BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00005502
         (1200 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   308   4e-81
gb|EOY11780.1| Phytochrome interacting factor 3, putative isofor...   306   1e-80
ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [S...   305   2e-80
gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus pe...   304   5e-80
ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [S...   302   2e-79
emb|CBI39676.3| unnamed protein product [Vitis vinifera]              302   2e-79
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]     302   2e-79
gb|EOY11783.1| Phytochrome interacting factor 3, putative isofor...   301   3e-79
gb|EOY11781.1| Phytochrome interacting factor 3, putative isofor...   292   2e-76
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...   288   2e-75
gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsa...   288   4e-75
gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsa...   288   4e-75
gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsa...   287   7e-75
gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsa...   285   3e-74
gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsa...   285   3e-74
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]     283   1e-73
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot...   280   1e-72
ref|XP_002330047.1| predicted protein [Populus trichocarpa]           280   1e-72
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...   279   2e-72
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...   275   3e-71

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  308 bits (788), Expect = 4e-81
 Identities = 175/367 (47%), Positives = 224/367 (61%), Gaps = 16/367 (4%)
 Frame = +2

Query: 26   AIVNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMX 205
            A V+ +  V    ++  P E++  + QE + KN+KS      A + KG+P GE+ +EP  
Sbjct: 341  ASVDLKPVVAKTMEEPLPAEQSPVICQEGACKNEKSSNQVLGARTAKGIPDGEKTIEPAV 400

Query: 206  XXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARG-SGSKR 382
                       +R S +  HN KRK RDTEESEC S+D+E ESVGV+K+  A+G +GSKR
Sbjct: 401  ACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKR 460

Query: 383  SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSM 562
            SRAAEVHNLSERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSM
Sbjct: 461  SRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSM 520

Query: 563  GAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-----PIFPV 727
            G GLCMP MM PTGMQH+H AH+ HF P                           P    
Sbjct: 521  GTGLCMPPMMLPTGMQHIHAAHMGHFPPMGVGMGMGMGMGYGMGMLDMNGGSPSCPFIQA 580

Query: 728  PPLQAPHFPS---SMPTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMG 898
            PP+Q  HFP    S+P N   M G NL V+G PGQG+P S+P  P +P++G P + S+M 
Sbjct: 581  PPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQGIPLSMPHAPLIPMSGSPLMKSSMA 640

Query: 899  SHNA-------VPSTSPIMNSGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSA 1057
             +++       VP ++P  +S D + + +SQ+  N +A SS+        A+++   QSA
Sbjct: 641  LNDSGAAGSMEVPDSAPASSSKDLIQNVNSQVMQNNDANSSM--------ASSQCQEQSA 692

Query: 1058 ATQENKQ 1078
              Q+N Q
Sbjct: 693  LVQKNDQ 699


>gb|EOY11780.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
            cacao]
          Length = 729

 Score =  306 bits (783), Expect = 1e-80
 Identities = 178/361 (49%), Positives = 215/361 (59%), Gaps = 12/361 (3%)
 Frame = +2

Query: 83   ERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQT 262
            E  + + +E + KN K+        ++KG+P G++ VEP+            +R S +  
Sbjct: 364  EPIDAICEENTPKNVKNPSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPV 423

Query: 263  HNSKRKFRDTEESECRSDDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRIN 439
            +N KRK RD EESEC S+D E ESVGVKK   ARG SGSKRSRAAEVHNLSERRRRDRIN
Sbjct: 424  YNLKRKSRDNEESECPSEDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRIN 483

Query: 440  EKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMH 619
            EKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM PTGMQHMH
Sbjct: 484  EKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMH 543

Query: 620  PAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMPG 790
             AH+ HFSP                     S   P+  VPP+    F    PT  Q M G
Sbjct: 544  AAHMAHFSPMGVGLGMGMGFGMPLPDMNAGSSARPMVQVPPIHGAPFSGPGPTALQGMAG 603

Query: 791  PNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG--------D 946
             NL ++G PGQGLP S+P TP +P++G   +  AMG  +A     P+ N G        D
Sbjct: 604  SNLQLFGLPGQGLPMSMPHTPLIPISGGHLMKPAMGL-SACGLVGPMDNMGSATASSSKD 662

Query: 947  PLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTST 1126
            P+ + +SQ+  N    SS+NQ  +Q   TN+   Q AA QEN Q +  +G     S    
Sbjct: 663  PVQNINSQVAQNTNVNSSMNQTPSQCPTTNQSFEQPAAVQENGQASEITGSVPFRSADGN 722

