BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00004014
         (3236 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                              1090   0.0  
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...  1066   0.0  
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   811   0.0  
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   795   0.0  
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       792   0.0  
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   789   0.0  
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   788   0.0  
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   685   0.0  
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         663   0.0  
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir...   643   0.0  
emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-dir...   639   e-180
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   626   e-176
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   536   e-149
gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   513   e-142
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      486   e-134
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta...   473   e-130
ref|XP_005753688.1| PREDICTED: RNA-directed DNA polymerase from ...   461   e-126
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   458   e-126
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   452   e-124
emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcripta...   429   e-117

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 1090 bits (2819), Expect = 0.0
 Identities = 562/1052 (53%), Positives = 709/1052 (67%), Gaps = 39/1052 (3%)
 Frame = -1

Query: 3146 MDHIRHRDKARMLPVRSAPQGP-TAVSWQGPLHLHKGLGVVKNTQEPSHTNKRN------ 2988
            M+  ++R KAR  PV  A  GP T +S QG L+LH+    V N Q        N      
Sbjct: 1    MNPEQNRAKARASPVSGALCGPSTVISEQGSLYLHRHPDAVLNEQGGHRNFFSNDSTQSC 60

Query: 2987 ---------TNDNKK-----IR----------------KYRIGSWNIGTLTGKTIELVDI 2898
                     T D +K     IR                K R+G+WNIGTLTGK++E+V++
Sbjct: 61   LGAYAPINFTRDTQKKYFDPIRRGRVKKLGQKGRVQKSKMRLGTWNIGTLTGKSMEVVEV 120

Query: 2897 MKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTR 2718
            M RR I+IMC+QETKWVG KAK L+ +G+KLWYSG  RTRNGVGIIVD   +  VV V R
Sbjct: 121  MVRRRINIMCLQETKWVGSKAKDLENSGFKLWYSGTHRTRNGVGIIVDKTLVQDVVDVKR 180

Query: 2717 KGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDL 2538
             GDRI+++KIV+  ELIN++S YAPQVGLD ++K KFWEDL  L+Q I Q EK+ IGGDL
Sbjct: 181  VGDRIMAIKIVIRQELINVISAYAPQVGLDTSSKEKFWEDLGDLVQGIAQTEKLFIGGDL 240

Query: 2537 NGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGP 2358
            NGHVG++  +Y   HGG+GF  RN +G  ILDFA+AYD  + NTFFKKR+EH+IT+KSG 
Sbjct: 241  NGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYDLFLANTFFKKREEHVITYKSGS 300

Query: 2357 NKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKINIPRIKWW 2178
            +K+QID+ L RK DR  CK+CKVIPGES+  QHRLLV+D+ +  +  K K    PR +WW
Sbjct: 301  SKTQIDFLLMRKGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQKNKTWKCPRTRWW 360

Query: 2177 NLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNG-NKWNKESW 2001
            NLK  EK+  F + ++    W  E +A + W+ + + ++K+AKE LG S G     KESW
Sbjct: 361  NLKE-EKQAIFKEKVITQCVWDREGEASQMWDSMASCIRKVAKEVLGESKGFAPHQKESW 419

Query: 2000 WWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYEDFYKKLDT 1821
            WWN+E+Q KVK K+   K LY  + +EN +RY+ AK+E ++A+ EAK  AY+D YK+LDT
Sbjct: 420  WWNEEVQTKVKAKKECCKALYKDRTDENGERYRKAKQEAKKAVREAKLAAYDDMYKRLDT 479

Query: 1820 KEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLFNEPKRNE 1641
            KEGE DIYK+A+ REK+TRDL Q++CIKDE+  +L  +  +KDRWR YF+NLFNE     
Sbjct: 480  KEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFNEGHERS 539

Query: 1640 VTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLGGVGISWL 1461
             +L EL  SE  RN +FYRRI+  E   AL KMK  KA+G DDIPIE WK LG  GI+WL
Sbjct: 540  ASLWELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVLGETGITWL 599

Query: 1460 TKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIR 1281
            T LFN ILKTKKMP+EWR S L+PIYKNKGD+QNC NYRGIKL+SHTMKLWERVIE R+R
Sbjct: 600  TDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLR 659

Query: 1280 NETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWR 1101
             ET + DNQFGFMPGRST+EAI+L+RRL E+Y +                          
Sbjct: 660  QETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDG------------------------- 694

Query: 1100 VLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEI 921
               K+ + + +ID ++  YD      R P  I                           +
Sbjct: 695  ---KKDLHMVFID-LEKAYD------RVPRDI---------------------------L 717

Query: 920  TKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSK 741
             + L+K    CMLFADDIVLIDET+EGVNAKL +WRE LESKG  +SR+KTEYMEC FS 
Sbjct: 718  WRILEKK--GCMLFADDIVLIDETQEGVNAKLNLWREVLESKGLRLSRSKTEYMECKFSA 775

Query: 740  NNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDR 561
            N   NE  V+I   E+  +  F+YLGSI+++NGE++ D+ HRIQAGW KW+SAS +LCDR
Sbjct: 776  NGGQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDGDLNHRIQAGWMKWKSASGVLCDR 835

Query: 560  KIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEH 381
            ++PLKLKGKFY+TAIRPAMLYG ECWA K++H  KM VAEMRMLRWMCGHTR D+IRNE 
Sbjct: 836  RMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGHTRKDKIRNED 895

Query: 380  IRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLE-GRESLTQIKRGRGRPKKTWKE 204
            IR KVGVA I  K+RE +LRWFGHV RRP DAP+RR + G E   Q +RGRGRP+KT +E
Sbjct: 896  IRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGTE--VQGRRGRGRPRKTLEE 953

