BLASTX nr result

ID: Rehmannia24_contig00005320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00005320
         (1430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361683.1| PREDICTED: lysine-specific histone demethyla...    64   2e-07
emb|CBI31420.3| unnamed protein product [Vitis vinifera]               62   5e-07
ref|XP_002273083.1| PREDICTED: lysine-specific histone demethyla...    62   5e-07

>ref|XP_006361683.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
            [Solanum tuberosum]
          Length = 996

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
 Frame = +3

Query: 3    LGVKLIGRKGLGPSADSVIASIKXXXXXXXXXXXXXXXXXXXXXXXXTKPKLVRKAKIIR 182
            LGVKL+GRKGLGPS DS+IAS+K                         K K+VRKAK++ 
Sbjct: 793  LGVKLVGRKGLGPSVDSIIASVK--AERGRRKPGTLKSGVMKSKDTTLKRKIVRKAKVVS 850

Query: 183  NSNR-FSIPSTN-----IGSKVSS---SGNDVESR------TLASSNDSISLGSDIGVRA 317
              NR  S P+++     +GS  ++   +  D+E +      ++AS + +I +  D+G ++
Sbjct: 851  GGNRTTSSPASSSRIKAVGSSTTTIHLTNVDLEPKPVCAIGSVASPSLNIRVNDDMGSKS 910

Query: 318  FSSNTDLPTTTPDNGADFVGDIGCSIPQ--NLGHNNGLTAPFGSNIASTTSCSNNSLAPP 491
              S+  L       G  F G+ G S     N+G N G  +     + ST   S ++ APP
Sbjct: 911  VGSSVHL-LHNASIGDKFEGNFGSSAAPLLNVGGNTGSNSDGPIYLRSTYDDSTDTFAPP 969


>emb|CBI31420.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
 Frame = +3

Query: 3    LGVKLIGRKGLGPSADSVIASIK-XXXXXXXXXXXXXXXXXXXXXXXXTKPKLVRKAKII 179
            LGVKL+ RKGLGPSADSVIASIK                         +K K+VRKAK++
Sbjct: 731  LGVKLVARKGLGPSADSVIASIKAERGNRKPASTSLALKSGMKPKAAGSKRKVVRKAKVV 790

Query: 180  RNSNRFSIPSTNIGSKVSSSGNDVESRTLASSNDSISLGSDIGVRAFSSNTDLPTTTPDN 359
                      +N+G  +  + N      + + N SI   S++ VR  S +T  P     N
Sbjct: 791  ----------SNVGGLMPRNSN------MRNGNSSIP-PSNLIVRNGSGSTPPPNLNMGN 833

Query: 360  GADFV-------GDIGCSIP-QNLGHNNGLTAPFGSNIASTTSC--------SNNSLAPP 491
            G+  V       G+    +P  NL   +GL  P   +I + +          +N S  PP
Sbjct: 834  GSGLVPRPNLNMGNGSGLVPSSNLNMTSGLLPPSNLSIGNGSGFTPAILNMGNNGSSVPP 893

Query: 492  DLNVG 506
            DLN+G
Sbjct: 894  DLNIG 898


>ref|XP_002273083.1| PREDICTED: lysine-specific histone demethylase 1 homolog 3-like
            [Vitis vinifera]
          Length = 992

 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
 Frame = +3

Query: 3    LGVKLIGRKGLGPSADSVIASIK-XXXXXXXXXXXXXXXXXXXXXXXXTKPKLVRKAKII 179
            LGVKL+ RKGLGPSADSVIASIK                         +K K+VRKAK++
Sbjct: 789  LGVKLVARKGLGPSADSVIASIKAERGNRKPASTSLALKSGMKPKAAGSKRKVVRKAKVV 848

Query: 180  RNSNRFSIPSTNIGSKVSSSGNDVESRTLASSNDSISLGSDIGVRAFSSNTDLPTTTPDN 359
                      +N+G  +  + N      + + N SI   S++ VR  S +T  P     N
Sbjct: 849  ----------SNVGGLMPRNSN------MRNGNSSIP-PSNLIVRNGSGSTPPPNLNMGN 891

Query: 360  GADFV-------GDIGCSIP-QNLGHNNGLTAPFGSNIASTTSC--------SNNSLAPP 491
            G+  V       G+    +P  NL   +GL  P   +I + +          +N S  PP
Sbjct: 892  GSGLVPRPNLNMGNGSGLVPSSNLNMTSGLLPPSNLSIGNGSGFTPAILNMGNNGSSVPP 951

Query: 492  DLNVG 506
            DLN+G
Sbjct: 952  DLNIG 956


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