Query: 1127 D 1129
            +
Sbjct: 723  E 723


>ref|XP_006358519.1| PREDICTED: transcription factor PIF3-like [Solanum tuberosum]
          Length = 716

 Score =  305 bits (782), Expect = 2e-80
 Identities = 184/379 (48%), Positives = 223/379 (58%), Gaps = 18/379 (4%)
 Frame = +2

Query: 32   VNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXX 211
            + SR    + H  SC  E+++N  ++ S  ND +      A +TK +  GER VE     
Sbjct: 339  LESRPSGASFHDRSCQVEQSDNAFRDCSSNNDNTRDQFTGAKATKDIADGERNVEHGVAC 398

Query: 212  XXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARG-SGSKRSR 388
                     +R S +Q  N KRK RD EESECRS+D+E ESVG+KKT  ARG +GSKRSR
Sbjct: 399  SSVCSGSSAERGSSDQPLNLKRKTRDNEESECRSEDVEEESVGIKKTCAARGGTGSKRSR 458

Query: 389  AAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGA 568
            AAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMG 
Sbjct: 459  AAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGT 518

Query: 569  GLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-------PIFPV 727
            G C+P MMFPTG+QHMH A +PHF+P                             P++P+
Sbjct: 519  GFCVPPMMFPTGVQHMHGAQMPHFAPMSLGMGMGMGMGMGFGMGMLEMNGRSSGYPMYPM 578

Query: 728  PPLQAPHFPSSMPTNFQRMPG---PNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMG 898
            P +Q  HFPS         PG    N   Y HPGQGLP S+PR    PL GQP   +A+ 
Sbjct: 579  PSVQGGHFPSPPIPASTAYPGIAVSNRHAYAHPGQGLPMSIPRASLGPLAGQPSTGAAVP 638

Query: 899  SHNA-------VPSTSPIMNSGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSA 1057
             + A       + S  P ++S  P+   +SQ+  NAEA    NQ  +Q+QATNEVL +SA
Sbjct: 639  MNVARAGVPVEIRSAPPNLDSKTPVHK-NSQIVQNAEASRPQNQTCSQVQATNEVLEKSA 697

Query: 1058 ATQENKQPAGASGPATLTS 1114
               +    A  S    LT+
Sbjct: 698  QKNDQLPDAIDSAANRLTN 716


>gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
          Length = 744

 Score =  304 bits (778), Expect = 5e-80
 Identities = 181/374 (48%), Positives = 221/374 (59%), Gaps = 18/374 (4%)
 Frame = +2

Query: 65   KDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDR 244
            ++SC  +++E   QE + KND +        + + +  GE+ +EP+            +R
Sbjct: 351  EESCAAKQSEAACQEDASKNDTNTNHIPCESANRVLRDGEKTLEPVVASSVCSGNSV-ER 409

Query: 245  VSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARGSGSKRSRAAEVHNLSERRR 424
             S + TH  KRK RDT+ESEC SDD+E ESVGVKK  HARG GSKRSRAAEVHNLSERRR
Sbjct: 410  GSDDPTHALKRKSRDTDESECHSDDVEEESVGVKKIAHARGMGSKRSRAAEVHNLSERRR 469

Query: 425  RDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTG 604
            RDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MMFP G
Sbjct: 470  RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMFPAG 529

Query: 605  MQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-------PIFPVPPLQAPHFPSSM 763
            MQHMH   + HFSP                             P+  VPP+Q  HFP+S 
Sbjct: 530  MQHMHAPRMAHFSPMGLGMGMGMGLGMGFGMGMPDMNGGSSSFPMLQVPPMQGAHFPNSP 589

Query: 764  ---PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIM 934
                T F  M G NL ++G PGQG+P  + R P VP +G P + S++G  NA  +  P+ 
Sbjct: 590  MAGHTAFNGMVGSNLQMFGLPGQGVPMPMQRPPLVPSSGGPFMKSSVGL-NACGAGGPME 648

Query: 935  NSGDPLTSGS--------SQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGA 1090
            N+     SGS        SQ+  N  A SS+NQ ++Q QATNE   Q A  + N Q A  
Sbjct: 649  NAESTPVSGSKDSVQNMNSQVVQNTNANSSMNQTSSQCQATNEGFGQPALVRNNVQAADV 708

