BLASTX nr result
ID: Rehmannia24_contig00006483
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00006483
(865 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 289 1e-75
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 289 1e-75
gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus pe... 283 6e-74
ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotei... 282 1e-73
ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotei... 279 1e-72
ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotei... 279 1e-72
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 274 3e-71
gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma c... 269 9e-70
gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlise... 263 8e-68
ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Popu... 262 1e-67
ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotei... 260 4e-67
ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citr... 260 4e-67
ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotei... 260 5e-67
ref|XP_003539345.1| PREDICTED: U2 small nuclear ribonucleoprotei... 259 1e-66
ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotei... 258 2e-66
gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus... 257 3e-66
ref|XP_003516604.1| PREDICTED: U2 small nuclear ribonucleoprotei... 256 6e-66
ref|XP_006573645.1| PREDICTED: U2 small nuclear ribonucleoprotei... 255 2e-65
ref|XP_002534389.1| RNA binding protein, putative [Ricinus commu... 248 2e-63
ref|XP_003611682.1| RNA-binding protein with multiple splicing [... 248 3e-63
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 289 bits (739), Expect = 1e-75
Identities = 145/206 (70%), Positives = 165/206 (80%), Gaps = 10/206 (4%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A+HALNGMVFDLEKGSTLYIDLAKSNSRSKR RADD G +K++KG A FSR
Sbjct: 126 DQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGFSR 185
Query: 683 SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSK----------STGTPC 534
D GVGS+H PGMGNSAY+ IGYPSTQS N DG +++ +K TPC
Sbjct: 186 PPDSGVGSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNSSAPYFPQNATPC 245
Query: 533 PTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQG 354
PT+FVANLGPT SE+EL+ +FSRC GFLKLKMQSTYG PVAFVDFQDT CST AL++LQG
Sbjct: 246 PTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQG 305
Query: 353 TVLYSSTSGEGMRLEYAKSRMGMRSK 276
TVLYSS +GEGMR+EYAKSRMG+R K
Sbjct: 306 TVLYSSPAGEGMRIEYAKSRMGLRRK 331
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 289 bits (739), Expect = 1e-75
Identities = 145/206 (70%), Positives = 165/206 (80%), Gaps = 10/206 (4%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A+HALNGMVFDLEKGSTLYIDLAKSNSRSKR RADD G +K++KG A FSR
Sbjct: 129 DQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPGLDKKVKGSAGFSR 188
Query: 683 SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSK----------STGTPC 534
D GVGS+H PGMGNSAY+ IGYPSTQS N DG +++ +K TPC
Sbjct: 189 PPDSGVGSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNSSAPYFPQNATPC 248
Query: 533 PTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQG 354
PT+FVANLGPT SE+EL+ +FSRC GFLKLKMQSTYG PVAFVDFQDT CST AL++LQG
Sbjct: 249 PTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQG 308
Query: 353 TVLYSSTSGEGMRLEYAKSRMGMRSK 276
TVLYSS +GEGMR+EYAKSRMG+R K
Sbjct: 309 TVLYSSPAGEGMRIEYAKSRMGLRRK 334
>gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 283 bits (724), Expect = 6e-74
Identities = 145/207 (70%), Positives = 167/207 (80%), Gaps = 11/207 (5%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A+HALNGMVFDLEKGSTLYIDLAKSNSRSKR R DD GS+K+ +G +
Sbjct: 120 DQQSAIGAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDERSGSDKKARGSSYSRG 179
Query: 683 SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDG--------GSMSGASSK---STGTP 537
+ D GVGSIH PGMGNSAYN IGYPS S N +G G+++ ++++ TP
Sbjct: 180 APDSGVGSIHMPGMGNSAYNIIGYPSAPSHGNFNGIPVHETIAGNVNNSAAQHFPQNNTP 239
Query: 536 CPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQ 357
CPTIFVANLGPT +E+EL+QVFSRC GF+KLKMQSTYGAPVAFVDFQDTACST ALS+LQ
Sbjct: 240 CPTIFVANLGPTCTEQELIQVFSRCPGFIKLKMQSTYGAPVAFVDFQDTACSTGALSHLQ 299
Query: 356 GTVLYSSTSGEGMRLEYAKSRMGMRSK 276
GT+LYSST+GEGMRLEYAKSRMGMR K
Sbjct: 300 GTILYSSTTGEGMRLEYAKSRMGMRKK 326
>ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Solanum tuberosum]
Length = 315
Score = 282 bits (722), Expect = 1e-73
Identities = 146/199 (73%), Positives = 165/199 (82%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQ SA+MA++ LNGMVFD EK S LYI+LAKSNS+SKRLR DDG SEKR+KG AA SR
Sbjct: 118 DQHSALMAMYELNGMVFDFEKDSKLYIELAKSNSKSKRLRPDDGRPVSEKRIKGSAAISR 177
Query: 683 SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSKSTGTPCPTIFVANLGP 504
G GSIH PGMGNSAYNTIGYP TQS DG + A+SK+ PCPT+F+ANLG
Sbjct: 178 DSGTGFGSIHMPGMGNSAYNTIGYPPTQSQGKFDGRVGNQAASKTAADPCPTLFIANLGQ 237
Query: 503 TSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYSSTSGE 324
+ +E+EL+QVFSR RGFLKLKMQSTYGAPVAFVDFQDTA STEALS+LQGT+L+SS SGE
Sbjct: 238 SCTEQELIQVFSRFRGFLKLKMQSTYGAPVAFVDFQDTASSTEALSHLQGTILHSS-SGE 296
Query: 323 GMRLEYAKSRMGMRSKKSR 267
GMRLEYAKSRMG+RSKKSR
Sbjct: 297 GMRLEYAKSRMGLRSKKSR 315
>ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Solanum tuberosum]
Length = 316
Score = 279 bits (713), Expect = 1e-72
Identities = 147/200 (73%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQ SA+MA++ LNGMVFD EK S LYI+LAKSNS+SKRLR DDG SEKR+KG AA SR
Sbjct: 118 DQHSALMAMYELNGMVFDFEKDSKLYIELAKSNSKSKRLRPDDGRPVSEKRIKGSAAISR 177
Query: 683 -SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSKSTGTPCPTIFVANLG 507
S G GSIH PGMGNSAYNTIGYP TQS DG + A+SK+ PCPT+F+ANLG
Sbjct: 178 DSGTAGFGSIHMPGMGNSAYNTIGYPPTQSQGKFDGRVGNQAASKTAADPCPTLFIANLG 237
Query: 506 PTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYSSTSG 327
+ +E+EL+QVFSR RGFLKLKMQSTYGAPVAFVDFQDTA STEALS+LQGT+L+SS SG
Sbjct: 238 QSCTEQELIQVFSRFRGFLKLKMQSTYGAPVAFVDFQDTASSTEALSHLQGTILHSS-SG 296
Query: 326 EGMRLEYAKSRMGMRSKKSR 267
EGMRLEYAKSRMG+RSKKSR
Sbjct: 297 EGMRLEYAKSRMGLRSKKSR 316
>ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 308
Score = 279 bits (713), Expect = 1e-72
Identities = 144/199 (72%), Positives = 163/199 (81%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQ SA++A++ LNGMVFD EK S LYI+LAKSNSRSKRLR DDG SEKR+KG AA SR
Sbjct: 111 DQHSALVAMYELNGMVFDFEKDSKLYIELAKSNSRSKRLRPDDGRSVSEKRIKGSAAISR 170
Query: 683 SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSKSTGTPCPTIFVANLGP 504
G GSIH PGMGNSAYNTIGYP TQS DG + A+SK PCPT+F+ANLG
Sbjct: 171 DSGSGFGSIHMPGMGNSAYNTIGYPPTQSLGKFDGRVGNQAASKKAADPCPTLFIANLGQ 230
Query: 503 TSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYSSTSGE 324
+ +E+EL+QVFSR RGFLKLKMQSTYGAPVAFVDFQDTA STEALS+LQGT+L+SS SG
Sbjct: 231 SCTEQELIQVFSRFRGFLKLKMQSTYGAPVAFVDFQDTASSTEALSHLQGTILHSS-SGV 289
