BLASTX nr result
ID: Rehmannia24_contig00005307
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00005307
(367 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004247589.1| PREDICTED: 40S ribosomal protein S3a-like [S... 60 4e-07
ref|NP_001275164.1| 40S ribosomal protein S3a-like protein [Sola... 60 4e-07
gb|EPS71864.1| hypothetical protein M569_02887, partial [Genlise... 59 7e-07
ref|XP_006298355.1| hypothetical protein CARUB_v10014425mg [Caps... 58 1e-06
gb|EPS57495.1| hypothetical protein M569_17323, partial [Genlise... 58 1e-06
ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, p... 57 2e-06
ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [C... 57 2e-06
gb|AAX55706.1| cyc07 [Vitis vinifera] 57 2e-06
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti... 57 2e-06
sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a g... 57 3e-06
sp|P49396.2|RS3A_BRACM RecName: Full=40S ribosomal protein S3a; ... 57 3e-06
ref|XP_006284351.1| hypothetical protein CARUB_v10005523mg [Caps... 57 3e-06
sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; ... 57 3e-06
ref|NP_001276152.1| 40S ribosomal protein S3a-like [Glycine max]... 56 4e-06
ref|NP_001241430.1| uncharacterized protein LOC100813273 [Glycin... 56 4e-06
ref|XP_006420004.1| hypothetical protein CICLE_v10005663mg [Citr... 56 6e-06
ref|XP_003638197.1| 40S ribosomal protein S3a [Medicago truncatu... 56 6e-06
ref|XP_003638196.1| 40S ribosomal protein S3a [Medicago truncatu... 56 6e-06
gb|ACJ85751.1| unknown [Medicago truncatula] gi|388492750|gb|AFK... 56 6e-06
gb|ESW15294.1| hypothetical protein PHAVU_007G060700g [Phaseolus... 55 7e-06
>ref|XP_004247589.1| PREDICTED: 40S ribosomal protein S3a-like [Solanum lycopersicum]
Length = 260
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVGVKV+RPAE+ EPTEVVGA
Sbjct: 228 LMEVHGDYSEDVGVKVDRPAEDIATEPTEVVGA 260
>ref|NP_001275164.1| 40S ribosomal protein S3a-like protein [Solanum tuberosum]
gi|82400124|gb|ABB72801.1| 40S ribosomal protein
S3a-like protein [Solanum tuberosum]
Length = 260
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVGVKV+RPAE+ EPTEVVGA
Sbjct: 228 LMEVHGDYSEDVGVKVDRPAEDVATEPTEVVGA 260
>gb|EPS71864.1| hypothetical protein M569_02887, partial [Genlisea aurea]
Length = 266
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVG K+ERPAEES AEP EV GA
Sbjct: 234 LMEVHGDYSEDVGTKLERPAEESTAEPVEVPGA 266
>ref|XP_006298355.1| hypothetical protein CARUB_v10014425mg [Capsella rubella]
gi|482567064|gb|EOA31253.1| hypothetical protein
CARUB_v10014425mg [Capsella rubella]
Length = 261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/34 (79%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYT-EDVGVKVERPAEESVAEPTEVVGA 267
LM+VHGDYT EDVGVKV+RPAEE+V EPTE++GA
Sbjct: 228 LMDVHGDYTAEDVGVKVDRPAEETVEEPTEIIGA 261
>gb|EPS57495.1| hypothetical protein M569_17323, partial [Genlisea aurea]
Length = 97
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVG K++RPAE++ EPTEV+GA
Sbjct: 65 LMEVHGDYSEDVGTKLDRPAEDAAVEPTEVIGA 97
>ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Cucumis
sativus]
Length = 208
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVGVKV+RPAEE+V TEVVGA
Sbjct: 176 LMEVHGDYSEDVGVKVDRPAEEAVEGATEVVGA 208
>ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449472057|ref|XP_004153483.1| PREDICTED: 40S
ribosomal protein S3a-like [Cucumis sativus]
Length = 260
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVGVKV+RPAEE+V TEVVGA
Sbjct: 228 LMEVHGDYSEDVGVKVDRPAEEAVEGATEVVGA 260
>gb|AAX55706.1| cyc07 [Vitis vinifera]
Length = 237
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAE-PTEVVGA 267
LMEVHGDY+EDVGVK+ERPAEE+VAE TEVVGA
Sbjct: 204 LMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 237
>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
Length = 261
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAE-PTEVVGA 267
LMEVHGDY+EDVGVK+ERPAEE+VAE TEVVGA
Sbjct: 228 LMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 261
>sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a gi|469248|gb|AAA80978.1|