Query: 1091 SGPATLTSTTSTDI 1132
                   S++  D+
Sbjct: 709  DNNRANRSSSGNDV 722


>ref|XP_004230368.1| PREDICTED: transcription factor PIF3-like [Solanum lycopersicum]
          Length = 723

 Score =  302 bits (774), Expect = 2e-79
 Identities = 186/381 (48%), Positives = 227/381 (59%), Gaps = 14/381 (3%)
 Frame = +2

Query: 32   VNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXX 211
            + SR    + H  SC  E+++N  ++ S  ND +     +A +TK +  GER VE     
Sbjct: 339  LESRPSGASFHDRSCQAEQSDNAFRDCSSNNDNTHDHFTSAKATKDIADGERNVEHGVAC 398

Query: 212  XXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARG-SGSKRSR 388
                     +R S +Q  N KRK RD EE ECRS+D+E ESVG+KK   ARG +GSKRSR
Sbjct: 399  SSVCSGSSAERGSSDQPLNLKRKTRDNEEFECRSEDVEEESVGIKKPCAARGGTGSKRSR 458

Query: 389  AAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGA 568
            AAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMS+GA
Sbjct: 459  AAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSVGA 518

Query: 569  GLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS---PIFPVPPLQ 739
            GLC+P MMFP  MQHMH A +PHFSP                     S   P++P+P +Q
Sbjct: 519  GLCVPPMMFP--MQHMHGAQMPHFSPMSLGMGMGMGFGLGMLEMNGRSSGYPMYPMPSVQ 576

Query: 740  APHFPSSMPTNFQRMPG---PNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNA 910
              HFPS         PG    N  V+ HPGQGLP S+PR    PL GQP   +A+  + A
Sbjct: 577  GGHFPSPPIPASTAYPGIAVSNRHVFAHPGQGLPMSIPRASLGPLAGQPSTGAAVPMNVA 636

Query: 911  -------VPSTSPIMNSGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQE 1069
                   +    P ++S  P+   +SQ+  NAEA    NQ  +Q+QATNEVL +SA  Q+
Sbjct: 637  REGVPVEIRGAQPNLDSKTPVHK-NSQIVQNAEASCPQNQTCSQVQATNEVLEKSA--QK 693

Query: 1070 NKQPAGASGPATLTSTTSTDI 1132
            N Q     G A    T  T++
Sbjct: 694  NDQLPDVIGSAANRLTNRTNV 714


>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  302 bits (774), Expect = 2e-79
 Identities = 171/346 (49%), Positives = 213/346 (61%), Gaps = 16/346 (4%)
 Frame = +2

Query: 104  QEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQTHNSKRKF 283
            QE + KN+KS      A + KG+P GE+ +EP             +R S +  HN KRK 
Sbjct: 231  QEGACKNEKSSNQVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKHNLKRKC 290

Query: 284  RDTEESECRSDDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRINEKMRALQ 460
            RDTEESEC S+D+E ESVGV+K+  A+G +GSKRSRAAEVHNLSERRRRDRINEKMRALQ
Sbjct: 291  RDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQ 350

Query: 461  ELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHF 640
            ELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMG GLCMP MM PTGMQH+H AH+ HF
Sbjct: 351  ELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHF 410

Query: 641  SPXXXXXXXXXXXXXXXXXXXXXS-----PIFPVPPLQAPHFPS---SMPTNFQRMPGPN 796
             P                           P    PP+Q  HFP    S+P N   M G N
Sbjct: 411  PPMGVGMGMGMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSN 470

Query: 797  LPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNA-------VPSTSPIMNSGDPLT 955
            L V+G PGQG+P S+P  P +P++G P + S+M  +++       VP ++P  +S D + 
Sbjct: 471  LQVFGLPGQGIPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQ 530

Query: 956  SGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
            + +SQ+  N +A SS+        A+++   QSA  Q+N Q    S
Sbjct: 531  NVNSQVMQNNDANSSM--------ASSQCQEQSALVQKNDQAPDVS 568


>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
          Length = 758

 Score =  302 bits (773), Expect = 2e-79
 Identities = 187/399 (46%), Positives = 224/399 (56%), Gaps = 33/399 (8%)
 Frame = +2

Query: 32   VNSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNT---ADSTKGVPYGERVVEPM 202
            VN +     + ++ C  + +E + +E + KND    I+N+     + + +P GE+ +EP+
Sbjct: 341  VNLKPSEARSLEEPCAAKDSEAVCREDASKND----INNSFPCESTNRALPDGEKNIEPV 396