Query: 203  AIKHDMLYLEINENMAYDRKRWRDMIRIADPT 108
             ++ D+ YL++ ++M  DR +WR  I IADPT
Sbjct: 954  TLRKDLEYLDLTKDMTQDRAQWRSKIHIADPT 985


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 546/1026 (53%), Positives = 703/1026 (68%), Gaps = 17/1026 (1%)
 Frame = -1

Query: 3155 PYGMDHIRHRDKARMLPVRSAPQGPTAVSWQGPLHLHKGLGVVKNTQEPSHTNKRNTNDN 2976
            P+ M+   +  KAR LP  +AP G + VS Q PLH  +   VV N Q  S   +R T  N
Sbjct: 427  PHDMNQRHYCAKARSLPGSNAPYGSSTVSKQEPLH--RCPDVVLNEQGFSRFRER-TRVN 483

Query: 2975 KKI----------RKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTL 2826
            K +          R+ R G+WNIGTLTGK++E+VD M RR I+IMC+QETKWVG KA+ L
Sbjct: 484  KLVHKGKGKGRSDRRLRFGTWNIGTLTGKSMEVVDTMTRRKINIMCLQETKWVGAKAREL 543

Query: 2825 DTTGYKLWYSGKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYA 2646
            DT+G+KLWY+GK + RNGVGIIVD  +   VV V R GDRIIS+K+VV     +++S YA
Sbjct: 544  DTSGFKLWYTGKVKNRNGVGIIVDKQWKKDVVDVKRVGDRIISIKLVVEGGAFHVISAYA 603

Query: 2645 PQVGLDDATKAKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRN 2466
            PQVG D+  K  FWEDLE+L+Q IP  +K+ +GGDLNGHVG++   Y  +HGG+GF   N
Sbjct: 604  PQVGSDEQHKISFWEDLESLVQGIPLGDKIFLGGDLNGHVGREVTGYGSIHGGHGFGVIN 663

Query: 2465 NEGRTILDFAVAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVI 2286
             EG+TILDF+  +D +I NT FKKRDEHLIT+KSG   SQID+FL R+ DRK C NCK+I
Sbjct: 664  AEGKTILDFSSTFDLLIANTCFKKRDEHLITYKSGMTSSQIDFFLLRRVDRKFCINCKII 723

Query: 2285 PGESLTTQHRLLVLDIKLINIHLKRKKINIPRIKWWNLKNIEKRDSFVKSLVETIDWKVE 2106
            PGESLTTQHR+LVLD ++     KR     PR +WW +K  E+R SF++ + E   W   
Sbjct: 724  PGESLTTQHRVLVLDFRVEQKLRKRHHTKNPRTRWWRMKGEEQR-SFLRRVGEEAKWDGN 782

Query: 2105 DKADETWNYVTTQMKKIAKETLGVSNG-NKWNKESWWWNQEIQEKVKEKRTSYKVLYSCK 1929
              A+E W  +   +++ AKE+ G S G    +KESWWWN  IQEK+K KR  +K    C+
Sbjct: 783  GSAEEMWREMAEVIRRTAKESFGESKGIGPRDKESWWWNASIQEKIKIKRECFKEWSLCR 842

Query: 1928 NEENLKRYKDAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQI 1749
            N +N ++YK AKKE + A+ EA+T+AYE  Y+ LDTKEGEK IY+IAK RE++TRDL Q+
Sbjct: 843  NVDNWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKGIYRIAKSRERRTRDLDQV 902

Query: 1748 KCIKDENENILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLH 1569
            KCIKD++  +L ++E I +RW+ YF  LFNE ++   +LG L   E ++N  +YRRI+  
Sbjct: 903  KCIKDKDREVLAQEEKINERWKSYFYELFNEGQKTLPSLGRLCTREEDQNFNYYRRIRDF 962

Query: 1568 ETEKALNKMKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIP 1389
            E ++AL +MK G+AVG D+IPIE WK LGG GI+WLTKLF  IL++KKMPDEWRKS L+P
Sbjct: 963  EVKEALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVP 1022

Query: 1388 IYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHL 1209
            IY+ KGDIQ+C NYRGIKL+SHTMKLW +                     G  T      
Sbjct: 1023 IYRIKGDIQSCGNYRGIKLMSHTMKLWGK---------------------GDRT------ 1055

Query: 1208 IRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITT 1029
                                ++EK   R     +W+VLEKR ++IAYI AIKDMY+G TT
Sbjct: 1056 --------------------EVEKRDTRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATT 1095

Query: 1028 CIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDET 849
             ++T  G++ EFP  IGLHQGS+LSPYLF L+++ +T+H+Q+ +P CMLFADDIVL+ E+
Sbjct: 1096 SVKTQGGVTEEFPIGIGLHQGSSLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGES 1155

Query: 848  REGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKY 669
            RE +N KLE+WREALE  G  ISR+KTEYMEC FS    N+  +VKI  + +   KSFKY
Sbjct: 1156 REDLNKKLELWREALEVYGLRISRSKTEYMECKFSLRRENSNIEVKIGENILRKVKSFKY 1215

Query: 668  LGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAE 489
            LG II++NGEI +DV HRIQAGW+KWRSAS  +CD+K+PLKLKGKFY+TAIRPAMLYG E
Sbjct: 1216 LGCIIQDNGEIEQDVNHRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTE 1275

Query: 488  CWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGH 309
            CWA K EHE K+ VAEM+MLRWM GHTRLD+IRNE IR +VGVAPI EK+ E+RLRWFGH
Sbjct: 1276 CWAAKGEHEHKLSVAEMKMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKMVESRLRWFGH 1335