Query: 323 GMRLEYAKSRMGMRSKKSR 267
GM+LEYAKSRMG+RSKKSR
Sbjct: 290 GMQLEYAKSRMGLRSKKSR 308
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 327
Score = 274 bits (701), Expect = 3e-71
Identities = 140/207 (67%), Positives = 160/207 (77%), Gaps = 11/207 (5%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A+ ALNGMVFDLEKGSTLYIDLAKSNSRSKR R DD GS+K+ +G +
Sbjct: 119 DQQSAIGAMQALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDERSGSDKKARGSSYSRA 178
Query: 683 SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSKS-----------TGTP 537
+ DPGVGSIH PGMGNSAYN IGYPS S + G ++ + + TP
Sbjct: 179 TSDPGVGSIHMPGMGNSAYNMIGYPSAPSHGSFSGSGVNETIASNMNISSAQHFPQNNTP 238
Query: 536 CPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQ 357
CPT+FVANLGPT +E+EL+QVFSRC GF+KLKMQSTYG PVAFVDFQDTA ST ALS+LQ
Sbjct: 239 CPTLFVANLGPTCTEQELIQVFSRCPGFIKLKMQSTYGTPVAFVDFQDTASSTGALSHLQ 298
Query: 356 GTVLYSSTSGEGMRLEYAKSRMGMRSK 276
GT+LYSSTSGEGMRLE+AKSRMGMR K
Sbjct: 299 GTILYSSTSGEGMRLEFAKSRMGMRKK 325
>gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 327
Score = 269 bits (688), Expect = 9e-70
Identities = 140/198 (70%), Positives = 162/198 (81%), Gaps = 1/198 (0%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A+ ALNGMVFDLEKGSTL+ID AKSNSRSKR R DD GS+K+ +G +FSR
Sbjct: 132 DQQSAIAAMQALNGMVFDLEKGSTLFIDFAKSNSRSKRPRTDDEWTGSDKKSRG--SFSR 189
Query: 683 -SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGASSKSTGTPCPTIFVANLG 507
+ D G GS+H PGMGNSA+N IGYP QS N D S S A KS+ +PCPT+FVANLG
Sbjct: 190 PTTDSGFGSVHMPGMGNSAHNMIGYPPAQSSGNADANSESTAM-KSSASPCPTLFVANLG 248
Query: 506 PTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYSSTSG 327
+ +EEEL+QVFSRC GFLKLKMQSTYGAPVAFVDFQDTACST A++ LQGT+LYSS +G
Sbjct: 249 ASCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGAMNSLQGTILYSSPAG 308
Query: 326 EGMRLEYAKSRMGMRSKK 273
+GMRLEYAKSRMGMR K+
Sbjct: 309 DGMRLEYAKSRMGMRRKR 326
>gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlisea aurea]
Length = 304
Score = 263 bits (671), Expect = 8e-68
Identities = 137/202 (67%), Positives = 164/202 (81%), Gaps = 3/202 (1%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAA-FS 687
DQ SA++A+H+LNG+VFDLE GSTLYI+LAKSNSRSKR R DD +Q SEKR KG +A FS
Sbjct: 104 DQPSAILAMHSLNGLVFDLETGSTLYINLAKSNSRSKRSRTDDDNQDSEKRFKGESASFS 163
Query: 686 RSDDPGVGSI-HTPGMGNSAYNTIGYPSTQSFRNVDGG-SMSGASSKSTGTPCPTIFVAN 513
R G H G+G+S +NTIGYPS Q + DG +SG++SKS G PCPT+FVAN
Sbjct: 164 RGFGSGKSYFTHITGLGSSVHNTIGYPSPQRYETFDGSVHVSGSNSKSGG-PCPTLFVAN 222
Query: 512 LGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYSST 333
LGP SEEELMQVFSRCRGFLKLK+QSTYGAPVAFVDF+D+ CS+EAL LQG V+YS+T
Sbjct: 223 LGPMCSEEELMQVFSRCRGFLKLKLQSTYGAPVAFVDFKDSGCSSEALRNLQGVVVYSAT 282
Query: 332 SGEGMRLEYAKSRMGMRSKKSR 267
+ +G+RLEYAKSRMG+RSK+SR
Sbjct: 283 THQGLRLEYAKSRMGLRSKRSR 304
>ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| hypothetical protein
POPTR_0007s10740g [Populus trichocarpa]
Length = 323
Score = 262 bits (669), Expect = 1e-67
Identities = 137/201 (68%), Positives = 158/201 (78%), Gaps = 5/201 (2%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQ SAV A+HALNGMVFDLEKGSTLYIDLAKSNSRSKR R DD +K+ + + FS
Sbjct: 121 DQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWSSLDKKARVSSGFSM 180
Query: 683 -SDDPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVD----GGSMSGASSKSTGTPCPTIFV 519
+ D G GS+H PGM NSA+NTIG+PS QS ++D S +G + S+ PCPT+FV
