSMHEHGCPQDLNSFNTVLDVLCKAKRVEKAYNLFKVFRGRFRADCVSYNVIVNGWCLI 216

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+TP+ALEV+REM+ERG+EP+L TYNI+LKGY RAGQ+KE WEFF +MK+RK EIDVV+Y
Sbjct: 217  KRTPKALEVLREMVERGIEPSLVTYNIMLKGYLRAGQVKEAWEFFREMKRRKCEIDVVTY 276

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TT+VHGFGV GE++K RK+FD MV  GVLP VATYNALIQVLCKKD VENA+VVF+EM+ 
Sbjct: 277  TTLVHGFGVLGEIKKVRKIFDGMVEEGVLPSVATYNALIQVLCKKDSVENAVVVFEEMVS 336

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMK-DDCEPTIQTFNVVIRYYCDDGEIEK 1287
            +GYVPN TTYNV++RGLCHAG MD  +E M++MK DDCEP +QT+NVVIRY+CDDG+I+K
Sbjct: 337  KGYVPNVTTYNVLVRGLCHAGNMDSGMELMERMKDDDCEPNVQTYNVVIRYFCDDGQIDK 396

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
            AL+V EKM  G CLPNLDTYN+LI AMFVRKK +DLL+AGKLLIEMVDRGFLPRK+TFN+
Sbjct: 397  ALDVFEKMGKGECLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVDRGFLPRKYTFNK 456

Query: 1468 VLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            VL+GL+LTGNQGFA+EILR QS+CG LPRQ RL
Sbjct: 457  VLDGLLLTGNQGFAKEILRSQSRCGRLPRQVRL 489


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Cucumis sativus]
            gi|449487784|ref|XP_004157799.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  675 bits (1741), Expect = 0.0
 Identities = 323/452 (71%), Positives = 394/452 (87%), Gaps = 3/452 (0%)
 Frame = +1

Query: 220  IANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYRHS 396
            IA L+L+ D P+SL  +LH L  ++TP LV  +LKRLW HGPKALQFF  LE HPSY HS
Sbjct: 53   IATLVLESD-PKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHS 111

Query: 397  AASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFL 576
            A+SFDHAIDIA R+RDYKT W LV +MR+ ++GP+ KTFAII ER+V+AGK D+A+K+FL
Sbjct: 112  ASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFL 171

Query: 577  SMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYK-LFKIFRGRFKADVISYNIIANGFCLKK 753
            SM EHGC QDL+SFN  LD+LCKSKR EMAY  LFK+ RG+FKADV+SYNIIANG+CL K
Sbjct: 172  SMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIK 231

Query: 754  QTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSYT 933
            +TP+ALEV++EM+ERGL PT+TTYNILLKGYFRAGQ+KE WEFFLQMK+R++EIDVV+YT
Sbjct: 232  RTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYT 291

Query: 934  TVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLRR 1113
            T+VHGFGV GE++++RKVF+EMVG G+LP  ATYNA+IQVLCKKD VENA+++F+EM+++
Sbjct: 292  TMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKK 351

Query: 1114 GYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMK-DDCEPTIQTFNVVIRYYCDDGEIEKA 1290
            GYVPN TTYNVVIRGL HAG MD A+EF+++MK D CEP +QT+NV IRY+CD G++EK 
Sbjct: 352  GYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKG 411

Query: 1291 LEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRV 1470
            L + EKM  G+ LPNLDTYN+LI AMFVRKKS+DL++AGKLL+EMVDRGF+PRKFTFNRV
Sbjct: 412  LSMFEKMGQGS-LPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRV 470

Query: 1471 LNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            LNGL+LTGNQ FA+EILRLQSKCG LPRQF+L
Sbjct: 471  LNGLLLTGNQAFAKEILRLQSKCGRLPRQFKL 502


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322291|gb|EEF05687.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 491

 Score =  665 bits (1717), Expect = 0.0
 Identities = 315/453 (69%), Positives = 386/453 (85%), Gaps = 2/453 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            A +A LIL   NP++L Q LHS   +WTP LV TILKRLWN GPKALQFFNLL  HPSY 
Sbjct: 39   AALATLILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYS 98

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            H  +S+DHAIDI+ARLRD  +  +LV +MRS++LGPTPKTFAII ERY SAGK  +A+K+
Sbjct: 99   HHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKV 158

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FLSMH+ GC QDL SFN  LDVLCKSKR EMAY LFK+F+G+F+AD +SYN++ NG+CL 
Sbjct: 159  FLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLI 218

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+T +ALE+++EM++RGL P LT+YN +LKGYFRAGQI E W+FFL+MKKR  EIDV++Y
Sbjct: 219  KRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITY 278

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TTV+HGFGVAGE++++RKVFD MV  GVLP VATYNA IQVLCKKD V+NA+V+F+EM+ 
Sbjct: 279  TTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVV 338

