BLASTX nr result
ID: Rehmannia24_contig00005378
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00005378
(547 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 54 6e-14
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub... 51 3e-09
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1... 46 5e-08
gb|AFK36314.1| unknown [Lotus japonicus] 46 2e-07
gb|ABD83325.1| Fgenesh protein 114 [Beta vulgaris] 40 1e-06
ref|XP_003606360.1| hypothetical protein MTR_4g058660 [Medicago ... 57 4e-06
ref|XP_003606164.1| hypothetical protein MTR_4g053890 [Medicago ... 57 4e-06
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula] 57 4e-06
ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago ... 56 5e-06
ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago ... 56 5e-06
ref|XP_003599284.1| Helicase-like protein [Medicago truncatula] ... 56 6e-06
ref|XP_003592895.1| hypothetical protein MTR_2g005490 [Medicago ... 56 6e-06
ref|XP_003589361.1| hypothetical protein MTR_1g023370 [Medicago ... 56 6e-06
ref|XP_003593064.1| hypothetical protein MTR_2g007410 [Medicago ... 56 6e-06
gb|ABE91948.1| Ribosomal protein S2; Nucleic acid-binding, OB-fo... 56 6e-06
gb|ESW33924.1| hypothetical protein PHAVU_001G109800g [Phaseolus... 43 7e-06
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 53.5 bits (127), Expect(2) = 6e-14
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G+ +H I + V+K+ ++LK ++Y+++NF+V +N YKT+ KY + F KT + E
Sbjct: 50 EGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRE 109
Query: 489 IFDESFP-HM 515
+ D FP HM
Sbjct: 110 LKDIVFPSHM 119
Score = 49.3 bits (116), Expect(2) = 6e-14
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +2
Query: 83 MAPLFSLVKDINSSKVEWAMKLRLVRAYHLPSFSNSADVYSMECIFHDME 232
MAPL+ L +DI+ A+K+RL+R+Y +P +A + ECIFHD E
Sbjct: 1 MAPLYILGRDISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFHDKE 50
>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355484558|gb|AES65761.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 549
Score = 50.8 bits (120), Expect(2) = 3e-09
Identities = 23/71 (32%), Positives = 45/71 (63%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R++A+++R + K++ L+E+R++++ NF V +N+ Y+T YKI F T++ +
Sbjct: 50 KGDRINASVRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQ 109
Query: 489 IFDESFPHMIY 521
D+ P IY
Sbjct: 110 CDDKFVPADIY 120
Score = 36.2 bits (82), Expect(2) = 3e-09
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 83 MAPLFSLVKDINSSKVEWAMKLRLVRAYHLPSFSNSADVYSMECIFHD 226
MAP L+ DI+ SK W +++R+VR + + YS+E + D
Sbjct: 1 MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMD 48
>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
[Beta vulgaris subsp. vulgaris]
Length = 2037
Score = 45.8 bits (107), Expect(2) = 5e-08
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G ++ A +K+ + +F +L E +L + NF V N Y+ T YKI F+ T++
Sbjct: 81 KGDKIQAIVKKLLIRRFSHLLAEGQLRVINNFGVAQNNGSYRLTSHPYKINFLLNTRVQN 140
Query: 489 IFDESFPHMIYDFKSFD 539
D P +F SFD
Sbjct: 141 CDDLPIPLHGLNFASFD 157
Score = 37.0 bits (84), Expect(2) = 5e-08
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 53 HSKEIQHSEEMAPLFSLVKDINSSKVEWAMKLRLVRAYHLPSFSNSADVYSMECIF 220
H + + M V DI K W +K+R++R + PSF+N + S+E +F
Sbjct: 22 HHSQTSNPRSMNQEHHFVGDITPIKDSWNIKIRIIRLWKTPSFANPTEDGSIEMVF 77
>gb|AFK36314.1| unknown [Lotus japonicus]
Length = 242
Score = 46.2 bits (108), Expect(2) = 2e-07
Identities = 23/75 (30%), Positives = 43/75 (57%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G ++HA++++ V +F +L E R+Y + F V +N+ ++TT ++KI F T++ E