Query: 308  VYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDR------ 147
            V RRP++  VRR++  E   Q  +GRGRPKKT  E +K D+   E   ++   +      
Sbjct: 1336 VGRRPIEHLVRRVDEMED-GQKAKGRGRPKKTIHEVVKRDLHETEAIHSIVLHKVYRETE 1394

Query: 146  KRWRDM 129
             +WRD+
Sbjct: 1395 GKWRDL 1400


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  811 bits (2096), Expect = 0.0
 Identities = 408/958 (42%), Positives = 590/958 (61%), Gaps = 6/958 (0%)
 Frame = -1

Query: 2966 RKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKD 2787
            +K R  +WNIG+LTG+  EL D++ RR +    +QET+W G K++ +   GY+L Y+G  
Sbjct: 49   QKLRFATWNIGSLTGRCRELADVLMRRRVQCAFLQETRWKGNKSRNIGQ-GYRLIYTGSP 107

Query: 2786 RTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKF 2607
              RNGV +++     + ++ V R+ DR++ +++++   + N++S YAPQ G   + K  F
Sbjct: 108  SGRNGVAVVLSEELQNGLLEVDRRSDRLMRVRVLIEGVITNLISAYAPQAGCSASEKETF 167

Query: 2606 WEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAY 2427
            WE  E ++ ++P  E V++GGDLNGHVG+  E YERVHGG+G   RN EG  IL   +A 
Sbjct: 168  WEQYEGVLLAVPSTELVLVGGDLNGHVGRAAEPYERVHGGFGHGLRNAEGENILRTCIAS 227

Query: 2426 DFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLV 2247
            D  + NTFF+K  +HLIT+K G + +QIDY LTR+       NCKVIPGESLT QHRLLV
Sbjct: 228  DLAVVNTFFQKNSQHLITYKCGSHSTQIDYLLTRRCHMGRVTNCKVIPGESLTAQHRLLV 287

Query: 2246 LDIKLINIHLKRK--KINIPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVT 2073
            +D    N+  KRK  +   PRIKWW L    + D   +     +    E  A E W+   
Sbjct: 288  MDF---NVTPKRKVAEKRRPRIKWWLLNGPMQTDFLAEVKSHNLSTNTET-AQEAWDRAQ 343

Query: 2072 TQMKKIAKETLGVSNGNKW-NKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDA 1896
            + +    +  LGVS G +  +KE+WWWN E+QE  +EK+ ++K      + E+   Y  A
Sbjct: 344  SAIIAAGRRVLGVSRGGRVIDKETWWWNDEVQEVTREKKAAFKKWQESNSPEDRLEYTVA 403

Query: 1895 KKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENIL 1716
            K+  +RA+  A++++    Y KL+T EG+K IYK+A+ R+K T+D+ +  C++D    +L
Sbjct: 404  KRASKRAVARARSESLSPLYDKLETVEGQKLIYKLARSRDKVTQDIAKCLCVRDSQGTLL 463

Query: 1715 VKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKT 1536
               + +K+RWR YF  L N      +        +   N      I L ET   L +MK 
Sbjct: 464  CNHDSVKERWRSYFQELLNTQHPCSL------HHDPPPNLGLIAPITLDETRNCLRRMKN 517

Query: 1535 GKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNC 1356
            GKAVG DDIPIEAWK LG +G+  LT LFN IL T KMP +WR S + PIYK +G +Q+C
Sbjct: 518  GKAVGPDDIPIEAWKSLGSLGVLMLTDLFNHILNTGKMPHQWRLSFITPIYKGRGSVQDC 577

Query: 1355 ANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNER 1176
             +YRGIKL+SHTMKL+ER+I+ R+R E ++ ++Q+GF PG  T++AI  +R L E Y E+
Sbjct: 578  GSYRGIKLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREK 637

Query: 1175 KQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSE 996
            ++ LH+ F+DL+KA+D V R  +W  L  +GI  AYI+ I+ MY    + +RT  G +  
Sbjct: 638  RRALHVAFLDLQKAFDCVPRQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRP 697

Query: 995  FPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVW 816
            FP T+G+HQGSALSP+LF +++D ++ H+Q   P  M++ADDI LI E R  +  K+ +W
Sbjct: 698  FPITVGVHQGSALSPFLFNVVLDTVSAHIQDQPPWLMMYADDIALIAENRLTLERKVNLW 757

Query: 815  REALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEI 636
            +  LE+ G  ++ +KTEYM C     +R++ T + I       ++ F+YLGS++ E+G I
Sbjct: 758  KGTLENGGLKLNVSKTEYMAC----GSRDSST-ILIGPEPAVKSEKFRYLGSVMHESGGI 812

Query: 635  NKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQK 456
            + DV  RI A W KWR  + ++CDR+IP KLKG  YK+ +RP +LYG+ECW     H Q+
Sbjct: 813  DHDVHGRISAAWAKWREVTGVVCDRRIPPKLKGLIYKSIVRPVLLYGSECWPALSRHTQE 872

Query: 455  MRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVR 276
            + V EM+MLRWMCG TR DRIRN  IR  +GV  + +K++E RLRWFGHV RRP     +
Sbjct: 873  LHVTEMKMLRWMCGVTRSDRIRNTFIRGSLGVRDVADKLQERRLRWFGHVTRRP-----K 927

Query: 275  RLEGRESLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 111
               GR+ L  +  G    GRP+K W + +  DM    +    A DR +W  + R ADP
Sbjct: 928  NYVGRKCLAILVPGARPPGRPRKRWLDVVMQDMRANGLTTEDAKDRAKWSRLSRKADP 985


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  795 bits (2054), Expect = 0.0
 Identities = 405/960 (42%), Positives = 590/960 (61%), Gaps = 8/960 (0%)
 Frame = -1