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIEK 1287
            +GYVPN+ TYN+VIRGLCH G+M+ A+EFM +M+DD CEP +QT+N+VIRY+CD+GEI+K
Sbjct: 339  KGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMRDDGCEPNVQTYNLVIRYFCDEGEIDK 398

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
            AL++ +KM  G CLPNLDTYNILI AMFVRKKSDDLL+AG LLIEMVDRGF+PRKFTFNR
Sbjct: 399  ALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNR 458

Query: 1468 VLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            VLNGL+LTGNQGFA+EILRLQS+CG L R+ +L
Sbjct: 459  VLNGLLLTGNQGFAKEILRLQSRCGRLTRKIKL 491


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Cicer arietinum]
          Length = 498

 Score =  665 bits (1717), Expect = 0.0
 Identities = 314/453 (69%), Positives = 388/453 (85%), Gaps = 2/453 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            ATIA L+L+ D P SL++ L +L  +WTPHLV  +LKRLWNHGPKALQFF  LE HP+Y 
Sbjct: 47   ATIAKLVLESD-PTSLSETLTNLNFQWTPHLVNNVLKRLWNHGPKALQFFKHLERHPTYI 105

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            HS ++F+HAIDI+ARLRDY T W LV +MR+ +LGPTP+TFAI++ERY + GKA +A+K+
Sbjct: 106  HSTSAFEHAIDISARLRDYNTAWALVDRMRTLRLGPTPRTFAILSERYATGGKAHRAVKV 165

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FLSMHEHGC QDLNSFN  LDVLCK+KR EMA+ LFK F+GRFK D +SYNI+ANG+CL 
Sbjct: 166  FLSMHEHGCNQDLNSFNTILDVLCKTKRVEMAHNLFKTFKGRFKCDSVSYNIMANGWCLM 225

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+TP AL+VM+EM+ERG+ PT+ TYN LLKGYFR+ Q+ E W+FFL+MKKRK EIDVV+Y
Sbjct: 226  KRTPMALQVMKEMVERGITPTMVTYNTLLKGYFRSHQLNEAWDFFLEMKKRKCEIDVVTY 285

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TT+VHGFGVAGEV++S++VFD MV  G++P VATYNALIQVLCKKD V+NAL+VF+EM+ 
Sbjct: 286  TTMVHGFGVAGEVKRSKRVFDAMVKEGLIPSVATYNALIQVLCKKDNVQNALLVFEEMVG 345

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKD-DCEPTIQTFNVVIRYYCDDGEIEK 1287
            +GYVPN TTYNVVIRGLCH+G+M+ A+EFM++M++  C P++QT+NVVIRY+CDDGE+EK
Sbjct: 346  KGYVPNLTTYNVVIRGLCHSGEMEKALEFMERMEEHGCRPSVQTYNVVIRYFCDDGELEK 405

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
               + EKM  GTCLPNLDTYNILI AMFVRKKS+DL++AGKLLIEMV RGFLPRKFTFNR
Sbjct: 406  GFGLFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVVAGKLLIEMVGRGFLPRKFTFNR 465

Query: 1468 VLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            VLNGL+LTGN+ FA EILR+QS+CG + R  +L
Sbjct: 466  VLNGLVLTGNRDFANEILRMQSRCGRILRHVKL 498


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  649 bits (1675), Expect = 0.0
 Identities = 303/452 (67%), Positives = 378/452 (83%), Gaps = 2/452 (0%)
 Frame = +1

Query: 217  TIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYRH 393
            T+A LIL   N ++L ++LHS   +WTP LV TILKRLWNHGPKAL FF +L  HPSY H
Sbjct: 31   TLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPSYCH 90

Query: 394  SAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIF 573
             A+SFDHAIDI ARLRD++T W LV +MRS +LGP+P+TFAII ERY + GK  +A+ +F
Sbjct: 91   QASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVF 150

Query: 574  LSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLKK 753
            +SMHE+GC QDL+SFN  LDVLCKSKR EMAY LFK  +G+FKAD +SYNII NG+CL K
Sbjct: 151  MSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIK 210

Query: 754  QTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSYT 933
            +TP+ALE+++EM+ERGL P LTTYNI+L GYFRAGQ  E W FFL+MKKRK +IDVV+YT
Sbjct: 211  RTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYT 270

Query: 934  TVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLRR 1113
            +V+HG GV GE++++R VF++MV  GVLP VAT+NALIQ+LCKKD VENA+++F+EM++R
Sbjct: 271  SVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR 330

Query: 1114 GYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMK-DDCEPTIQTFNVVIRYYCDDGEIEKA 1290
            GYVPN+ TYN+VIRGLCH G+M  A+E M++M+ DDCEP +QT+N++IRY+CD GEIEK 
Sbjct: 331  GYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKG 390

Query: 1291 LEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRV 1470
            L++ +KM  G CLPNLDTYNILI +MFVRK SD+LL+AGKLL+EMVDRGFLPRK TFNRV
Sbjct: 391  LDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRV 450

Query: 1471 LNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            L+GL+LTGNQ FA+EIL LQ  CG LPR+F+L
Sbjct: 451  LDGLLLTGNQDFAKEILSLQGGCGRLPRKFKL 482