ribosomal protein S3a [Helianthus annuus]
Length = 260
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY+EDVGVK++RPAEE+ E TEV+GA
Sbjct: 228 LMEVHGDYSEDVGVKLDRPAEEAAPEATEVIGA 260
>sp|P49396.2|RS3A_BRACM RecName: Full=40S ribosomal protein S3a; AltName: Full=S
phase-specific protein BIS289 gi|387909|gb|AAA33013.1|
S-phase-specific protein [Brassica rapa]
gi|397401|emb|CAA81030.1| unnamed protein product
[Brassica rapa]
Length = 262
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/34 (79%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYT-EDVGVKVERPAEESVAEPTEVVGA 267
LMEVHGDYT EDVGVKV+RPA+E V EPTE++GA
Sbjct: 229 LMEVHGDYTAEDVGVKVDRPADEVVEEPTEIIGA 262
>ref|XP_006284351.1| hypothetical protein CARUB_v10005523mg [Capsella rubella]
gi|482553056|gb|EOA17249.1| hypothetical protein
CARUB_v10005523mg [Capsella rubella]
Length = 262
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/35 (82%), Positives = 33/35 (94%), Gaps = 2/35 (5%)
Frame = -3
Query: 365 LMEVHGDYT-EDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDYT EDVGVKV+RPAEE+VA EPTE++GA
Sbjct: 228 LMEVHGDYTAEDVGVKVDRPAEETVAEEPTEIIGA 262
>sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
protein
Length = 261
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/34 (76%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTED-VGVKVERPAEESVAEPTEVVGA 267
LMEVHGDY ED +G K++RPAEE+VAEPTEV+GA
Sbjct: 228 LMEVHGDYNEDDIGTKLDRPAEEAVAEPTEVIGA 261
>ref|NP_001276152.1| 40S ribosomal protein S3a-like [Glycine max]
gi|255642692|gb|ACU22108.1| unknown [Glycine max]
Length = 261
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/34 (79%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDY+EDVG KV+RPA+E VA EPTE+VGA
Sbjct: 228 LMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVGA 261
>ref|NP_001241430.1| uncharacterized protein LOC100813273 [Glycine max]
gi|255642505|gb|ACU21516.1| unknown [Glycine max]
Length = 261
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/34 (79%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDY+EDVG KV+RPA+E VA EPTE+VGA
Sbjct: 228 LMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVGA 261
>ref|XP_006420004.1| hypothetical protein CICLE_v10005663mg [Citrus clementina]
gi|568872572|ref|XP_006489441.1| PREDICTED: 40S
ribosomal protein S3a-like [Citrus sinensis]
gi|557521877|gb|ESR33244.1| hypothetical protein
CICLE_v10005663mg [Citrus clementina]
Length = 261
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/34 (76%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVAE-PTEVVGA 267
LMEVHGDY+EDVGVK+ERPA+E + E PTEV+GA
Sbjct: 228 LMEVHGDYSEDVGVKMERPADEPIPEAPTEVIGA 261
>ref|XP_003638197.1| 40S ribosomal protein S3a [Medicago truncatula]
gi|355504132|gb|AES85335.1| 40S ribosomal protein S3a
[Medicago truncatula]
Length = 159
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/34 (79%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDY EDVG KVERPA+E V EPTE+VGA
Sbjct: 126 LMEVHGDYNEDVGTKVERPADEMVTEEPTEIVGA 159
>ref|XP_003638196.1| 40S ribosomal protein S3a [Medicago truncatula]
gi|355504131|gb|AES85334.1| 40S ribosomal protein S3a
[Medicago truncatula]
Length = 244
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/34 (79%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDY EDVG KVERPA+E V EPTE+VGA
Sbjct: 211 LMEVHGDYNEDVGTKVERPADEMVTEEPTEIVGA 244
>gb|ACJ85751.1| unknown [Medicago truncatula] gi|388492750|gb|AFK34441.1| unknown
[Medicago truncatula]
Length = 261
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/34 (79%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDY EDVG KVERPA+E V EPTE+VGA
Sbjct: 228 LMEVHGDYNEDVGTKVERPADEMVTEEPTEIVGA 261
>gb|ESW15294.1| hypothetical protein PHAVU_007G060700g [Phaseolus vulgaris]
Length = 261
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/34 (76%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Frame = -3
Query: 365 LMEVHGDYTEDVGVKVERPAEESVA-EPTEVVGA 267
LMEVHGDY+EDVG KV+RP EE+ A EPTE+VGA
Sbjct: 228 LMEVHGDYSEDVGTKVDRPVEETTAEEPTEIVGA 261