BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00005809
         (641 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   6e-09
ref|XP_002528986.1| conserved hypothetical protein [Ricinus comm...    64   5e-08
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ...    60   5e-07
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    59   9e-07
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    59   1e-06
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    59   1e-06
ref|XP_006303650.1| hypothetical protein CARUB_v10011649mg [Caps...    59   2e-06
gb|AAD14492.1| Hypothetical protein [Arabidopsis thaliana]             56   8e-06
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise...    56   8e-06
gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]    56   8e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 38/131 (29%), Positives = 62/131 (47%)
 Frame = +1

Query: 88   QIFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSW 267
            ++F WK +   + V T + KR + ++  C  CG ++ET EHL++ C  + R W +S +  
Sbjct: 1064 KLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRI 1123

Query: 268  DCFNDSLGSIRQWWEGVCACHWDQAFQDRIQLTTYXXXXXXKTRNSWVFEEKFTSELDTV 447
               N   GS R W E +   H D  +     +  +        RN WVFE+K  +  + V
Sbjct: 1124 HTGNIEAGSFRIWVESLLDTHKDTEWWALFWMICWNIWLG---RNKWVFEKKKLAFQEVV 1180

Query: 448  SLAWKEWNEFD 480
              A +   EF+
Sbjct: 1181 ERAVRGVMEFE 1191


>ref|XP_002528986.1| conserved hypothetical protein [Ricinus communis]
           gi|223531576|gb|EEF33405.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 133

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 91  IFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSWD 270
           +F+WK L   + + + L++R + V+  C+ CG   ET  HL F C  A  +W++S +S  
Sbjct: 9   VFLWKILSNALSIGSLLVQR-LAVDGTCQRCGAW-ETSGHLFFLCPFAQYVWRISSLSII 66

Query: 271 CFNDSLGSIRQWWEGVCACHWD-QAFQDRIQLTTYXXXXXXKTRNSWVFEEKFTSELDTV 447
                + SI   W+ +CA  W  Q  Q+  ++  +      K RN +VF+  +  E D +
Sbjct: 67  PSVFHVTSITLVWDHLCATLWSFQLDQEPYKIIAHTLWQHWKARNKFVFDNHWLQETDII 126

Query: 448 SLAWKE 465
           S A K+
Sbjct: 127 SQAPKD 132


>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
 Frame = +1

Query: 88   QIFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSW 267
            ++FVWK L+G VPV  +L++R + ++  CK CG  +E++ HLLF C  A R+W L+ ++ 
Sbjct: 1261 KLFVWKVLKGAVPVGERLLERHIDIDPRCKRCG-SNESITHLLFHCQFAQRVWHLAPLAT 1319

Query: 268  -DCFNDSLGSIRQWWEGVCACHWDQAFQDRIQLTTYXXXXXXKTRNSWVFEEKFTSELDT 444
               F   +  +  W                  L  +      K RN +VFE    S  DT
Sbjct: 1320 APDFRGMIDLMADWPALSNLKALPPTGIASGNLVPWIFWNIWKARNRFVFEGVSASPEDT 1379

Query: 445  VSLA---WKEWN 471
            +S A    +EW+
Sbjct: 1380 LSSAIRLAREWS 1391


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
 Frame = +1

Query: 94   FVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSWDC 273
            F W+CL G +    +L  R +  E +C  CG E+E++ HLLF C  + +IW LS +    
Sbjct: 938  FEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSE 997

Query: 274  FNDSLGSIRQWWEGVCA--CHWDQAFQDRIQLTTYXXXXXXKTRNSWVFEEKFTSELDTV 447
            +     S+   ++ + +    +D A +D +++  +      K+RN ++FE    S    +
Sbjct: 998  YIFPRNSLFYNFDFLLSRGKEFDIA-EDIMEIFPWILWYIWKSRNRFIFENVIESPQVIL 1056

Query: 448  SLA------WKEWNEFDTIT 489
              A      WK+ N  +  T
Sbjct: 1057 DFAIQEANVWKQANSKEVAT 1076


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/70 (35%), Positives = 43/70 (61%)
 Frame = +1