Query: 203  XXXXXXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARGSGSKR 382
                        +R S + TH  KRKFRDTE+SEC S+D+E ESVGVKKT   R SGSKR
Sbjct: 397  VASSSVCSGNSVERASDDPTHVLKRKFRDTEDSECHSEDVEEESVGVKKTAPPRASGSKR 456

Query: 383  SRAAEVHNLSER-------------RRRDRINEKMRALQELIPNCNKADKASMLDEAIEY 523
            SRAAEVHNLSER             RRRDRINEKMRALQELIPNCNK DKASMLDEAIEY
Sbjct: 457  SRAAEVHNLSERILNGFFIFHLSEQRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEY 516

Query: 524  LKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXX 703
            LKTLQLQVQIMSMGAGLCMP MM PTGMQ MH  H+ HF P                   
Sbjct: 517  LKTLQLQVQIMSMGAGLCMPPMMLPTGMQPMHAPHMTHFLPMGVGMGMGLGMGFGMGMPD 576

Query: 704  XXS-----PIFPVPPLQAPHFPS-SMPTN---FQRMPGPNLPVYGHPGQGLPNSVPRTPF 856
                    P+F  PP+Q  HFP   MP +   F  M GPNL V+G PGQGL   + R P 
Sbjct: 577  MNGGSSGYPMFQFPPMQGAHFPGPPMPGHTAAFHGMTGPNLQVFGLPGQGLSMPMQRAPL 636

Query: 857  VPLTGQPPVTSAM--------GSHNAVPSTSPIMNSGDPLTSGSSQLKGNAEAGSSINQK 1012
            VP+ G P + SAM        GS   + ST P   S DP  +  S +  NA   SS+NQ 
Sbjct: 637  VPVLGGPFMKSAMGLNASGAGGSMENMESTQP-YTSKDPAQNMGSHVVQNAGPSSSMNQT 695

Query: 1013 TNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTSTD 1129
             +Q QATNE   QS   Q N Q +  +G     S    D
Sbjct: 696  NSQCQATNEGFEQSPLVQSNVQVSDVNGNKASASANGND 734


>gb|EOY11783.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
            cacao]
          Length = 730

 Score =  301 bits (771), Expect = 3e-79
 Identities = 178/362 (49%), Positives = 215/362 (59%), Gaps = 13/362 (3%)
 Frame = +2

Query: 83   ERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQT 262
            E  + + +E + KN K+        ++KG+P G++ VEP+            +R S +  
Sbjct: 364  EPIDAICEENTPKNVKNPSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPV 423

Query: 263  HNSKRKFRDTEESECRSDDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRIN 439
            +N KRK RD EESEC S+D E ESVGVKK   ARG SGSKRSRAAEVHNLSERRRRDRIN
Sbjct: 424  YNLKRKSRDNEESECPSEDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRIN 483

Query: 440  EKMRALQELIPNCNK-ADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHM 616
            EKMRALQELIPNCNK  DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM PTGMQHM
Sbjct: 484  EKMRALQELIPNCNKKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHM 543

Query: 617  HPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMP 787
            H AH+ HFSP                     S   P+  VPP+    F    PT  Q M 
Sbjct: 544  HAAHMAHFSPMGVGLGMGMGFGMPLPDMNAGSSARPMVQVPPIHGAPFSGPGPTALQGMA 603

Query: 788  GPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG-------- 943
            G NL ++G PGQGLP S+P TP +P++G   +  AMG  +A     P+ N G        
Sbjct: 604  GSNLQLFGLPGQGLPMSMPHTPLIPISGGHLMKPAMGL-SACGLVGPMDNMGSATASSSK 662

Query: 944  DPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGASGPATLTSTTS 1123
            DP+ + +SQ+  N    SS+NQ  +Q   TN+   Q AA QEN Q +  +G     S   
Sbjct: 663  DPVQNINSQVAQNTNVNSSMNQTPSQCPTTNQSFEQPAAVQENGQASEITGSVPFRSADG 722

Query: 1124 TD 1129
             +
Sbjct: 723  NE 724


>gb|EOY11781.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
            cacao]
          Length = 731

 Score =  292 bits (748), Expect = 2e-76
 Identities = 170/334 (50%), Positives = 205/334 (61%), Gaps = 12/334 (3%)
 Frame = +2