Query: 2966 RKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKD 2787
            RK R  +WNIG+LTG+  EL D++ RR +    +QET+W G K++ +   GY+L Y+G  
Sbjct: 48   RKLRFATWNIGSLTGRCRELADVLMRRRVQCAFLQETRWKGNKSRNIGQ-GYRLIYTGSP 106

Query: 2786 RTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKF 2607
              + GV +++     + ++ V R+ DR++ +++++   + N++S Y PQ G   + K  F
Sbjct: 107  SGKAGVAVVLSEELRNGLLEVDRRCDRLMRVRVLIEGVITNLISAYTPQAGCSGSEKESF 166

Query: 2606 WEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAY 2427
            WE  E ++++IP  E +I+GGDLNGHVG+  E ++RVHGG+G+  RN EG  IL   +A 
Sbjct: 167  WEQFEEVLRAIPAAEVIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIAS 226

Query: 2426 DFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLV 2247
            D  + NTFF+K  +HLIT+KSG + +QIDY LTR+       NCKVIPGESLT QHRLLV
Sbjct: 227  DLAVVNTFFQKTPQHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLV 286

Query: 2246 LDIKLI---NIHLKRKKINIPRIKWWNLKNIEKRDSFVKSLVETIDWKVE-DKADETWNY 2079
            +D  +     +  KRK    PRI+WW L N   + SF ++ VE+ +     + A E W+ 
Sbjct: 287  MDYVVTPKKKVAEKRK----PRIRWW-LLNGTMQTSF-RAEVESQNLSTNTETAQEVWDR 340

Query: 2078 VTTQMKKIAKETLGVSNGNKW-NKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYK 1902
              + +    K  LG+S G +  +KE+WWWN E+QE ++EK+T++K      + E+   Y 
Sbjct: 341  AQSAIITAGKRVLGLSKGGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYI 400

Query: 1901 DAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENEN 1722
             AK+  +RA+  A++      Y  L+T EG+K IYK+A+ R+K T+D+ +   +KD    
Sbjct: 401  AAKRASKRAVARARSDRLSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGT 460

Query: 1721 ILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKM 1542
            +L     +K+RWR YF  L N      +       +E+  N      I   ET   L +M
Sbjct: 461  LLCNHASVKERWRCYFKELLNTQHPCSLP------TEIPPNLGLIAPITPDETRNCLRRM 514

Query: 1541 KTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQ 1362
            K  KAVG DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q
Sbjct: 515  KNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQ 574

Query: 1361 NCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYN 1182
            +C +YRG+K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y 
Sbjct: 575  DCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYR 634

Query: 1181 ERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGIS 1002
            E+++ LH+ F+DL+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +
Sbjct: 635  EKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDT 694

Query: 1001 SEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLE 822
              FP ++GLHQGSALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ 
Sbjct: 695  KPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVN 754

Query: 821  VWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENG 642
            +W+  LE+ G  ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G
Sbjct: 755  LWKGTLENGGLKLNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESG 809

Query: 641  EINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHE 462
             I+ DV  RI A W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H 
Sbjct: 810  GIDHDVQARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHT 869

Query: 461  QKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAP 282
            Q++ V EM+MLRWMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP    
Sbjct: 870  QELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP---- 925

Query: 281  VRRLEGRESLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 111
                 G+  L     G    GRP+K W + +K DM    +    A DR +WR + R ADP
Sbjct: 926  -ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 984


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  792 bits (2045), Expect = 0.0
 Identities = 406/963 (42%), Positives = 588/963 (61%), Gaps = 8/963 (0%)
 Frame = -1

Query: 2963 KYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKDR 2784
            K+R  + N+GTLTGKT EL  + KRR +D  C+QET+W G KA  +   GYKL Y G   
Sbjct: 52   KFRFATLNVGTLTGKTKELASLFKRRKVDFACLQETRWTGAKALNIGE-GYKLMYVGARH 110

Query: 2783 TRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKFW 2604
             RNGV I V    ++  + V R  DR++SLK++V  E+IN++S YAPQ G   A K  FW
Sbjct: 111  GRNGVAIAVKAEHLENFLEVNRINDRLMSLKVLVEGEVINVISAYAPQAGCSRAEKDSFW 170

Query: 2603 EDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAYD 2424
              LE  ++ IP  E +++GGDLNGH+G +N+ ++RVHGG+GF + N EG  IL  A A+D
Sbjct: 171  TTLEDHLRQIPSKETMLLGGDLNGHIGTENKAFKRVHGGHGFGTINEEGEVILSTAAAFD 230

Query: 2423 FIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVL 2244
              I NTFF K+ EH IT+KSG   SQIDY L  +       NCKVIPGE   TQHR++V+
Sbjct: 231  LAITNTFFAKKPEHTITYKSGQTTSQIDYILVNRAYIGRVTNCKVIPGECAVTQHRIVVM 290

Query: 2243 DIKLINIHLKRKKINIPRI-KWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQ 2067
            D+ L     K K  + P I KWWNLK  +K   F   L   +    E   D  W++++  
Sbjct: 291  DM-LFKKTSKTKTSHTPEITKWWNLKG-DKIPEFCNHL-SNLKVDTELDIDNIWDHLSKS 347

Query: 2066 MKKIAKETLGVSNGNKWN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKK 1890
            + K    TLG + G + N KE+WWW + +Q  +++K+ ++K   S +  E+ +RYK  KK
Sbjct: 348  IVKAGNITLGRTKGGRINNKETWWWTEAVQNAIQKKKDAFKTWQSTQTSEDQERYKRIKK 407