Sbjct: 50 KGCQIHASVRKTLVYRFHPLLTEGRVYQISYFGVGDNLGDFRTTTHQFKINFHIHTKVKE 109
Query: 489 IFDESFPHMIYDFKS 533
I + Y F S
Sbjct: 110 IGNCPITKSPYSFIS 124
Score = 34.3 bits (77), Expect(2) = 2e-07
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 104 VKDINSSKVEWAMKLRLVRAYHLPSFSNSADVYSMECIFHD 226
V D+N+SK W + ++VR + PSFS +SME + D
Sbjct: 8 VSDVNNSKDTWNIVTKVVRLWVSPSFSGGKLPFSMELVLMD 48
>gb|ABD83325.1| Fgenesh protein 114 [Beta vulgaris]
Length = 119
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G ++ A++K++ V +F +L E + + NF V N Y+ T YKI F ++ L
Sbjct: 50 KGDKIQASVKKFLVRRFSHLLDEGQCRVISNFGVGENSGSYRPTSHPYKINFFSQLGLKN 109
Query: 489 I 491
+
Sbjct: 110 V 110
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 83 MAPLFSLVKDINSSKVEWAMKLRLVRAYHLPSFSNSADVYSMECIFHD 226
MA + + IN K W++K+R+VR + PSF+N + S+E IF D
Sbjct: 1 MAQGYDCIGAINPIKDSWSIKIRIVRLWKTPSFANPNEDGSIEMIFLD 48
>ref|XP_003606360.1| hypothetical protein MTR_4g058660 [Medicago truncatula]
gi|355507415|gb|AES88557.1| hypothetical protein
MTR_4g058660 [Medicago truncatula]
Length = 326
Score = 56.6 bits (135), Expect = 4e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 50 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 109
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 110 VHSLAIPMNVFEFKPFN 126
>ref|XP_003606164.1| hypothetical protein MTR_4g053890 [Medicago truncatula]
gi|355507219|gb|AES88361.1| hypothetical protein
MTR_4g053890 [Medicago truncatula]
Length = 359
Score = 56.6 bits (135), Expect = 4e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 34 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 93
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 94 VHSLAIPMNVFEFKPFN 110
>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
Length = 327
Score = 56.6 bits (135), Expect = 4e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 51 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 110
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 111 VHSLAIPMNVFEFKPFN 127
>ref|XP_003638595.1| hypothetical protein MTR_137s0043 [Medicago truncatula]
gi|355504530|gb|AES85733.1| hypothetical protein
MTR_137s0043 [Medicago truncatula]
Length = 372
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/77 (32%), Positives = 47/77 (61%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N MV N YK T K+K++ + + T+
Sbjct: 31 KGGRIHATCRKDLVAKFRSMVQEGGAYQLENAMVGFNESPYKVTSHKHKLSMMHNSTFTK 90
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 91 VHSPAIPMNVFEFKPFN 107
>ref|XP_003593327.1| hypothetical protein MTR_2g010270 [Medicago truncatula]
gi|355482375|gb|AES63578.1| hypothetical protein
MTR_2g010270 [Medicago truncatula]
Length = 315
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/77 (32%), Positives = 47/77 (61%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N MV N YK T K+K++ + + T+
Sbjct: 31 KGGRIHATSRKDLVAKFRSMVQEGGTYQLENAMVGFNESPYKVTSHKHKLSMMHNSNFTK 90
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 91 VHSPAIPMNVFEFKPFN 107
>ref|XP_003599284.1| Helicase-like protein [Medicago truncatula]
gi|355488332|gb|AES69535.1| Helicase-like protein
[Medicago truncatula]
Length = 486
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 50 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 109
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 110 VHLPAIPMNVFEFKPFN 126
>ref|XP_003592895.1| hypothetical protein MTR_2g005490 [Medicago truncatula]
gi|357446155|ref|XP_003593355.1| hypothetical protein
