BLASTX nr result
ID: Rehmannia24_contig00006346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00006346
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006302420.1| hypothetical protein CARUB_v10020501mg, part... 83 4e-14
ref|XP_002888767.1| hypothetical protein ARALYDRAFT_476155 [Arab... 82 1e-13
ref|XP_006340116.1| PREDICTED: spermidine synthase 1-like [Solan... 79 8e-13
sp|O48659.1|SPD2_HYONI RecName: Full=Spermidine synthase 2; Shor... 78 1e-12
sp|Q96556.1|SPD1_DATST RecName: Full=Spermidine synthase 1; Shor... 78 1e-12
gb|AGW82430.1| spermidine synthase [Camellia sinensis] 78 1e-12
ref|XP_004237263.1| PREDICTED: spermidine synthase 1-like [Solan... 77 2e-12
gb|AFF18802.1| spermidine synthase, partial [Dimocarpus longan] 77 3e-12
gb|ACZ73829.1| spermidine synthase [Olea europaea] 75 7e-12
ref|XP_006416052.1| hypothetical protein EUTSA_v10007822mg [Eutr... 74 2e-11
gb|ABK81124.1| spermidine synthase [Nicotiana tabacum] 74 2e-11
sp|Q9ZUB3.1|SPD1_ARATH RecName: Full=Spermidine synthase 1; Shor... 74 2e-11
ref|XP_006438425.1| hypothetical protein CICLE_v10031988mg [Citr... 74 2e-11
pdb|1XJ5|A Chain A, X-Ray Structure Of Spermidine Synthase From ... 74 2e-11
ref|XP_002890597.1| hypothetical protein ARALYDRAFT_889925 [Arab... 74 2e-11
ref|NP_173794.2| spermidine synthase 1 [Arabidopsis thaliana] gi... 74 2e-11
emb|CAO02391.1| spermidine synthase [Cochlearia officinalis] 73 4e-11
sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase; Short=... 72 6e-11
ref|NP_177188.1| Spermidine synthase 2 [Arabidopsis thaliana] gi... 72 8e-11
gb|EOY00385.1| Spermidine synthase 1 [Theobroma cacao] 72 8e-11
>ref|XP_006302420.1| hypothetical protein CARUB_v10020501mg, partial [Capsella rubella]
gi|482571130|gb|EOA35318.1| hypothetical protein
CARUB_v10020501mg, partial [Capsella rubella]
Length = 368
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPIDADES IKS GPL+FYNAEIHSAAFCLPSFA+KVI+SKAN
Sbjct: 324 VNPIDADESSIKSHGPLRFYNAEIHSAAFCLPSFAKKVIDSKAN 367
>ref|XP_002888767.1| hypothetical protein ARALYDRAFT_476155 [Arabidopsis lyrata subsp.
lyrata] gi|297334608|gb|EFH65026.1| hypothetical protein
ARALYDRAFT_476155 [Arabidopsis lyrata subsp. lyrata]
Length = 340
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPIDADES KS GPLKFYNAEIHSAAFCLPSFA+KVI+SKAN
Sbjct: 297 VNPIDADESSSKSHGPLKFYNAEIHSAAFCLPSFAKKVIDSKAN 340
>ref|XP_006340116.1| PREDICTED: spermidine synthase 1-like [Solanum tuberosum]
Length = 309
Score = 78.6 bits (192), Expect = 8e-13
Identities = 34/42 (80%), Positives = 41/42 (97%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESK 238
INPIDAD+SH K++GPLKFYN+EIHSA+FCLPSFA++VIESK
Sbjct: 266 INPIDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKRVIESK 307
>sp|O48659.1|SPD2_HYONI RecName: Full=Spermidine synthase 2; Short=SPDSY 2; AltName:
Full=Putrescine aminopropyltransferase 2
gi|2821957|dbj|BAA24534.1| spermidine synthase 2
[Hyoscyamus niger]
Length = 308
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKA 235
INPIDAD+SH K++GPLKFYN+EIHSA+FCLPSFA++VIES A
Sbjct: 265 INPIDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKRVIESNA 307
>sp|Q96556.1|SPD1_DATST RecName: Full=Spermidine synthase 1; Short=SPDSY 1; AltName:
Full=Putrescine aminopropyltransferase 1
gi|1561577|emb|CAA69420.1| spermidine synthase 1 [Datura
stramonium]
Length = 308
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/42 (78%), Positives = 41/42 (97%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESK 238
INP+DAD+SH K++GPLKFYN+EIHSA+FCLPSFA++VIESK
Sbjct: 265 INPVDADDSHTKTRGPLKFYNSEIHSASFCLPSFAKRVIESK 306
>gb|AGW82430.1| spermidine synthase [Camellia sinensis]
Length = 329
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKA 235
+NPIDAD+SH KSKGPLKFYN+EIH+A+FCLPSFA+KVI+S A
Sbjct: 286 VNPIDADDSHCKSKGPLKFYNSEIHAASFCLPSFAKKVIDSIA 328
>ref|XP_004237263.1| PREDICTED: spermidine synthase 1-like [Solanum lycopersicum]
Length = 309