Query: 1889 EVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVK 1710
            E ++ +   +  A +  Y++L+TKEG+K I+K+AK R   TRD T+ + +KD N  +L  
Sbjct: 408  ETKKIVAVERAVALKTMYEQLETKEGQKCIFKLAKQRCWSTRDPTRCRAVKDPNGELLYG 467

Query: 1709 DEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGK 1530
            D D+   W +Y+  L N       T   +  +++ RN      I+ +E + AL KM   K
Sbjct: 468  DSDVLSAWHQYYEQLLNP------TQAAIQLTKVVRNIGLIPPIRPNEFKMALEKMPNKK 521

Query: 1529 AVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCAN 1350
            A G D IP+EAWKCL   GI  LTKLFN +L++ KMP  WR S ++PIYK KG    C+N
Sbjct: 522  ATGPDGIPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGKGSKYECSN 581

Query: 1349 YRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQ 1170
            YRGIKL+SHTMKL+ERVI++R+R+E S+  N +GF+ G ST + +  +  + E+Y E+ +
Sbjct: 582  YRGIKLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYREKLR 641

Query: 1169 DLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFP 990
             L++ F+D+EKA+DRV RD +W  L K+ +   Y++ I DMY    + +RT  G +    
Sbjct: 642  PLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQTKPIA 701

Query: 989  NTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWRE 810
               GLHQGS LSP+LF ++ID +T+  Q S     ++ADD+ +  E+R  +   L +W++
Sbjct: 702  VAEGLHQGSVLSPFLFGMVIDSLTEVAQSSASWTFIYADDVAICTESRTKLREALLLWKQ 761

Query: 809  ALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINK 630
             L++ G  +S AKT YM   F+  +  + + + IDG  V++   +KYLG+++  +G +  
Sbjct: 762  QLQAGGLILSVAKTHYMS--FNDPDPGDNSPISIDGQLVNMCDQYKYLGTMMHRSGNLKC 819

Query: 629  DVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMR 450
            ++ HRI A W KWR  S + CDR++P+KLKG  YKT IRP ++YG+E WA    +   ++
Sbjct: 820  NIQHRIAAAWLKWREVSGVTCDRRMPVKLKGMIYKTIIRPVLMYGSETWAATKRNVHTIQ 879

Query: 449  VAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLD-----A 285
            VAEM+MLRWMCG TRLD+IRNE++R  +GV  I +K++E+RLRW+GHV R+  D     A
Sbjct: 880  VAEMKMLRWMCGVTRLDKIRNEYVRGSLGVRDIADKMQESRLRWYGHVKRKQPDYVGNLA 939

Query: 284  PVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP-T 108
             +  L GR       R RGRPK  W++ +  D     + +    DR +WR  +R ADP T
Sbjct: 940  LLLDLPGR-------RPRGRPKTRWRDVVLKDKRECNVADEDVEDRAKWRSKVRKADPTT 992

Query: 107  *WD 99
             WD
Sbjct: 993  MWD 995


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  789 bits (2038), Expect = 0.0
 Identities = 388/654 (59%), Positives = 485/654 (74%), Gaps = 1/654 (0%)
 Frame = -1

Query: 2066 MKKIAKETLGVSNGNKWN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKK 1890
            ++K+AKE LG S G   + KESWWWN+E    VK K+   K LY  + +EN +RY+ AK+
Sbjct: 5    IRKVAKEVLGESKGFATHQKESWWWNEE----VKAKKECCKALYKDRTDENGERYRKAKQ 60

Query: 1889 EVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVK 1710
            E ++A+ EAK  AY+D YK+LDTKEGE DIYK+A+ REK+TRDL Q++CIKDE+  +L  
Sbjct: 61   EAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLAT 120

Query: 1709 DEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGK 1530
            +  +KD+WR YF+NLFNE      +LGEL  SE  RN +FYRRI+  E   AL KMK  K
Sbjct: 121  ENAVKDKWRGYFHNLFNEGHERSASLGELSNSEECRNYSFYRRIRKEEVVVALKKMKHRK 180

Query: 1529 AVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCAN 1350
            AVG DDIPIE WK LG  GI+WL  LFN ILKTKKMP+EWR S L+PIYKNKGD+QNC N
Sbjct: 181  AVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMN 240

Query: 1349 YRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQ 1170
            YRGIKL+SHTMKLWERVIE R+R ET + DNQFGFMPGRST+EAI+L+RRL E+Y + K+
Sbjct: 241  YRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKK 300

Query: 1169 DLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFP 990
            DLHMVFIDLEKAYDRV+RDI+WR+LEK+G+++AYI AIKDMY+G  T +RT  G +  FP
Sbjct: 301  DLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFP 360

Query: 989  NTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWRE 810
             T+GLHQGS+LSPYLF L++DE+T H+Q  IP CMLFA DIVLIDET+EGVNAKL +WRE
Sbjct: 361  ITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWRE 420

Query: 809  ALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINK 630
             LESKG  +SR+KTEYMEC FS N   NE  V+I   E+  +  F+YLGSI+++NGE+++
Sbjct: 421  VLESKGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDE 480

Query: 629  DVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMR 450
            D+ HRIQAGW KW+SAS +LCDR++PLKLKGKFY+TAIRPAML                 
Sbjct: 481  DLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAML----------------- 523

Query: 449  VAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRL 270
                            D+IRNE IR KVGVA I+ K+RE  LRWFGHV RRP DAP+RR 
Sbjct: 524  ---------------KDKIRNEDIRGKVGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRC 568

Query: 269  EGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADPT 108
            +   +  Q ++GRGRP+KT +E ++ D+ YL++ E+M  DR +WR  I +ADPT
Sbjct: 569  D-YGTKVQGRKGRGRPRKTLEETLRKDLEYLDLMEDMTQDRAQWRSKIHVADPT 621