>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
          Length = 451

 Score =  645 bits (1663), Expect = 0.0
 Identities = 312/451 (69%), Positives = 375/451 (83%), Gaps = 2/451 (0%)
 Frame = +1

Query: 220  IANLILKGDNPESLTQALHSLPEWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYRHSA 399
            I +LIL+  N E L   +HS  +WT   VQ +LKRLWNHGPKAL+FF  L+ HP YRHSA
Sbjct: 1    IGDLILQSRNREILIGTVHSRTDWTQARVQDVLKRLWNHGPKALEFFEALDRHPRYRHSA 60

Query: 400  ASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIFLS 579
            A+FD AIDIAARLRDYK  W L+ +MRS KL P+PKTF+I+ ERY SAG+ADKA+ +FL+
Sbjct: 61   AAFDGAIDIAARLRDYKRVWNLIRRMRSRKLKPSPKTFSIVIERYASAGRADKAVNVFLT 120

Query: 580  MHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLKKQT 759
            MH HGC QDL+SFNA LDVLCKSKRAE A+KLF I RGRF+AD I+YNIIA GFCLKKQT
Sbjct: 121  MHRHGCPQDLSSFNAMLDVLCKSKRAEKAHKLFTILRGRFRADAITYNIIAYGFCLKKQT 180

Query: 760  PRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSYTTV 939
             RA+EVM+EM+ERGL PTLTTYNILLKGYF AGQIK+G EFF Q+KKR +E+D VS+TTV
Sbjct: 181  SRAVEVMKEMVERGLIPTLTTYNILLKGYFGAGQIKQGLEFFSQLKKRNVEMDAVSFTTV 240

Query: 940  VHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLRRGY 1119
            VHG GVAGE+EK+RKVF EM  AGVLP VA+YNA+IQ+LCKKD VENA+ VFDEM ++G 
Sbjct: 241  VHGLGVAGEIEKARKVFREMSEAGVLPTVASYNAMIQILCKKDSVENAMKVFDEMQQKGT 300

Query: 1120 VPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD--CEPTIQTFNVVIRYYCDDGEIEKAL 1293
             PNATTYN+VIRGLCH GK DMAIE+MD+MK++  C PT QTFN++IRYYCD+GEIEKA+
Sbjct: 301  KPNATTYNLVIRGLCHVGKFDMAIEYMDRMKENGCCTPTFQTFNIIIRYYCDEGEIEKAM 360

Query: 1294 EVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVL 1473
             V +KM   TCL N DTYN+LI +MF R+KS+DL +AG+LLIEMV RGFLPR+FT NRVL
Sbjct: 361  AVFKKMTCETCLANQDTYNVLISSMFARRKSEDLQVAGELLIEMVGRGFLPRRFTVNRVL 420

Query: 1474 NGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            NGL++TGNQ FA+++LR+ +  G LPR+F+L
Sbjct: 421  NGLLVTGNQTFARQVLRVLTANGLLPRKFKL 451


>gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]
          Length = 521

 Score =  625 bits (1613), Expect = e-176
 Identities = 290/428 (67%), Positives = 366/428 (85%), Gaps = 2/428 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            A+  NL+LK D  E+LT+ L+     WTPHLV  ILK+LWNHGPKALQFF  L+ HP+Y 
Sbjct: 31   ASFTNLVLKSDR-ETLTRTLNDPNLHWTPHLVDRILKKLWNHGPKALQFFKTLDYHPNYA 89

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            H+A+SFD+ IDIA RLRD++T WTLV +MRS ++GP+PKTFAII ERYVSAGK+D+A+K+
Sbjct: 90   HAASSFDNVIDIAGRLRDFQTVWTLVARMRSRRIGPSPKTFAIIAERYVSAGKSDRAIKV 149

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FLSM EHGC QDLNSFN+ LDVLCKS R EMA+  F+ +R  F+ D +SYN+IANG+CL 
Sbjct: 150  FLSMREHGCSQDLNSFNSVLDVLCKSGRVEMAHNFFRAYRRNFRVDTVSYNVIANGWCLI 209

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+TP+ALEV+ +M++RG  P+L TYNI+LKGYFRAGQ+KE WEFF +MK+RK+EIDVV+Y
Sbjct: 210  KKTPKALEVLEDMVKRGFSPSLITYNIMLKGYFRAGQVKEAWEFFGEMKRRKVEIDVVTY 269

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TT+VHGFGV GE++K+R++FDEMVG GV+P VATYNALIQVLCKKD VENA+VVF+EM+ 
Sbjct: 270  TTLVHGFGVVGEIKKARRIFDEMVGEGVVPTVATYNALIQVLCKKDSVENAVVVFEEMVG 329

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMK-DDCEPTIQTFNVVIRYYCDDGEIEK 1287
            +G VPN TTY V++RGLCHAG+M+ ++EF+++MK D CEP +Q +N+VIRY+CDDGEIEK
Sbjct: 330  KGCVPNVTTYTVLVRGLCHAGQMERSMEFVERMKGDGCEPNVQIYNIVIRYFCDDGEIEK 389