Sbjct: 181 GTPDSGFGSVHLPGMANSAFNTIGFPSAQSPGSIDDRSRNESKAGRMNNSSAPPCPTLFV 240
Query: 518 ANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYS 339
ANLG +EEEL+QVFSRC GFLKLKMQSTYGAPVAFVDFQDTA ST AL++LQGTVLYS
Sbjct: 241 ANLGQNCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTASSTGALNHLQGTVLYS 300
Query: 338 STSGEGMRLEYAKSRMGMRSK 276
S +GEG+RLEYAKSRMGMR K
Sbjct: 301 SVAGEGLRLEYAKSRMGMRRK 321
>ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Citrus
sinensis]
Length = 326
Score = 260 bits (665), Expect = 4e-67
Identities = 138/208 (66%), Positives = 160/208 (76%), Gaps = 12/208 (5%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A++ALNGMVFDLEKGSTLYIDLAKSNSRSKR R DD GS+K+ +G +AFSR
Sbjct: 117 DQQSALGAMYALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSR 176
Query: 683 SD-DPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVD--GGSM---------SGASSKSTGT 540
D G+GS+H PGMGNSA+NTIGYP TQS N D GGS+ S S T
Sbjct: 177 GTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT 236
Query: 539 PCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYL 360
PC T+FVANLGPT +E+EL QVFS+C GFLKLK+QSTYG PVAFVDFQDT ST AL+ L
Sbjct: 237 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQDTVSSTAALNNL 296
Query: 359 QGTVLYSSTSGEGMRLEYAKSRMGMRSK 276
QGT+LYSS + +G+RLE+AKSRMGM K
Sbjct: 297 QGTILYSSPTSDGIRLEFAKSRMGMPRK 324
>ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527947|gb|ESR39197.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 322
Score = 260 bits (665), Expect = 4e-67
Identities = 138/208 (66%), Positives = 160/208 (76%), Gaps = 12/208 (5%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQQSA+ A++ALNGMVFDLEKGSTLYIDLAKSNSRSKR R DD GS+K+ +G +AFSR
Sbjct: 113 DQQSALGAMYALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWTGSDKKARGPSAFSR 172
Query: 683 SD-DPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVD--GGSM---------SGASSKSTGT 540
D G+GS+H PGMGNSA+NTIGYP TQS N D GGS+ S S T
Sbjct: 173 GTADLGIGSVHMPGMGNSAFNTIGYPHTQSHENFDARGGSLITTAKFNNSSAPSGPKNVT 232
Query: 539 PCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYL 360
PC T+FVANLGPT +E+EL QVFS+C GFLKLK+QSTYG PVAFVDFQDT ST AL+ L
Sbjct: 233 PCATLFVANLGPTCTEQELTQVFSKCPGFLKLKIQSTYGPPVAFVDFQDTVSSTAALNNL 292
Query: 359 QGTVLYSSTSGEGMRLEYAKSRMGMRSK 276
QGT+LYSS + +G+RLE+AKSRMGM K
Sbjct: 293 QGTILYSSPTSDGIRLEFAKSRMGMPRK 320
>ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X3
[Glycine max]
Length = 338
Score = 260 bits (664), Expect = 5e-67
Identities = 139/211 (65%), Positives = 164/211 (77%), Gaps = 13/211 (6%)
Frame = -3
Query: 860 QQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYA-AFSR 684
Q+SA++A+HALNG+VFDLEKGSTLYIDLAKSNSRSKR R DD G++K+ +G ++S
Sbjct: 128 QKSAILAMHALNGLVFDLEKGSTLYIDLAKSNSRSKRTRIDDERVGADKKARGLTPSWST 187
Query: 683 SDDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSMSG---ASSKST-------GT 540
D GVGSIH PGMGN A+NT GYPS QS N DG +MS A+ KS+ T
Sbjct: 188 PDSAGVGSIHMPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFANLKSSTPYIPQNST 247
Query: 539 PCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYL 360
PC T+FVANLGP+ +E+EL+QVFSR GFLKLKMQSTYGAPVAFVDFQD ST+AL+ L
Sbjct: 248 PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 307
Query: 359 QGTVLYSSTSGEGMRLEYAKSRMGMRSKKSR 267
QGT+L+SS SGEGMRLEYAKSRMGMR K +R
Sbjct: 308 QGTILHSSQSGEGMRLEYAKSRMGMRRKPNR 338
>ref|XP_003539345.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X1