Query: 83   ERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCEQT 262
            E  + + +E + KN K+        ++KG+P G++ VEP+            +R S +  
Sbjct: 364  EPIDAICEENTPKNVKNPSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPV 423

Query: 263  HNSKRKFRDTEESECRSDDIETESVGVKKTTHARG-SGSKRSRAAEVHNLSERRRRDRIN 439
            +N KRK RD EESEC S+D E ESVGVKK   ARG SGSKRSRAAEVHNLSERRRRDRIN
Sbjct: 424  YNLKRKSRDNEESECPSEDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRIN 483

Query: 440  EKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQHMH 619
            EKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM PTGMQHMH
Sbjct: 484  EKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMH 543

Query: 620  PAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS---PIFPVPPLQAPHFPSSMPTNFQRMPG 790
             AH+ HFSP                     S   P+  VPP+    F    PT  Q M G
Sbjct: 544  AAHMAHFSPMGVGLGMGMGFGMPLPDMNAGSSARPMVQVPPIHGAPFSGPGPTALQGMAG 603

Query: 791  PNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG--------D 946
             NL ++G PGQGLP S+P TP +P++G   +  AMG  +A     P+ N G        D
Sbjct: 604  SNLQLFGLPGQGLPMSMPHTPLIPISGGHLMKPAMGL-SACGLVGPMDNMGSATASSSKD 662

Query: 947  PLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLN 1048
            P+ + +SQ+  N    SS+NQ  + +Q   +VLN
Sbjct: 663  PVQNINSQVAQNTNVNSSMNQTPSSVQQQIKVLN 696


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
            gi|550324617|gb|EEE95373.2| hypothetical protein
            POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score =  288 bits (738), Expect = 2e-75
 Identities = 174/374 (46%), Positives = 212/374 (56%), Gaps = 13/374 (3%)
 Frame = +2

Query: 53   VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 232
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 333  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 392

Query: 233  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 409
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 393  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 452

Query: 410  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 589
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 453  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 512

Query: 590  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 763
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 513  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSQM 572

Query: 764  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 937
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 573  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 631

Query: 938  --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 632  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 691

Query: 1094 GPATLTSTTSTDIS 1135
                L S   TDI+
Sbjct: 692  ESGVLKSAGGTDIT 705


>gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
            gi|339778393|gb|AEK06078.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778395|gb|AEK06079.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778399|gb|AEK06081.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778401|gb|AEK06082.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778405|gb|AEK06084.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778407|gb|AEK06085.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778409|gb|AEK06086.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778411|gb|AEK06087.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778413|gb|AEK06088.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778415|gb|AEK06089.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778417|gb|AEK06090.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778419|gb|AEK06091.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778421|gb|AEK06092.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778423|gb|AEK06093.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778425|gb|AEK06094.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778427|gb|AEK06095.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
            gi|339778429|gb|AEK06096.1| phytochrome-interacting
            factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  288 bits (736), Expect = 4e-75
 Identities = 177/382 (46%), Positives = 215/382 (56%), Gaps = 15/382 (3%)
 Frame = +2

Query: 53   VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 232
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 233  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 409
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 410  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 589
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 590  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 763
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 764  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 937
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 938  --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1094 GPATLTSTTSTDI--SKEPGFD 1153
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  288 bits (736), Expect = 4e-75
 Identities = 177/382 (46%), Positives = 215/382 (56%), Gaps = 15/382 (3%)
 Frame = +2

Query: 53   VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 232
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 233  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 409
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 410  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 589
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGIYMPSM 388

Query: 590  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 763
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 764  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 937
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 938  --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMRNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1094 GPATLTSTTSTDI--SKEPGFD 1153
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  287 bits (734), Expect = 7e-75
 Identities = 177/382 (46%), Positives = 214/382 (56%), Gaps = 15/382 (3%)
 Frame = +2

Query: 53   VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 232
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 233  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 409
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 410  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 589
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 590  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 763
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 764  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 937
              P+    M GP+L ++G  GQGLP   PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMPFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 938  --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
                    S D + + +SQ+  N  A  SINQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSINQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1094 GPATLTSTTSTDI--SKEPGFD 1153
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  285 bits (728), Expect = 3e-74
 Identities = 176/382 (46%), Positives = 214/382 (56%), Gaps = 15/382 (3%)
 Frame = +2