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
            AL V EKM  G+CLPNLDTYN+LI AMFVRK+SDDLL+AGKLLIEMVDRGF+P++  FNR
Sbjct: 390  ALSVFEKMGNGSCLPNLDTYNVLITAMFVRKRSDDLLLAGKLLIEMVDRGFIPQRLIFNR 449

Query: 1468 VLNGLMLT 1491
            +L+GL+LT
Sbjct: 450  ILDGLLLT 457


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial; AltName: Full=Protein ORGANELLE TRANSCRIPT
            PROCESSING DEFECT 43; Flags: Precursor
            gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535
            DUF17 domain [Arabidopsis thaliana]
            gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
            protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  613 bits (1581), Expect = e-173
 Identities = 300/458 (65%), Positives = 370/458 (80%), Gaps = 7/458 (1%)
 Frame = +1

Query: 214  ATIANLILKGDNP----ESLTQALHSLPEWTPHLVQTILKRLWNHGPKALQFFNLLETHP 381
            A IA LIL   N     +    +  + P WTP+LV ++LKRLWNHGPKALQFF+ L+ H 
Sbjct: 26   AAIAKLILSSPNTTHQDDQFLLSTKTTP-WTPNLVNSVLKRLWNHGPKALQFFHFLDNHH 84

Query: 382  -SYRHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADK 558
              Y H A+SFD AIDIAARL  + T W+L+ +MRS ++GP+PKTFAI+ ERY SAGK DK
Sbjct: 85   REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDK 144

Query: 559  ALKIFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANG 738
            A+K+FL+MHEHGC QDL SFN  LDVLCKSKR E AY+LF+  RGRF  D ++YN+I NG
Sbjct: 145  AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNG 204

Query: 739  FCLKKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEID 918
            +CL K+TP+ALEV++EM+ERG+ P LTTYN +LKG+FRAGQI+  WEFFL+MKKR  EID
Sbjct: 205  WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264

Query: 919  VVSYTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFD 1098
            VV+YTTVVHGFGVAGE++++R VFDEM+  GVLP VATYNA+IQVLCKKD VENA+V+F+
Sbjct: 265  VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324

Query: 1099 EMLRRGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDG 1275
            EM+RRGY PN TTYNV+IRGL HAG+     E M +M+++ CEP  QT+N++IRYY +  
Sbjct: 325  EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384

Query: 1276 EIEKALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKF 1455
            E+EKAL + EKM  G CLPNLDTYNILI  MFVRK+S+D+++AGKLL+EMV+RGF+PRKF
Sbjct: 385  EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKF 444

Query: 1456 TFNRVLNGLMLTGNQGFAQEILRLQSKCGS-LPRQFRL 1566
            TFNRVLNGL+LTGNQ FA+EILRLQSK GS L R+FRL
Sbjct: 445  TFNRVLNGLLLTGNQAFAKEILRLQSKSGSRLLRKFRL 482


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Glycine max]
          Length = 495

 Score =  611 bits (1576), Expect = e-172
 Identities = 295/455 (64%), Positives = 371/455 (81%), Gaps = 4/455 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETH-PSY 387
            ATIA L+L+ D P ++++AL     +WTP LV  ++KRLWNHGPKALQFF  L+ H PSY
Sbjct: 42   ATIAKLVLESD-PRTVSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSY 100

Query: 388  RHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALK 567
             HS +SFDHA+DIAAR+RD+ + W LV +MRS +LGP+PKT AI+ ERY S GK  +A++
Sbjct: 101  THSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVR 160

Query: 568  IFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCL 747
             FLSM EHG +QDL+SFN  LD+LCKSKR E A+ L K    RF+ D ++YNI+ANG+CL
Sbjct: 161  TFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCL 220

Query: 748  KKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVS 927
             K+TP AL V++EM++RG+EPT+ TYN +LKGYFR+ QIKE WEF+L+MKKRK EIDVV+
Sbjct: 221  IKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVT 280

Query: 928  YTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEML 1107
            YTTV+HGFGVAG+V+K+++VF EMV  GV+P VATYNALIQVLCKKD VENA+VVF+EM 
Sbjct: 281  YTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMA 340

Query: 1108 RRGY-VPNATTYNVVIRGLCHAGKMDMAIEFMDKM-KDDCEPTIQTFNVVIRYYCDDGEI 1281
            R G  VPN  TYNVVIRGLCH G M+ A+ FM++M +      +QT+NVVIRY+CD GE+
Sbjct: 341  REGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEV 400

Query: 1282 EKALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTF 1461
            EKALEV  KM  G+CLPNLDTYN+LI AMFVRKKS+DL++AGKLL++MVDRGFLPRKFTF
Sbjct: 401  EKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTF 460

