BLASTX nr result

ID: Rehmannia24_contig00005770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00005770
         (698 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]...   100   3e-19
gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]      79   3e-15
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    70   5e-10
ref|XP_002535311.1| conserved hypothetical protein [Ricinus comm...    54   8e-09

>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803272|gb|AGC79007.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 602

 Score =  100 bits (250), Expect = 3e-19
 Identities = 50/58 (86%), Positives = 50/58 (86%)
 Frame = +2

Query: 524 MGQRIKRFDFVSRDPPQVGFESRVMGHYPARFGEHL*SALVNRSPPIKQEGSGSSHGG 697
           MGQRIKRFDFVSRD PQVGFESRVMG YPARFGEH  SALVN SP IKQE SG SHGG
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGEHFLSALVNGSPSIKQERSGYSHGG 58


>gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]
          Length = 69

 Score = 79.3 bits (194), Expect(2) = 3e-15
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -2

Query: 658 GASIHQRRLQVLSEPCWIVTHHTALKPNLWWIPGDKV 548
           GASIHQRRL+VLSEPCWIVTHHTALKPNLWWIP D +
Sbjct: 17  GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPADVI 53



 Score = 29.3 bits (64), Expect(2) = 3e-15
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -3

Query: 696 PPWEEPLPSCLMGG 655
           PPWEEPL SCL+ G
Sbjct: 4   PPWEEPLLSCLIVG 17


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 38/58 (65%), Positives = 38/58 (65%)
 Frame = +2

Query: 524 MGQRIKRFDFVSRDPPQVGFESRVMGHYPARFGEHL*SALVNRSPPIKQEGSGSSHGG 697
           MGQRIKRFDFVSRD PQVGFESRVMG YPARFGE                 SG SHGG
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE-----------------SGYSHGG 41


>ref|XP_002535311.1| conserved hypothetical protein [Ricinus communis]
           gi|223523476|gb|EEF27072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 54.3 bits (129), Expect(2) = 8e-09
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -2

Query: 484 SRDRLSFKPLSFGSDKSSPFGRFAQV 407
           +RDRLSFKPLSFGSDKSSPFGRFAQV
Sbjct: 9   ARDRLSFKPLSFGSDKSSPFGRFAQV 34



 Score = 32.3 bits (72), Expect(2) = 8e-09
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
 Frame = -3

Query: 414 LRWSS--LIFPNVQRFE-MRKEHRPSAMNE 334
           +RWSS  + FPNV+    +RKEHRPS +NE
Sbjct: 34  VRWSSRSVGFPNVKSCSGLRKEHRPSTLNE 63


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