[Glycine max]
Length = 338
Score = 259 bits (661), Expect = 1e-66
Identities = 137/211 (64%), Positives = 160/211 (75%), Gaps = 13/211 (6%)
Frame = -3
Query: 860 QQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSRS 681
Q+SA++A+HALNG+VFDLEKGSTLYIDLAKSNSRSKR R DD G++K+ +G +
Sbjct: 128 QKSAILAMHALNGLVFDLEKGSTLYIDLAKSNSRSKRTRIDDERVGADKKARGLTPSWST 187
Query: 680 DDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSMSGA-----SSKST------GT 540
D GVGSIH PGMGN A+NT GYPS QS N DG +MS + ST T
Sbjct: 188 PDSGVGSIHMPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFANLKKSSTPYIPQNST 247
Query: 539 PCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYL 360
PC T+FVANLGP+ +E+EL+QVFSR GFLKLKMQSTYGAPVAFVDFQD ST+AL+ L
Sbjct: 248 PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 307
Query: 359 QGTVLYSSTSGEGMRLEYAKSRMGMRSKKSR 267
QGT+L+SS SGEGMRLEYAKSRMGMR K +R
Sbjct: 308 QGTILHSSQSGEGMRLEYAKSRMGMRRKPNR 338
>ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X2
[Glycine max]
Length = 339
Score = 258 bits (660), Expect = 2e-66
Identities = 138/212 (65%), Positives = 162/212 (76%), Gaps = 14/212 (6%)
Frame = -3
Query: 860 QQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYA-AFSR 684
Q+SA++A+HALNG+VFDLEKGSTLYIDLAKSNSRSKR R DD G++K+ +G ++S
Sbjct: 128 QKSAILAMHALNGLVFDLEKGSTLYIDLAKSNSRSKRTRIDDERVGADKKARGLTPSWST 187
Query: 683 SDDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSMSGA-----SSKST------G 543
D GVGSIH PGMGN A+NT GYPS QS N DG +MS + ST
Sbjct: 188 PDSAGVGSIHMPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFANLKKSSTPYIPQNS 247
Query: 542 TPCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSY 363
TPC T+FVANLGP+ +E+EL+QVFSR GFLKLKMQSTYGAPVAFVDFQD ST+AL+
Sbjct: 248 TPCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNS 307
Query: 362 LQGTVLYSSTSGEGMRLEYAKSRMGMRSKKSR 267
LQGT+L+SS SGEGMRLEYAKSRMGMR K +R
Sbjct: 308 LQGTILHSSQSGEGMRLEYAKSRMGMRRKPNR 339
>gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus vulgaris]
Length = 337
Score = 257 bits (657), Expect = 3e-66
Identities = 136/208 (65%), Positives = 157/208 (75%), Gaps = 13/208 (6%)
Frame = -3
Query: 860 QQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSRS 681
QQSA+MA+HA+NGMVFDLEKGSTL+IDLAKSNSRSKR R DD G++K+ + + +
Sbjct: 128 QQSAIMAMHAVNGMVFDLEKGSTLFIDLAKSNSRSKRSRIDDDRAGADKKARSVTSSWAT 187
Query: 680 DDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSMSGA-----SSKST------GT 540
D GV SIH PGMGN AYNT GYPS QS N DG +MS ST T
Sbjct: 188 PDSGVSSIHMPGMGNPAYNTNTFGYPSAQSLGNADGSAMSDGLYMNMKKSSTPYIPQNST 247
Query: 539 PCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYL 360
PC T+FVANLGP+ +E+ELMQVFSR GFLKLKMQSTYGAPVAFVDFQD + STEAL+ L
Sbjct: 248 PCATLFVANLGPSCNEQELMQVFSRYHGFLKLKMQSTYGAPVAFVDFQDASSSTEALNSL 307
Query: 359 QGTVLYSSTSGEGMRLEYAKSRMGMRSK 276
QG++L+SS +GEGMRLEYAKSRMGMR K
Sbjct: 308 QGSILHSSQTGEGMRLEYAKSRMGMRKK 335
>ref|XP_003516604.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X1
[Glycine max]
Length = 332
Score = 256 bits (655), Expect = 6e-66
Identities = 137/211 (64%), Positives = 157/211 (74%), Gaps = 13/211 (6%)
Frame = -3
Query: 860 QQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSRS 681
QQSA+MA HALNG+VFDLEKGS LYIDLAKSNSRSKR R DD G++K+ +G +
Sbjct: 122 QQSAIMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWAT 181
Query: 680 DDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSMSGA-----SSKST------GT 540