Query: 1462 NRVLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            NRVLNGL++TGNQ FA+EILR+QS+CG + R+ +L
Sbjct: 461  NRVLNGLVITGNQDFAKEILRMQSRCGRIVRRLKL 495


>gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score =  611 bits (1575), Expect = e-172
 Identities = 299/455 (65%), Positives = 367/455 (80%), Gaps = 4/455 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP--EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSY 387
            ATIA L+L+ D P +L++AL  +P  +W P LV  +LKRLWNHGPKALQFF  L+ HPSY
Sbjct: 39   ATIAKLVLESD-PLTLSEAL-CMPTIQWAPELVNRVLKRLWNHGPKALQFFKHLDRHPSY 96

Query: 388  RHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALK 567
             H ++SFDHA+DIAAR+ DY   W LV +MRS + GPT +TFAI+ ERY + GK  + ++
Sbjct: 97   IHCSSSFDHAVDIAARMHDYNAAWALVGRMRSLRRGPTHRTFAILGERYAANGKPHRTVR 156

Query: 568  IFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCL 747
             FLSMHEHGC+QDLNSFN  LDVLCKSKR EMA+ L K FR RF+ D +SYNIIANG+CL
Sbjct: 157  TFLSMHEHGCRQDLNSFNTVLDVLCKSKRVEMAHTLLKTFRSRFRLDSVSYNIIANGYCL 216

Query: 748  KKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVS 927
             K+TP AL+V++EM++RG+ PT+ TYN LLKGYFR+ QIKE WEF+L+MKKRK EIDVV+
Sbjct: 217  IKRTPMALQVLKEMVQRGINPTMITYNTLLKGYFRSSQIKEAWEFYLEMKKRKCEIDVVT 276

Query: 928  YTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEML 1107
            YTTV+HGFGVAGEV+KSR+VFDEMV  GV P VAT NALIQVLCKKD VE+A+VVF+EM+
Sbjct: 277  YTTVIHGFGVAGEVKKSRRVFDEMVKEGVAPSVATCNALIQVLCKKDSVESAVVVFEEMV 336

Query: 1108 RRGY-VPNATTYNVVIRGLCHAGKMDMAIEFMDKM-KDDCEPTIQTFNVVIRYYCDDGEI 1281
            R+G  VPN  TYNVVIRG CH G M+ A+ FM +M +     ++QT+NVVIRY+CD GEI
Sbjct: 337  RKGLCVPNLVTYNVVIRGFCHVGDMERALGFMGRMGEHGLRASVQTYNVVIRYFCDAGEI 396

Query: 1282 EKALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTF 1461
            EK LE+  KM    CLPNLDTYN++I AMF+RKKS+DL++AGKLL+EMVDRGFLPRKFTF
Sbjct: 397  EKGLEMFGKMKDEPCLPNLDTYNVVISAMFLRKKSEDLVVAGKLLMEMVDRGFLPRKFTF 456

Query: 1462 NRVLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            NRVLNGL +TGNQ FA+EILR Q +CG + R+ +L
Sbjct: 457  NRVLNGLAITGNQDFAKEILRKQGRCGRVVRRLKL 491


>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  606 bits (1563), Expect = e-171
 Identities = 309/454 (68%), Positives = 354/454 (77%), Gaps = 3/454 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYR 390
            ATI NL+LK D+ ++LT+ L   P EWTP+LV  +LK LWNHGPKALQFF  L+ HP+Y 
Sbjct: 40   ATIVNLVLKTDS-QTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYA 98

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            H ++SFDHAIDIA RLRDYKT WTLV +MR+ +LGP PKTFAIITERYVSAGK D+A+KI
Sbjct: 99   HVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKI 158

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMA-YKLFKIFRGRFKADVISYNIIANGFCL 747
            F SMHEHGC QDLNSFN  LDVLCKSKR EMA  KLFK+FRGRF+               
Sbjct: 159  FFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGRFR--------------- 203

Query: 748  KKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVS 927
                                       ILLKG+FRAGQ+KE WEFFLQMKKRK EIDVV+
Sbjct: 204  ---------------------------ILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVT 236

Query: 928  YTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEML 1107
            YTTVVHGFGVAGEV K+++VF+EM+G GVLP VATYNA IQVLCKKD VENA+ VF+EML
Sbjct: 237  YTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEML 296

Query: 1108 RRGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIE 1284
            R+GY+PN+TTYNVVIRGLCH G+M+ A+EFM +MKDD CEP +Q +NVVIRY+CD  EIE
Sbjct: 297  RKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIE 356

Query: 1285 KALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFN 1464
            K L V EKM    CLPNLDTYNILI AMFVRKKSD LL AGKLLIEMV+RGFLPRKFTFN
Sbjct: 357  KGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFN 416

Query: 1465 RVLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            RVL+GL+LTGNQ FA+EILRLQS+CG LPR+ +L
Sbjct: 417  RVLDGLLLTGNQDFAKEILRLQSRCGRLPRRLKL 450


>ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial isoform X1 [Glycine max]
            gi|571489017|ref|XP_006591093.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g74900,
            mitochondrial isoform X2 [Glycine max]
          Length = 492

 Score =  606 bits (1562), Expect = e-170
 Identities = 293/455 (64%), Positives = 365/455 (80%), Gaps = 4/455 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLLETH-PSY 387
            ATIA L+L+ D P +L++AL      WTP LV   LKRLWNHGPKAL FF  L+ H PSY
Sbjct: 39   ATIAKLVLESD-PRTLSEALTKPRIHWTPELVNKTLKRLWNHGPKALLFFKHLDRHLPSY 97

Query: 388  RHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALK 567
             HS +SFDHA+DIAAR+RD+ + W LV +MRS +LGP+PKT AI+ ERY S GK  +A++
Sbjct: 98   THSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVR 157

Query: 568  IFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCL 747
             FLSMHEHG  QDL+SFN  LD+LCKS R E A+ L +  + RF+ D +SYNI+ANG+CL
Sbjct: 158  TFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCL 217

Query: 748  KKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVS 927
            KK+TP AL V++EM++RG+EPT+ TYN +LKGYFR+ QIKE WEF+L+MKKRK EIDVVS
Sbjct: 218  KKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVS 277

Query: 928  YTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEML 1107
            YTTV+HGFG AGEV+K+++VFDEMV  GV P VATYNALIQV CKKD V+NA+ VF+EM+
Sbjct: 278  YTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMV 337

Query: 1108 RRGYV-PNATTYNVVIRGLCHAGKMDMAIEFMDKM-KDDCEPTIQTFNVVIRYYCDDGEI 1281
            R G   PN  T+NVVIRGLCH G M+ A+ FM++M +     ++QT+NVVIRY+CD GEI
Sbjct: 338  REGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEI 397

Query: 1282 EKALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTF 1461
            EK LEV  KM  G CLPNLDTYN+LI AMFVRKKS+DL++AGKLL+EMV+RGFLPRKFTF
Sbjct: 398  EKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTF 457

Query: 1462 NRVLNGLMLTGNQGFAQEILRLQSKCGSLPRQFRL 1566
            NRVLNGL++TGNQ FA++ILR+QS+CG + R+ +L
Sbjct: 458  NRVLNGLVITGNQDFAKDILRMQSRCGRVVRRLKL 492


>gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
            [Theobroma cacao] gi|508773327|gb|EOY20583.1|
            Pentatricopeptide repeat (PPR) superfamily protein
            isoform 2 [Theobroma cacao]
          Length = 413

 Score =  549 bits (1415), Expect = e-153
 Identities = 271/372 (72%), Positives = 316/372 (84%), Gaps = 3/372 (0%)
 Frame = +1

Query: 214  ATIANLILKGDNPESLTQALHSLP-EWTPHLVQTILKRLWNHGPKALQFFNLL-ETHPSY 387
            A +  LIL   NP+SLTQ+L S    WTP LV TILK+LWNHGPKALQFF+LL   HP+Y
Sbjct: 38   AILTGLILTSTNPKSLTQSLLSPSINWTPLLVDTILKQLWNHGPKALQFFHLLLHNHPTY 97

Query: 388  RHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALK 567
             HS +SFDHAIDIAARLR Y T +TL+ +MRS +L PTPKTFAII ERYV+AGK DKALK
Sbjct: 98   IHSVSSFDHAIDIAARLRHYATVFTLLHRMRSLRLHPTPKTFAIIAERYVAAGKPDKALK 157

Query: 568  IFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCL 747
            IFLSMHEHGC QDL+SFN  LDVLCK+KR E A   FK+ RG+FKADVISYNIIANG+CL
Sbjct: 158  IFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACNFFKVLRGKFKADVISYNIIANGWCL 217

Query: 748  KKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVS 927
             K+T  ALE ++EM+E+GL P LTTYNI+LKGYFRAGQI+EGW+FFL+MKKRK EIDVV+
Sbjct: 218  IKRTNMALETLKEMVEKGLTPNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVT 277

Query: 928  YTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEML 1107
            YTTVVHG GVAGE++++RKVFDEMV  GVLP VATYNALIQVLCKKDCVENA++VF+EML
Sbjct: 278  YTTVVHGLGVAGEIKRARKVFDEMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEML 337

Query: 1108 RRGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIE 1284
            R+GYVPN+TTYNVVIRGLCH  +MD AIEFMDKM+DD C P +QT+N+VIRY+CD GEIE
Sbjct: 338  RKGYVPNSTTYNVVIRGLCHKEQMDRAIEFMDKMRDDECGPNVQTYNIVIRYFCDAGEIE 397

Query: 1285 KALEVLEKMNGG 1320
            K LE+ +KM+ G
Sbjct: 398  KGLELFQKMSCG 409



 Score =  109 bits (273), Expect = 3e-21
 Identities = 104/425 (24%), Positives = 192/425 (45%), Gaps = 4/425 (0%)
 Frame = +1