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  788 bits (2035), Expect = 0.0
 Identities = 401/952 (42%), Positives = 585/952 (61%), Gaps = 8/952 (0%)
 Frame = -1

Query: 2966 RKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKD 2787
            RK R  +WNIG+LTG+  EL D++ RR +    +QET+W G K++ +   GY+L Y+G  
Sbjct: 316  RKLRFATWNIGSLTGRCRELADVLMRRRVQCAFLQETRWKGNKSRNIGQ-GYRLIYTGSP 374

Query: 2786 RTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKF 2607
              + GV +++     + ++ V R+ DR++ +++++   + N++S Y PQ G   + K  F
Sbjct: 375  SGKAGVAVVLSEELRNGLLEVDRRCDRLMRVRVLIEGVITNLISAYTPQAGCSGSEKESF 434

Query: 2606 WEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAY 2427
            WE  E ++++IP  E +I+GGDLNGHVG+  E ++RVHGG+G+  RN EG  IL   +A 
Sbjct: 435  WEQFEEVLRAIPAAEVIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIAS 494

Query: 2426 DFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLV 2247
            D  + NTFF+K  +HLIT+KSG + +QIDY LTR+       NCKVIPGESLT QHRLLV
Sbjct: 495  DLAVVNTFFQKTPQHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLV 554

Query: 2246 LDIKLI---NIHLKRKKINIPRIKWWNLKNIEKRDSFVKSLVETIDWKVE-DKADETWNY 2079
            +D  +     +  KRK    PRI+WW L N   + SF ++ VE+ +     + A E W+ 
Sbjct: 555  MDYVVTPKKKVAEKRK----PRIRWW-LLNGTMQTSF-RAEVESQNLSTNTETAQEVWDR 608

Query: 2078 VTTQMKKIAKETLGVSNGNKW-NKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYK 1902
              + +    K  LG+S G +  +KE+WWWN E+QE ++EK+T++K      + E+   Y 
Sbjct: 609  AQSAIITAGKRVLGLSKGGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYI 668

Query: 1901 DAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENEN 1722
             AK+  +RA+  A++      Y  L+T EG+K IYK+A+ R+K T+D+ +   +KD    
Sbjct: 669  AAKRASKRAVARARSDRLSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGT 728

Query: 1721 ILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKM 1542
            +L     +K+RWR YF  L N      +       +E+  N      I   ET   L +M
Sbjct: 729  LLCNHASVKERWRCYFKELLNTQHPCSLP------TEIPPNLGLIAPITPDETRNCLRRM 782

Query: 1541 KTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQ 1362
            K  KAVG DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q
Sbjct: 783  KNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQ 842

Query: 1361 NCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYN 1182
            +C +YRG+K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y 
Sbjct: 843  DCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYR 902

Query: 1181 ERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGIS 1002
            E+++ LH+ F+DL+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G +
Sbjct: 903  EKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDT 962

Query: 1001 SEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLE 822
              FP ++GLHQGSALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++ 
Sbjct: 963  KPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVN 1022

Query: 821  VWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENG 642
            +W+  LE+ G  ++  KTEYM C        +   + I       ++ F+YLGSI+ E+G
Sbjct: 1023 LWKGTLENGGLKLNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHESG 1077

Query: 641  EINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHE 462
             I+ DV  RI A W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H 
Sbjct: 1078 GIDHDVQARISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHT 1137

Query: 461  QKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAP 282
            Q++ V EM+MLRWMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP    
Sbjct: 1138 QELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP---- 1193

Query: 281  VRRLEGRESLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWR 135
                 G+  L     G    GRP+K W + +K DM    +    A DR +WR
Sbjct: 1194 -ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWR 1244


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae]
          Length = 1500

 Score =  685 bits (1767), Expect = 0.0
 Identities = 352/806 (43%), Positives = 509/806 (63%), Gaps = 1/806 (0%)
 Frame = -1

Query: 2738 QVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKFWEDLETLMQSIPQNEK 2559
            +VV VTR  DRI+++++ +G  ++++VS +APQ+G  D  K +F E L+  +Q I +N+ 
Sbjct: 4    KVVEVTRVSDRIMTVRLALGFGVVSVVSAFAPQMGCGDKEKEEFQEGLDRELQRIARNDT 63

Query: 2558 VIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAYDFIIGNTFFKKRDEHL 2379
            +I+G DLNG VG+D   YE  HGG G+  RN EG  +L  A A++  + NT+FKK++ +L
Sbjct: 64   IIVGVDLNGRVGRDRCGYEGNHGGQGYGERNTEGENVLRMAQAHNLAVVNTYFKKQERYL 123

Query: 2378 ITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN 2199
            +T++SG  +SQIDY L ++   K  KNCKVI GE LT QHRLLV+D K       + K+ 
Sbjct: 124  VTYRSGNTQSQIDYILVKRQLLKRVKNCKVILGECLTGQHRLLVMDYKTECAKKNKAKLE 183

Query: 2198 IPR-IKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGN 2022
            + R IKWW LK  ++++ F + + +  +W+      E W      +K+  +         
Sbjct: 184  MERKIKWWCLK--DRKEKFTEQVAD--NWR-----RENWEAKEEDIKENMR--------- 225

Query: 2021 KWNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 1842
                   WWN+++QE  K+K+  +K     + +E+L  Y   K++ +R + +AK  AY +
Sbjct: 226  -------WWNEDVQEVTKDKKIKFKRWQKTRQKEDLDEYVIVKRQTKRVVAKAKVMAYVE 278