Query: 53   VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 232
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 233  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 409
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 410  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 589
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 590  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 763
            M P GM HMH AH+  F P                       P++ VPP+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPM 448

Query: 764  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 937
              P+    M G +L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGSSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 938  --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1094 GPATLTSTTSTDI--SKEPGFD 1153
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  285 bits (728), Expect = 3e-74
 Identities = 176/382 (46%), Positives = 214/382 (56%), Gaps = 15/382 (3%)
 Frame = +2

Query: 53   VNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXX 232
            V   + S P E  E + QE   K+D++   +    + KG+   E+  EP+          
Sbjct: 209  VKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGN 268

Query: 233  XXDRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNL 409
              +R S + T N KRK RDTEESE  S+D E ESVG KK   AR G+GSKR RAAEVHNL
Sbjct: 269  SAERPSDDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNL 328

Query: 410  SERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQM 589
            SERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAG+ MP M
Sbjct: 329  SERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSM 388

Query: 590  MFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-PIFPVPPLQAPHFPSSM- 763
            M P GM HMH AH+  F P                       P++ V P+   HFP S  
Sbjct: 389  MLPPGMPHMHAAHMGQFLPMGVGMGMGFRMGMPDMNGGYSGCPMYQVSPMHGAHFPGSPM 448

Query: 764  --PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMN 937
              P+    M GP+L ++G  GQGLP S PR P +P++G PP        NA     P+ N
Sbjct: 449  SGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLMPMSGGPP-PKTNREPNACGVVGPMDN 507

Query: 938  --------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAGAS 1093
                    S D + + +SQ+  N  A  S+NQ ++Q QATNE   Q A  Q N + +  +
Sbjct: 508  LDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQNNGEGSEVA 567

Query: 1094 GPATLTSTTSTDI--SKEPGFD 1153
                L S   TDI  S+  G D
Sbjct: 568  ESGVLKSAGGTDIIPSRATGCD 589


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]
          Length = 713

 Score =  283 bits (724), Expect = 1e-73
 Identities = 171/356 (48%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
 Frame = +2

Query: 65   KDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDR 244
            ++ C  +++E   QE + K+D +        + +  P GE+ VEP+            +R
Sbjct: 349  EEPCTAKQSEGTCQEETSKDDINSNHIPCESAVRVSPNGEKTVEPVVASSVCSGNSV-ER 407

Query: 245  VSCEQTHNSKRKFRDTEESECRSDDIETESVGVKKTTHARGSGSKRSRAAEVHNLSERRR 424
             S + T   KRKFR+T+ESEC SDD+E E +GVKK  HARG GSKRSRAAEVHNLSERRR
Sbjct: 408  GSDDPTQALKRKFRETDESECHSDDVEEEYMGVKKGDHARGMGSKRSRAAEVHNLSERRR 467

Query: 425  RDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTG 604
            RDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQ+MSMGAG+ MP MM P G
Sbjct: 468  RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGMYMPPMMLPPG 527

Query: 605  MQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-------PIFPVPPLQAPHFPSSM 763
            MQHMH   + HFSP                             P+  VPP+Q  HFP S 
Sbjct: 528  MQHMHGPCMAHFSPMGVGMGMGMGLGMGFGMGMPDMNGASSSYPMLQVPPMQGAHFPGSH 587

Query: 764  ---PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIM 934
                T F  M G NL ++G P QG+P  + R P  P +  P V S+ G  NA  S  P+ 
Sbjct: 588  MAGHTAFNGMMGSNLQMFGLPSQGVPVPMQRAPLAPSSAGPFVKSSAGL-NAGSSGGPVE 646

Query: 935  N--------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQ 1078
            N        S D + + +SQ   N+ A SS+NQ ++Q QATNE   QSA  + N Q
Sbjct: 647  NVESAPVSGSKDSVQNMNSQAMQNSNANSSMNQTSSQGQATNEGFGQSALVRNNVQ 702


>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus trichocarpa]
            gi|550337605|gb|ERP60050.1| Phytochrome-interacting
            factor 3 family protein [Populus trichocarpa]
          Length = 742

 Score =  280 bits (715), Expect = 1e-72
 Identities = 172/374 (45%), Positives = 207/374 (55%), Gaps = 23/374 (6%)
 Frame = +2

Query: 77   PPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCE 256
            P E  E    E   K+D++   +    + KGV   E+  EP+            +R S +
Sbjct: 362  PAELPEATIPEGDSKSDRNCRQNFCESAIKGVADVEKTKEPVVASSSVGSDNSVERASDD 421