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/42 (78%), Positives = 40/42 (95%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESK 238
INPID D+SH K++GPLKFYN+EIHSA+FCLPSFA++VIESK
Sbjct: 266 INPIDVDDSHTKTRGPLKFYNSEIHSASFCLPSFAKRVIESK 307
>gb|AFF18802.1| spermidine synthase, partial [Dimocarpus longan]
Length = 165
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESK 238
+NPIDAD +H KS+GPLKFYN+EIHSAAFCLP+FA+KV++SK
Sbjct: 124 VNPIDADNNHSKSRGPLKFYNSEIHSAAFCLPTFAKKVVDSK 165
>gb|ACZ73829.1| spermidine synthase [Olea europaea]
Length = 337
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
INPIDAD SH+ +K PLKFYN+E+HSAAFCLP FA++VIESKAN
Sbjct: 294 INPIDADCSHVNTKRPLKFYNSEMHSAAFCLPLFAKRVIESKAN 337
>ref|XP_006416052.1| hypothetical protein EUTSA_v10007822mg [Eutrema salsugineum]
gi|557093823|gb|ESQ34405.1| hypothetical protein
EUTSA_v10007822mg [Eutrema salsugineum]
Length = 397
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPID ES KS GPLKFYNAEIHSAAFCLPSFA+KVIESKAN
Sbjct: 356 VNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN 397
>gb|ABK81124.1| spermidine synthase [Nicotiana tabacum]
Length = 174
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
INPIDAD SH K+ GP+KFYN+E+H A+FCLPSFA++VIESK N
Sbjct: 109 INPIDADASHNKTLGPMKFYNSELHKASFCLPSFAKRVIESKGN 152
>sp|Q9ZUB3.1|SPD1_ARATH RecName: Full=Spermidine synthase 1; Short=SPDSY 1; AltName:
Full=Putrescine aminopropyltransferase 1
gi|4056467|gb|AAC98040.1| Strong similarity to
gb|AB006693 spermidine synthase from Arabidopsis
thaliana. ESTs gb|AA389822, gb|T41794, gb|N38455,
gb|AI100106, gb|F14442 and gb|F14256 come from this gene
[Arabidopsis thaliana] gi|6468489|emb|CAB61614.1|
spermidine synthase 1 [Arabidopsis thaliana]
gi|6682289|emb|CAB64644.1| spermidine synthase
[Arabidopsis thaliana] gi|17065034|gb|AAL32671.1| Strong
similarity to spermidine synthase [Arabidopsis thaliana]
gi|20260024|gb|AAM13359.1| strong similarity to
spermidine synthase [Arabidopsis thaliana]
Length = 334
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPID ES KS GPLKFYNAEIHSAAFCLPSFA+KVIESKAN
Sbjct: 293 LNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN 334
>ref|XP_006438425.1| hypothetical protein CICLE_v10031988mg [Citrus clementina]
gi|568860644|ref|XP_006483825.1| PREDICTED: spermidine
synthase-like [Citrus sinensis]
gi|557540621|gb|ESR51665.1| hypothetical protein
CICLE_v10031988mg [Citrus clementina]
Length = 345
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/43 (79%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
Frame = -1
Query: 363 INPIDADESHIKS-KGPLKFYNAEIHSAAFCLPSFARKVIESK 238
+NPIDAD+SH S KGPLKFYN+EIH+AAFCLP+FA+KVIESK
Sbjct: 299 VNPIDADDSHCNSSKGPLKFYNSEIHTAAFCLPTFAKKVIESK 341
>pdb|1XJ5|A Chain A, X-Ray Structure Of Spermidine Synthase From Arabidopsis
Thaliana Gene At1g23820 gi|55670891|pdb|1XJ5|B Chain B,
X-Ray Structure Of Spermidine Synthase From Arabidopsis
Thaliana Gene At1g23820 gi|55670892|pdb|1XJ5|C Chain C,
X-Ray Structure Of Spermidine Synthase From Arabidopsis
Thaliana Gene At1g23820 gi|55670893|pdb|1XJ5|D Chain D,
X-Ray Structure Of Spermidine Synthase From Arabidopsis
Thaliana Gene At1g23820 gi|151568152|pdb|2Q41|A Chain A,
Ensemble Refinement Of The Protein Crystal Structure Of
Spermidine Synthase From Arabidopsis Thaliana Gene
At1g23820 gi|151568155|pdb|2Q41|D Chain D, Ensemble
Refinement Of The Protein Crystal Structure Of
Spermidine Synthase From Arabidopsis Thaliana Gene
At1g23820 gi|343197790|pdb|2Q41|B Chain B, Ensemble
Refinement Of The Protein Crystal Structure Of
Spermidine Synthase From Arabidopsis Thaliana Gene
At1g23820 gi|343197791|pdb|2Q41|C Chain C, Ensemble
Refinement Of The Protein Crystal Structure Of
Spermidine Synthase From Arabidopsis Thaliana Gene
At1g23820
Length = 334
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPID ES KS GPLKFYNAEIHSAAFCLPSFA+KVIESKAN
Sbjct: 293 LNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN 334
>ref|XP_002890597.1| hypothetical protein ARALYDRAFT_889925 [Arabidopsis lyrata subsp.