Query: 280  LPEWTPHLVQTILKRLWNHGPKALQFFNLLETHPSYRHSAASFDHAIDIAARLRDYKTTW 459
            L + TP L +T L     H PK+   F+     P    SAA+      +   +       
Sbjct: 5    LSKLTPPLSKTAL-----HLPKS---FSTTTPQPQNTTSAAAI-----LTGLILTSTNPK 51

Query: 460  TLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKIF-LSMHEHGCQ-QDLNSFNAFLD 633
            +L   + S  +  TP     I ++  + G   KAL+ F L +H H      ++SF+  +D
Sbjct: 52   SLTQSLLSPSINWTPLLVDTILKQLWNHGP--KALQFFHLLLHNHPTYIHSVSSFDHAID 109

Query: 634  VLCKSKRAEMAYKLFKIFRG-RFKADVISYNIIANGFCLKKQTPRALEVMREMIERGLEP 810
            +  + +     + L    R  R      ++ IIA  +    +  +AL++   M E G   
Sbjct: 110  IAARLRHYATVFTLLHRMRSLRLHPTPKTFAIIAERYVAAGKPDKALKIFLSMHEHGCFQ 169

Query: 811  TLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSYTTVVHGFGVAGEVEKSRKVF 990
             L ++N +L    +A ++++   FF ++ + K + DV+SY  + +G+ +      + +  
Sbjct: 170  DLHSFNTILDVLCKAKRVEKACNFF-KVLRGKFKADVISYNIIANGWCLIKRTNMALETL 228

Query: 991  DEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLRRGYVPNATTYNVVIRGLCHA 1170
             EMV  G+ P + TYN +++   +   +E     F EM +R    +  TY  V+ GL  A
Sbjct: 229  KEMVEKGLTPNLTTYNIMLKGYFRAGQIEEGWKFFLEMKKRKCEIDVVTYTTVVHGLGVA 288

Query: 1171 GKMDMAIEFMDKM-KDDCEPTIQTFNVVIRYYCDDGEIEKALEVLEKMNGGTCLPNLDTY 1347
            G++  A +  D+M ++   P++ T+N +I+  C    +E A+ V E+M     +PN  TY
Sbjct: 289  GEIKRARKVFDEMVREGVLPSVATYNALIQVLCKKDCVENAILVFEEMLRKGYVPNSTTY 348

Query: 1348 NILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGNQGFAQEILRL 1527
            N++I  +  +++ D  +   + + +M D    P   T+N V+      G      E+ + 
Sbjct: 349  NVVIRGLCHKEQMDRAI---EFMDKMRDDECGPNVQTYNIVIRYFCDAGEIEKGLELFQK 405

Query: 1528 QSKCG 1542
             S CG
Sbjct: 406  MS-CG 409



 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 61/279 (21%), Positives = 115/279 (41%), Gaps = 4/279 (1%)
 Frame = +1

Query: 727  IANGFCLKKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFF-LQMKKR 903
            I  G  L    P++L   + ++   +  T    + +LK  +  G   +  +FF L +   
Sbjct: 39   ILTGLILTSTNPKSLT--QSLLSPSINWTPLLVDTILKQLWNHGP--KALQFFHLLLHNH 94

Query: 904  KIEIDVVSYTTVVHGFGVAGEVEKSRKVFD---EMVGAGVLPLVATYNALIQVLCKKDCV 1074
               I  VS  +  H   +A  +     VF     M    + P   T+  + +        
Sbjct: 95   PTYIHSVS--SFDHAIDIAARLRHYATVFTLLHRMRSLRLHPTPKTFAIIAERYVAAGKP 152

Query: 1075 ENALVVFDEMLRRGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDDCEPTIQTFNVVI 1254
            + AL +F  M   G   +  ++N ++  LC A +++ A  F   ++   +  + ++N++ 
Sbjct: 153  DKALKIFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACNFFKVLRGKFKADVISYNIIA 212

Query: 1255 RYYCDDGEIEKALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDR 1434
              +C       ALE L++M      PNL TYNI++   F   ++  +    K  +EM  R
Sbjct: 213  NGWCLIKRTNMALETLKEMVEKGLTPNLTTYNIMLKGYF---RAGQIEEGWKFFLEMKKR 269

Query: 1435 GFLPRKFTFNRVLNGLMLTGNQGFAQEILRLQSKCGSLP 1551
                   T+  V++GL + G    A+++     + G LP
Sbjct: 270  KCEIDVVTYTTVVHGLGVAGEIKRARKVFDEMVREGVLP 308


>ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Capsella rubella]
            gi|482570383|gb|EOA34571.1| hypothetical protein
            CARUB_v10022126mg [Capsella rubella]
          Length = 451

 Score =  548 bits (1413), Expect = e-153
 Identities = 275/454 (60%), Positives = 348/454 (76%), Gaps = 5/454 (1%)
 Frame = +1