Query: 1841 FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 1662
             Y+KLD++EGEK +Y+IA+ RE++ RD  Q+K IKD    +++ +  +K+RWR YF  L 
Sbjct: 279  LYQKLDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYFEKLL 338

Query: 1661 NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 1482
            NE    E    EL +  L  N T    I   E  +A+ KMK  KA G D++PIE +K + 
Sbjct: 339  NEENPRE----ELPEG-LPENHTAVEGITKEEVIQAMKKMKNRKATGPDEVPIETFKEMK 393

Query: 1481 GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1302
             +G+  LT+L+  I +  KMP EWR+S L+P++K KGD+Q+C NYRGI L+SH MKLWER
Sbjct: 394  EMGLVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDCNNYRGIALMSHAMKLWER 453

Query: 1301 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1122
            +IE R+R    I +NQFGF  GRSTI+AI  ++ L E+Y E+++DLHMVF+DLEKAYDRV
Sbjct: 454  IIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYKEKRKDLHMVFVDLEKAYDRV 513

Query: 1121 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 942
             R ++W  + KRGI   YI  +KDMY G    +R+  G ++ FP  +G+ QGSALSP+LF
Sbjct: 514  PRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQGSALSPFLF 573

Query: 941  ILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEY 762
            IL++D +TK +QK  P CMLFADDI+L  E+RE V   LE W + +E +G  +SR  T Y
Sbjct: 574  ILVLDTLTKDIQKEPPWCMLFADDIMLCAESREEVEKDLERWVQCMEERGLKMSRMMTGY 633

Query: 761  MECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSA 582
            M   FS+ +   E+ +KI   ++  T+ FKYLGSII  +G +  ++  R  AGW KWR  
Sbjct: 634  MVAKFSEGSDEMES-MKIGEKKLRRTEEFKYLGSIISTDGFLAGEIRARTTAGWVKWREV 692

Query: 581  SSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRL 402
            S ++CD  IP  LKGK YK  IR A+++ AECW  + + EQ M V EMRMLRWM G  R 
Sbjct: 693  SGVICDNGIPAWLKGKVYKNVIRQALVFRAECWCIRKKEEQDMSVTEMRMLRWMLGMMRT 752

Query: 401  DRIRNEHIRNKVGVAPIDEKIRETRL 324
            D+I+NE IR ++ V  + E +RE RL
Sbjct: 753  DKIKNEEIRKRLKVTQVVE-MREKRL 777


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  663 bits (1710), Expect = 0.0
 Identities = 318/511 (62%), Positives = 401/511 (78%)
 Frame = -1

Query: 1736 DENENILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEK 1557
            D++  +L ++E I +RW+ YF  LFNE ++   +LG L   E ++N  +YRRI+  E ++
Sbjct: 2    DKDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKE 61

Query: 1556 ALNKMKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKN 1377
            ALN+MK  +AVG D+IPIE WK LG   I+WLTKLFN IL++KKMP EWRKS L+PIYKN
Sbjct: 62   ALNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKN 121

Query: 1376 KGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRL 1197
            KGDIQ+C NYRGIKL++HTMKLWERVIE  +R ET + +NQFGFM GRS  EAI+L+RR+
Sbjct: 122  KGDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRM 181

Query: 1196 CEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRT 1017
             E+Y   K+DLHMVFIDLEKAYDRV R+++W+VLEK  ++IAYI AIKDMYDG TT ++T
Sbjct: 182  MERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKT 241

Query: 1016 PTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGV 837
              G++ EFP  IGLHQGS+LSPYLF ++++ +T+H+Q+ +P C+LFADDIVL+ E RE +
Sbjct: 242  QGGVTEEFPIGIGLHQGSSLSPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELREDL 301

Query: 836  NAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSI 657
            N KLE+W+EALE  G  ISR+KTEYMEC FS    N   +V+I  + +   KSFKYLG I
Sbjct: 302  NKKLELWKEALEVYGLRISRSKTEYMECKFSLRRENTNIEVEIGENILRKVKSFKYLGCI 361

Query: 656  IEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWAT 477
            I++NGEI +DV HRIQAGW+KWRSAS  +CD+K+PLKLKGKFY+TAIRPAMLYG EC A 
Sbjct: 362  IQDNGEIEQDVNHRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECCAA 421

Query: 476  KYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRR 297
            K EHE K+ VAE++MLRWM GHTRLD+IRNE IR +VGVAPI EKI E+RLRWFGHV RR
Sbjct: 422  KGEHEHKLSVAEVKMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRR 481

Query: 296  PLDAPVRRLEGRESLTQIKRGRGRPKKTWKE 204
            P++ PVRR++  E   Q  +GRGRPKKT  E
Sbjct: 482  PIEHPVRRVDEMED-GQRAKGRGRPKKTIHE 511


>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 816

 Score =  643 bits (1659), Expect = 0.0
 Identities = 327/812 (40%), Positives = 500/812 (61%), Gaps = 4/812 (0%)
 Frame = -1

Query: 2957 RIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKDRTR 2778
            RIG+ N+G+LTGK+ E+ D+MKRRNI ++C+QET+W G KA+ +   G KL+Y+G D  R
Sbjct: 17   RIGTLNVGSLTGKSREVADLMKRRNIQVLCLQETRWKGAKAREIGE-GVKLYYNGDDTKR 75

Query: 2777 NGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKFWED 2598
            NGV I V     D V  V+R   RI++++I        I+SVYAPQ G     K +F+ +
Sbjct: 76   NGVAIAVAESLKDSVSVVSRISSRIMAVRIETKEGYWTIISVYAPQAGCPAYEKDEFYLN 135