D GVGSIH PGMGN A+NT GYPS QS N DG +MSG ST T
Sbjct: 182 PDSGVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNST 241
Query: 539 PCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYL 360
PC T+FVANLG + +E+EL+QVFSR GFLKLKMQSTYGAPVAFVDFQD ST+AL+ L
Sbjct: 242 PCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNSL 301
Query: 359 QGTVLYSSTSGEGMRLEYAKSRMGMRSKKSR 267
QGT+L+SS SGEGMR+EYAKSRMGMR K +R
Sbjct: 302 QGTILHSSQSGEGMRVEYAKSRMGMRKKPNR 332
>ref|XP_006573645.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X3
[Glycine max]
Length = 333
Score = 255 bits (651), Expect = 2e-65
Identities = 137/212 (64%), Positives = 159/212 (75%), Gaps = 14/212 (6%)
Frame = -3
Query: 860 QQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYA-AFSR 684
QQSA+MA HALNG+VFDLEKGS LYIDLAKSNSRSKR R DD G++K+ +G +++
Sbjct: 122 QQSAIMAKHALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDERAGADKKARGLTPSWAT 181
Query: 683 SDDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSMSGA-----SSKST------G 543
D GVGSIH PGMGN A+NT GYPS QS N DG +MSG ST
Sbjct: 182 PDSAGVGSIHMPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVPQNS 241
Query: 542 TPCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSY 363
TPC T+FVANLG + +E+EL+QVFSR GFLKLKMQSTYGAPVAFVDFQD ST+AL+
Sbjct: 242 TPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGSSTDALNS 301
Query: 362 LQGTVLYSSTSGEGMRLEYAKSRMGMRSKKSR 267
LQGT+L+SS SGEGMR+EYAKSRMGMR K +R
Sbjct: 302 LQGTILHSSQSGEGMRVEYAKSRMGMRKKPNR 333
>ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein,
putative [Ricinus communis]
Length = 318
Score = 248 bits (634), Expect = 2e-63
Identities = 131/191 (68%), Positives = 147/191 (76%), Gaps = 5/191 (2%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
DQ SAV A+HALNGMVFDLEKGSTLYIDLAKSNSRSKR R D G +K+ K A +
Sbjct: 123 DQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTADEWPGLDKKAKASPAIPQ 182
Query: 683 SD-DPGVGSIHTPGMGNSAYNTIGYPSTQSFRNVDGGSMSGA----SSKSTGTPCPTIFV 519
S+ D G GS+H PGMGNSAYN IGYP QS D + + S+ S+ PCPT+FV
Sbjct: 183 SNFDSGFGSVHLPGMGNSAYNMIGYPPAQSHGTFDSRAKTETKSINSNNSSAPPCPTLFV 242
Query: 518 ANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSYLQGTVLYS 339
ANLGP +E+EL Q+FSR GFLKLKMQSTYGAPVAFVDFQDTACST AL++LQGTVLYS
Sbjct: 243 ANLGPNCTEQELTQLFSRFAGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQGTVLYS 302
Query: 338 STSGEGMRLEY 306
STSGEGMRLEY
Sbjct: 303 STSGEGMRLEY 313
>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 340
Score = 248 bits (632), Expect = 3e-63
Identities = 132/209 (63%), Positives = 155/209 (74%), Gaps = 13/209 (6%)
Frame = -3
Query: 863 DQQSAVMALHALNGMVFDLEKGSTLYIDLAKSNSRSKRLRADDGSQGSEKRLKGYAAFSR 684
+QQSA+MALHALNGM+FDLEKGSTLYIDLAKSNSR+KR R DD S+K+ +G A+
Sbjct: 130 NQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDDDRASSDKKARGSASSWP 189
Query: 683 SDDPGVGSIHTPGMGNSAYNT--IGYPSTQSFRNVDGGSM-----------SGASSKSTG 543
+ D GV SIH PGMGN A+NT IGYP QS DG +M S +
Sbjct: 190 TPDSGVSSIHMPGMGNPAFNTNMIGYPPAQSHGIADGNAMHDGLFLNLKKCSNPYIPTNT 249
Query: 542 TPCPTIFVANLGPTSSEEELMQVFSRCRGFLKLKMQSTYGAPVAFVDFQDTACSTEALSY 363
TPC T+FVANLGP+ +E+EL+QVFSR GFLKLKMQSTYGAPV+FVDF+D +T AL+
Sbjct: 250 TPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAPVSFVDFKDIPSATVALNS 309
Query: 362 LQGTVLYSSTSGEGMRLEYAKSRMGMRSK 276
LQGT+LYSS +GEGMRLEYAKSRMGMR K
Sbjct: 310 LQGTILYSSPAGEGMRLEYAKSRMGMRRK 338