lyrata] gi|297336439|gb|EFH66856.1| hypothetical protein
ARALYDRAFT_889925 [Arabidopsis lyrata subsp. lyrata]
Length = 378
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPID ES KS GPLKFYNAEIHSAAFCLPSFA+KVIESKAN
Sbjct: 337 LNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN 378
>ref|NP_173794.2| spermidine synthase 1 [Arabidopsis thaliana]
gi|332192315|gb|AEE30436.1| spermidine synthase 1
[Arabidopsis thaliana]
Length = 378
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
+NPID ES KS GPLKFYNAEIHSAAFCLPSFA+KVIESKAN
Sbjct: 337 LNPID--ESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKAN 378
>emb|CAO02391.1| spermidine synthase [Cochlearia officinalis]
Length = 328
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/44 (79%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
Frame = -1
Query: 360 NPIDA-DESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
NP+++ DES KS GPLKFYNAEIHSAAFCLPSFA+KVIESK+N
Sbjct: 285 NPVNSIDESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIESKSN 328
>sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase; Short=SPDSY; AltName:
Full=Putrescine aminopropyltransferase
gi|3242659|dbj|BAA29033.1| spermidine synthase [Coffea
arabica]
Length = 316
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
INPIDA++ K+ PLKFYN+EIHSAAFCLPSFA+KVI+SKAN
Sbjct: 273 INPIDANDGRSKTMKPLKFYNSEIHSAAFCLPSFAKKVIDSKAN 316
>ref|NP_177188.1| Spermidine synthase 2 [Arabidopsis thaliana]
gi|12644069|sp|O48661.2|SPD2_ARATH RecName:
Full=Spermidine synthase 2; Short=SPDSY 2; AltName:
Full=Putrescine aminopropyltransferase 2
gi|14030637|gb|AAK52993.1|AF375409_1 At1g70310/F17O7_16
[Arabidopsis thaliana] gi|3176685|gb|AAC18808.1| Strong
similarity to spermidine synthase 1, gb|Y08252 and
possibly closer similarity to spermidine synthase 2
gb|Y08253 from Datura stramonium. ESTs gb|N38155,
gb|T41738, gb|AA597626, gb|AA712967 and gb|AA712346 come
from this gene [Arabidopsis thaliana]
gi|6468491|emb|CAB61615.1| spermidine synthase 2
[Arabidopsis thaliana] gi|56381993|gb|AAV85715.1|
At1g70310 [Arabidopsis thaliana]
gi|332196923|gb|AEE35044.1| Spermidine synthase 2
[Arabidopsis thaliana]
Length = 340
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESKAN 232
++ ID DES IKS PLK+YNAEIHSAAFCLPSFA+KVI+SKAN
Sbjct: 297 VSLIDTDESSIKSHCPLKYYNAEIHSAAFCLPSFAKKVIDSKAN 340
>gb|EOY00385.1| Spermidine synthase 1 [Theobroma cacao]
Length = 346
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = -1
Query: 363 INPIDADESHIKSKGPLKFYNAEIHSAAFCLPSFARKVIESK 238
+NPID+D+S KSK PL+FYN+EIHSAAFCLPSFA+KVI+SK
Sbjct: 304 VNPIDSDDSCCKSKRPLRFYNSEIHSAAFCLPSFAKKVIDSK 345