Query: 257  QTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNLSERRRRDR 433
             T N KRK RDTEESE  S+D+E ESVG KK   AR G+GSKR+RAAEVHNLSERRRRDR
Sbjct: 422  PTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDR 481

Query: 434  INEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQH 613
            INEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM P GM H
Sbjct: 482  INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPH 541

Query: 614  MHPAHIPHFSP-------XXXXXXXXXXXXXXXXXXXXXSPIFPVPPLQAPHF---PSSM 763
            MH AH+  F P                             P++ VPP+  PHF   P S 
Sbjct: 542  MHAAHMGQFLPMGVGMGMRMGMGMGFGMSMPDVNGGSSGCPMYQVPPMHGPHFSGQPMSG 601

Query: 764  PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG 943
             +   RM G NL ++G  GQG P S P  P VP++G PP+ +     N  P+   ++ + 
Sbjct: 602  LSALHRMGGSNLQMFGLSGQGFPMSFPCAPLVPMSGGPPLKT-----NMEPNACGVVGAT 656

Query: 944  DPLTSG------------SSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAG 1087
            D L S             +SQ+  N    SS+NQ ++Q QATNE   Q A  Q N Q +G
Sbjct: 657  DNLDSATACSSHEAIQKINSQVMQNNVVNSSMNQTSSQCQATNECFEQPALVQNNAQDSG 716

Query: 1088 ASGPATLTSTTSTD 1129
             +    L S    D
Sbjct: 717  VADNRALKSVGGND 730


>ref|XP_002330047.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  280 bits (715), Expect = 1e-72
 Identities = 172/374 (45%), Positives = 207/374 (55%), Gaps = 23/374 (6%)
 Frame = +2

Query: 77   PPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXXXXXXXXXXDRVSCE 256
            P E  E    E   K+D++   +    + KGV   E+  EP+            +R S +
Sbjct: 353  PAELPEATIPEGDSKSDRNCRQNFCESAIKGVADVEKTKEPVVASSSVGSDNSVERASDD 412

Query: 257  QTHNSKRKFRDTEESECRSDDIETESVGVKKTTHAR-GSGSKRSRAAEVHNLSERRRRDR 433
             T N KRK RDTEESE  S+D+E ESVG KK   AR G+GSKR+RAAEVHNLSERRRRDR
Sbjct: 413  PTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDR 472

Query: 434  INEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMFPTGMQH 613
            INEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MP MM P GM H
Sbjct: 473  INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPH 532

Query: 614  MHPAHIPHFSP-------XXXXXXXXXXXXXXXXXXXXXSPIFPVPPLQAPHF---PSSM 763
            MH AH+  F P                             P++ VPP+  PHF   P S 
Sbjct: 533  MHAAHMGQFLPMGVGMGMRMGMGMGFGMSMPDVNGGSSGCPMYQVPPMHGPHFSGQPMSG 592

Query: 764  PTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTSPIMNSG 943
             +   RM G NL ++G  GQG P S P  P VP++G PP+ +     N  P+   ++ + 
Sbjct: 593  LSALHRMGGSNLQMFGLSGQGFPMSFPCAPLVPMSGGPPLKT-----NMEPNACGVVGAT 647

Query: 944  DPLTSG------------SSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQPAG 1087
            D L S             +SQ+  N    SS+NQ ++Q QATNE   Q A  Q N Q +G
Sbjct: 648  DNLDSATACSSHEAIQKINSQVMQNNVVNSSMNQTSSQCQATNECFEQPALVQNNAQDSG 707

Query: 1088 ASGPATLTSTTSTD 1129
             +    L S    D
Sbjct: 708  VADNRALKSVGGND 721


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
            gi|567862616|ref|XP_006423962.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
            factor PIF3-like [Citrus sinensis]
            gi|557525895|gb|ESR37201.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|557525896|gb|ESR37202.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score =  279 bits (713), Expect = 2e-72
 Identities = 175/389 (44%), Positives = 220/389 (56%), Gaps = 17/389 (4%)
 Frame = +2

Query: 35   NSRQPVVNAHKDSCPPERTENLGQEMSVKNDKSLIISNTADSTKGVPYGERVVEPMXXXX 214
            +S QPV    + +C         +E ++ NDK     +   +TKGV   E+ VEP+    
Sbjct: 354  SSEQPVSEPPEAAC---------REDALNNDKKPSQVHAESATKGVVESEKTVEPVVAAS 404