Query: 220  IANLILKGDNPESLTQALHSLPE--WTPHLVQTILKRLWNHGPKALQFFNLLETHP-SYR 390
            IAN IL   +P ++ Q+L S+    WTP+LV ++LKRLWNHGPKALQFF+ L+TH  SY 
Sbjct: 29   IANQILS--SPTTIDQSLVSIKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDTHHRSYV 86

Query: 391  HSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADKALKI 570
            H A+SFD AIDIAARL  + T W+L+ +MRS ++GP+PKTFAI+ ER+ S+GK DKA+K+
Sbjct: 87   HHASSFDLAIDIAARLHLHPTVWSLLHRMRSLRIGPSPKTFAIVAERFASSGKPDKAVKL 146

Query: 571  FLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANGFCLK 750
            FL+MHEHGC QDL SFN  LDVLCKSKR E AY+LF+  RGRF AD ++YN+I NG+CL 
Sbjct: 147  FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFGADTVTYNVIVNGWCLI 206

Query: 751  KQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEIDVVSY 930
            K+TP+ALEV++EM+ERG++P LTTYN +LKG+FRAGQI+  WEFFL+MKKR  EIDVV+Y
Sbjct: 207  KRTPKALEVLKEMVERGIDPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRNCEIDVVTY 266

Query: 931  TTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFDEMLR 1110
            TTVVHGFGVAGE++++R VFDEM+  GVLP VATYNA+IQVLCKKDCVENA+V+F++M+R
Sbjct: 267  TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDCVENAVVMFEDMVR 326

Query: 1111 RGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDGEIEK 1287
            +GY PN TTYNV+IRGL HAGK     E M +M+++ C+P  QT+N++IRYY +  EI+K
Sbjct: 327  KGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCKPNFQTYNMMIRYYSECSEIDK 386

Query: 1288 ALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNR 1467
            AL +  KM  G CLPNLDTYNILI  MFVRK+S+D+++A                     
Sbjct: 387  ALCLFGKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVA--------------------- 425

Query: 1468 VLNGLMLTGNQGFAQEILRLQSKCGS-LPRQFRL 1566
                    GNQ FA+EILRLQSK GS L R+FRL
Sbjct: 426  --------GNQAFAKEILRLQSKSGSRLLRKFRL 451


>ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis
            thaliana] gi|332197524|gb|AEE35645.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 453

 Score =  545 bits (1405), Expect = e-152
 Identities = 275/458 (60%), Positives = 341/458 (74%), Gaps = 7/458 (1%)
 Frame = +1

Query: 214  ATIANLILKGDNP----ESLTQALHSLPEWTPHLVQTILKRLWNHGPKALQFFNLLETHP 381
            A IA LIL   N     +    +  + P WTP+LV ++LKRLWNHGPKALQFF+ L+ H 
Sbjct: 26   AAIAKLILSSPNTTHQDDQFLLSTKTTP-WTPNLVNSVLKRLWNHGPKALQFFHFLDNHH 84

Query: 382  -SYRHSAASFDHAIDIAARLRDYKTTWTLVCKMRSSKLGPTPKTFAIITERYVSAGKADK 558
              Y H A+SFD AIDIAARL  + T W+L+ +MRS ++GP+PKTFAI+ ERY SAGK DK
Sbjct: 85   REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDK 144

Query: 559  ALKIFLSMHEHGCQQDLNSFNAFLDVLCKSKRAEMAYKLFKIFRGRFKADVISYNIIANG 738
            A+K+FL+MHEHGC QDL SFN  LDVLCKSKR E AY+LF+  RGRF  D ++YN+I NG
Sbjct: 145  AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNG 204

Query: 739  FCLKKQTPRALEVMREMIERGLEPTLTTYNILLKGYFRAGQIKEGWEFFLQMKKRKIEID 918
            +CL K+TP+ALEV++EM+ERG+ P LTTYN +LKG+FRAGQI+  WEFFL+MKKR  EID
Sbjct: 205  WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264

Query: 919  VVSYTTVVHGFGVAGEVEKSRKVFDEMVGAGVLPLVATYNALIQVLCKKDCVENALVVFD 1098
            VV+YTTVVHGFGVAGE++++R VFDEM+  GVLP VATYNA+IQVLCKKD VENA+V+F+
Sbjct: 265  VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324

Query: 1099 EMLRRGYVPNATTYNVVIRGLCHAGKMDMAIEFMDKMKDD-CEPTIQTFNVVIRYYCDDG 1275
            EM+RRGY PN TTYNV+IRGL HAG+     E M +M+++ CEP  QT+N++IRYY +  
Sbjct: 325  EMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECS 384

Query: 1276 EIEKALEVLEKMNGGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKF 1455
            E+EKAL + EKM  G CLPNLDTYNILI  MFVRK+S+D+++A                 
Sbjct: 385  EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVA----------------- 427

Query: 1456 TFNRVLNGLMLTGNQGFAQEILRLQSKCGS-LPRQFRL 1566
                        GNQ FA+EILRLQSK GS L R+FRL
Sbjct: 428  ------------GNQAFAKEILRLQSKSGSRLLRKFRL 453