Query: 88   QIFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSW 267
            ++F+W+ L   +PV  ++I+R +P++  C+ CG E E++ H+LF C+ A ++W LS V  
Sbjct: 1058 KLFLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGVPT 1117

Query: 268  DCFNDSLGSI 297
              F     SI
Sbjct: 1118 SQFGFQNSSI 1127


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +1

Query: 94   FVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSWD- 270
            F+W+CL G +   T+L  R++P +  C+ C   DET+ H++F C+ A  +W+ +  S   
Sbjct: 1400 FIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSGSN 1459

Query: 271  --CFNDSL 288
              CF D+L
Sbjct: 1460 RLCFTDNL 1467


>ref|XP_006303650.1| hypothetical protein CARUB_v10011649mg [Capsella rubella]
           gi|482572361|gb|EOA36548.1| hypothetical protein
           CARUB_v10011649mg [Capsella rubella]
          Length = 261

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
 Frame = +1

Query: 91  IFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSWD 270
           +F+WKCL G +P   +L+ R +P    C  CG E E++ HLLF C  ++ IW L      
Sbjct: 1   MFLWKCLHGAIPTGQQLVSRHIPANLACDLCG-EPESILHLLFHCRFSIDIWALMPFVDP 59

Query: 271 CFNDSLGSIRQWWEGVCACHWDQAFQDRIQLTT-----YXXXXXXKTRNSWVFEEKFTSE 435
             +  + S+R   EG+ A +  +     + LT+     +      KTRN  VF  +  S 
Sbjct: 60  FPSSQVTSVR---EGLLAVN-SRLCLPPLGLTSGPLAPWVCWNIWKTRNQRVFNSRSFSV 115

Query: 436 LDTV---SLAWKEW 468
            +T+    L  KEW
Sbjct: 116 RETLLKSILDAKEW 129


>gb|AAD14492.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 240

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/56 (44%), Positives = 33/56 (58%)
 Frame = +1

Query: 94  FVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQV 261
           F+W+ L G VP+   L KR +  E  C  CG  +ET+ H LF C  A +IW LSQ+
Sbjct: 30  FLWQILAGCVPITDNLRKRGINCEIGCSRCGALEETINHTLFLCHPARQIWALSQI 85


>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
          Length = 1503

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/81 (29%), Positives = 40/81 (49%)
 Frame = +1

Query: 91   IFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSWD 270
            +F+W+   G +P    L +R +P++  C  C    E+  H+L  C  A+++W LS + W 
Sbjct: 1394 LFMWRLAHGCLPTNETLWRRRIPIDKECSICLNRTESDRHILLECPPAIQVWALSDLPW- 1452

Query: 271  CFNDSLGSIRQWWEGVCACHW 333
                  G+I  W +G  A  W
Sbjct: 1453 ------GAINTWRDGASAIDW 1467


>gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
          Length = 290

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/121 (26%), Positives = 60/121 (49%)
 Frame = +1

Query: 91  IFVWKCLQGVVPVQTKLIKRDVPVEAICKWCGVEDETLEHLLFFCARAVRIWKLSQVSWD 270
           +F+WK +  ++P +++LIKR V +E +C  C +E ET  H L  C  +  +W  ++  + 
Sbjct: 76  LFMWKVIHDILPTRSELIKRGVNIELMCPLCEIEVETAFHCLCNCQFSRLVWLTTKCGFR 135

Query: 271 CFNDSLGSIRQWWEGVCACHWDQAFQDRIQLTTYXXXXXXKTRNSWVFEEKFTSELDTVS 450
             ++   SI  W +GV    ++   +D  +          KTRN  VF +  ++ +  V 
Sbjct: 136 DISNFHDSIIDWLQGV----FEVLNKDETEEFICLLWAIWKTRNVVVFNQSRSTPMVVVE 191

Query: 451 L 453
           +
Sbjct: 192 I 192