MTR_2g010570 [Medicago truncatula]
gi|357488661|ref|XP_003614618.1| hypothetical protein
MTR_5g056270 [Medicago truncatula]
gi|357488663|ref|XP_003614619.1| hypothetical protein
MTR_5g056290 [Medicago truncatula]
gi|357492441|ref|XP_003616509.1| hypothetical protein
MTR_5g081190 [Medicago truncatula]
gi|357494283|ref|XP_003617430.1| hypothetical protein
MTR_5g091480 [Medicago truncatula]
gi|357500661|ref|XP_003620619.1| hypothetical protein
MTR_6g087820 [Medicago truncatula]
gi|357503105|ref|XP_003621841.1| hypothetical protein
MTR_7g024060 [Medicago truncatula]
gi|355481943|gb|AES63146.1| hypothetical protein
MTR_2g005490 [Medicago truncatula]
gi|355482403|gb|AES63606.1| hypothetical protein
MTR_2g010570 [Medicago truncatula]
gi|355495634|gb|AES76837.1| hypothetical protein
MTR_6g087820 [Medicago truncatula]
gi|355496856|gb|AES78059.1| hypothetical protein
MTR_7g024060 [Medicago truncatula]
gi|355515953|gb|AES97576.1| hypothetical protein
MTR_5g056270 [Medicago truncatula]
gi|355515954|gb|AES97577.1| hypothetical protein
MTR_5g056290 [Medicago truncatula]
gi|355517844|gb|AES99467.1| hypothetical protein
MTR_5g081190 [Medicago truncatula]
gi|355518765|gb|AET00389.1| hypothetical protein
MTR_5g091480 [Medicago truncatula]
Length = 326
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 50 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 109
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 110 VHLPAIPMNVFEFKPFN 126
>ref|XP_003589361.1| hypothetical protein MTR_1g023370 [Medicago truncatula]
gi|355478409|gb|AES59612.1| hypothetical protein
MTR_1g023370 [Medicago truncatula]
Length = 307
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 50 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 109
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 110 VHLPAIPMNVFEFKPFN 126
>ref|XP_003593064.1| hypothetical protein MTR_2g007410 [Medicago truncatula]
gi|357485191|ref|XP_003612883.1| hypothetical protein
MTR_5g030110 [Medicago truncatula]
gi|355482112|gb|AES63315.1| hypothetical protein
MTR_2g007410 [Medicago truncatula]
gi|355514218|gb|AES95841.1| hypothetical protein
MTR_5g030110 [Medicago truncatula]
Length = 326
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 50 KGGRIHATTRKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 109
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 110 VHLPAIPMNVFEFKPFN 126
>gb|ABE91948.1| Ribosomal protein S2; Nucleic acid-binding, OB-fold [Medicago
truncatula]
Length = 327
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/77 (32%), Positives = 48/77 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLTE 488
+G R+HAT ++ V KF+S+++E Y ++N +VD N YK T K+K++ + + T+
Sbjct: 51 KGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKLSMMHNSTFTK 110
Query: 489 IFDESFPHMIYDFKSFD 539
+ + P +++FK F+
Sbjct: 111 VHLPAIPMNVFEFKPFN 127
>gb|ESW33924.1| hypothetical protein PHAVU_001G109800g [Phaseolus vulgaris]
Length = 472
Score = 42.7 bits (99), Expect(2) = 7e-06
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +3
Query: 309 QGSRVHATIKRWQVDKFKSILKENRLYAVKNFMVDNNIMKYKTTVGKYKIAFVAKTQLT 485
+G R+H ++++ + KF++ + E+++Y+ F V N Y+TT KYKI F T+++
Sbjct: 53 EGDRIHVSVRKTLIYKFQNHIFEDKVYSFNFFSVATNSGSYRTTRHKYKINFQFGTKVS 111
Score = 32.7 bits (73), Expect(2) = 7e-06
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 104 VKDINSSKVEWAMKLRLVRAYHLPSFSNSADVYSMECIFHDME 232
+KDIN W + R++R + + F + +SME + D E
Sbjct: 11 IKDINPESENWILIARVIRLWFVSDFKKNKFPFSMEMVIQDKE 53