Query: 215  XXXXXXXXDRVSCEQTHNSKRKFRDTEESECRSD--DIETESVGVKKTTHAR-GSGSKRS 385
                    +R S +  HN KRK  D ++SEC S+  D+E ESVGVKK    R G+GSKRS
Sbjct: 405  SVCSGNSVERASDDLPHNVKRKHCDLDDSECPSEEQDVEEESVGVKKQVPGRVGTGSKRS 464

Query: 386  RAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMG 565
            RAAEVHNLSERRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMG
Sbjct: 465  RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG 524

Query: 566  AGLCMPQMMFPTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXSPIFP---VPPL 736
            AG  MP MM+P+GMQHMH AH+ HF P                     S  +P   VP +
Sbjct: 525  AGFYMPPMMYPSGMQHMHAAHMAHFPPMGIGMGMGIGYGMGMPDINGGSSCYPMVQVPAM 584

Query: 737  QAPHFPS---SMPTNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSH- 904
               HFP    S P+  Q M G N  + G P QG   S+P  P  PL+G P + SAMG + 
Sbjct: 585  HGAHFPGTSVSGPSALQGMAGSNFQLLGLPAQGHHMSMPHAPLNPLSGGPIMKSAMGLNP 644

Query: 905  ----NAVPSTSPI--MNSGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQ 1066
                 ++ +T       S D + + +SQ+K N  A   ++Q + Q +ATNE   + AA Q
Sbjct: 645  TGMVGSMDNTDAAKGSTSKDLVQNVNSQVKQNTGAKGPVDQASGQCEATNESSAEPAAVQ 704

Query: 1067 ENKQPAGASGPATLTSTTSTD-ISKEPGF 1150
            +N Q +  +G  T  S+   +  S  P F
Sbjct: 705  DNCQASEVNGLVTYNSSRKNENESSNPAF 733


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
            vesca]
          Length = 710

 Score =  275 bits (702), Expect = 3e-71
 Identities = 164/316 (51%), Positives = 192/316 (60%), Gaps = 19/316 (6%)
 Frame = +2

Query: 239  DRVSCEQTHNSKRKFRDTEESECRSDDIETESVGVKK-TTHARGSGSKRSRAAEVHNLSE 415
            ++ S + T   KRK RDT++SEC S+D+E ESVGVKK   H RG+GSKRSRAAEVHNLSE
Sbjct: 388  EKASDDPTRVLKRKSRDTDDSECHSEDVEEESVGVKKKVAHGRGTGSKRSRAAEVHNLSE 447

Query: 416  RRRRDRINEKMRALQELIPNCNKADKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPQMMF 595
            RRRRDRINEKMRALQELIPNCNK DKASMLDEAIEYLKTLQLQVQIMSMGAGL MPQMM 
Sbjct: 448  RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPQMML 507

Query: 596  PTGMQHMHPAHIPHFSPXXXXXXXXXXXXXXXXXXXXXS-------PIFPVPPLQAPHFP 754
            P GMQHMH  H+ HFS                              P+  VPP+Q  HFP
Sbjct: 508  PPGMQHMHAPHMAHFSHMGMGMGMGMGLGMGFGMGLPDMNGGSSGYPMLQVPPMQGAHFP 567

Query: 755  SSMP---TNFQRMPGPNLPVYGHPGQGLPNSVPRTPFVPLTGQPPVTSAMGSHNAVPSTS 925
             S     T F  M G NL ++G PGQG+   + R P VP++G   + SA+G  NA  +  
Sbjct: 568  GSPMSGHTAFNGMIGSNLQMFGLPGQGVSMPMQRPPLVPISGGSFMKSAIGP-NACGAGG 626

Query: 926  PIMN--------SGDPLTSGSSQLKGNAEAGSSINQKTNQLQATNEVLNQSAATQENKQP 1081
            P+ N        S D + + +SQ+  N    SS+NQ +N  QATNE   QSA  Q+N Q 
Sbjct: 627  PVENMEPAPGTSSKDSVQNMNSQIMQNINTSSSMNQTSN--QATNEGFGQSALVQKNVQA 684

Query: 1082 AGASGPATLTSTTSTD 1129
               S      ST   D
Sbjct: 685  LDVSTSRANRSTNGKD 700