Query: 2597 LETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAYDFI 2418
            L+  ++S+P+ + + I GD+NGHVG +    ERVHGG G   RN EG  +LD A+A+D  
Sbjct: 136  LDEAIRSVPEGDYLTIAGDMNGHVGSERRGLERVHGGRGIGVRNEEGERVLDLAMAHDLA 195

Query: 2417 IGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDI 2238
            + +TFF KR    +T+ SG N+++ID+ L R++  K  K+ KV+PGE L TQHR L+ DI
Sbjct: 196  VCSTFFAKRRSQKVTYSSGGNETEIDHVLVRRSSLKTVKDIKVLPGEELATQHRPLLADI 255

Query: 2237 KLINIHLKRKKINIPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKK 2058
              I +  K +     RI+WW L  +E R++  + ++E      E    +TW+     +  
Sbjct: 256  A-IELPKKSRTRTERRIRWWKLHRLE-RENLKEKILEVGLPDPEGPIQQTWSNAVKVILG 313

Query: 2057 IAKETLGVSNGN-KWNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVR 1881
             AKETLG + G  + NKE+W+WN E+Q  V+EK+ +YK     +  E+L  YK +K+  +
Sbjct: 314  CAKETLGETRGGLRGNKEAWFWNDEVQRVVREKKLAYKRWQKTRALEDLAAYKTSKRLAK 373

Query: 1880 RAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDED 1701
             A+ +AK    +  Y+KLD++EGEK ++++AK R + T+D+  +K +++    IL K  +
Sbjct: 374  AAVAKAKNIEMDALYEKLDSREGEKFVFRLAKARHRATQDIRVVKAVRNSEGAILRKPGE 433

Query: 1700 IKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQL---HETEKALNKMKTGK 1530
            ++ RW+ YF+ L NE         E  +   + +      I+L    E  KA+ KMK GK
Sbjct: 434  VRRRWKEYFDRLLNE---------EFARENSSHSEATAGPIKLWTEDEVRKAIGKMKVGK 484

Query: 1529 AVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCAN 1350
            A G D +PIEAWK LG  GI WLT+  N +    ++PD WR+S ++PI+K KGD  +C+N
Sbjct: 485  ATGPDGVPIEAWKALGEHGIKWLTRFLNTVTAEGRIPDAWRRSTIVPIFKQKGDAMDCSN 544

Query: 1349 YRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQ 1170
            YRGI+L +HTMKL+ER++++R+R    I + QFGFMP RST +AI + R++ E+Y E+++
Sbjct: 545  YRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFIARQIMEKYREKRR 604

Query: 1169 DLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFP 990
              ++ F+DLEKA+DR+ R+++W  L KR +    I  +KDMYDG TT IRT  G +    
Sbjct: 605  PCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQTGAID 664

Query: 989  NTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWRE 810
             T+G+HQGSALSP+LF+L +D IT+ L     + +L+ADDI LI E++E +   L+ W++
Sbjct: 665  VTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKEELQDNLQKWQK 724

Query: 809  ALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINK 630
             L   G  ++  KT+++      +    E+     G  +   + F+YLGS +  +G +++
Sbjct: 725  VLAENGLRLNVKKTKFL-----SSEEGMESITDGYGEAIEKVQDFRYLGSDLAADGSVDQ 779

Query: 629  DVTHRIQAGWNKWRSASSILCDRKIPLKLKGK 534
             V  RI A W KWR ++ ILCDR+    LKG+
Sbjct: 780  AVKSRINAAWMKWRESTGILCDRRCSRTLKGR 811


>emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 854

 Score =  639 bits (1647), Expect = e-180
 Identities = 326/853 (38%), Positives = 510/853 (59%), Gaps = 3/853 (0%)
 Frame = -1

Query: 2975 KKIRKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYS 2796
            + + K R+ + N+GTLTG+  +L + ++RR ID   +Q T+W   K++ +   G+K    
Sbjct: 21   RNVWKIRVATLNVGTLTGRLYDLAEALERRRIDFCAVQGTRWSCCKSRDIGL-GFKAVLC 79

Query: 2795 GKDRTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATK 2616
            G  +T NGVGIIV   F D +V V R  DR++ + +V+  +  ++ S YAPQ G  + TK
Sbjct: 80   GGPKTTNGVGIIVSERFRDSIVSVERFDDRLMKIVVVIERQKYHLFSAYAPQTGCSEQTK 139

Query: 2615 AKFWEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFA 2436
             KFW  L+     +P  E +++ GDLNGHVG   + Y   HGG+G+ SRN +G  IL++A
Sbjct: 140  DKFWNLLDEKTAEVPLQEAIVVAGDLNGHVGATKDGYS-CHGGFGYGSRNTDGERILEYA 198

Query: 2435 VAYDFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHR 2256
             +++  I NT F+KRD HLITF SG N++QID+ L R  D+ +  + K +P E++ TQHR
Sbjct: 199  DSHNLAIVNTRFRKRDSHLITFYSGENRTQIDFVLVRHRDQGLVTDAKTVPYETVATQHR 258

Query: 2255 LLVLDIKLINIHLKRKKINIP-RIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNY 2079
             L+  +K+     K  + + P RIKWW LK  EK ++ V S++      V    DETW  
Sbjct: 259  PLICTLKIAPPKPKLAERSGPARIKWWRLK--EKEETVVSSILLPAVTTV----DETWKG 312

Query: 2078 VTTQMKKIAKETLGVSNGN--KWNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRY 1905
                + ++A+  LGV+     K +K++W W   +++KV EK+  Y      K ++N +RY
Sbjct: 313  AAEAITRVARSKLGVTKPGRRKLDKQTWLWTDHVRDKVHEKKKQYHAFLIEKTDDNWQRY 372

Query: 1904 KDAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENE 1725
            + AKKE ++A+   K   + +  KKL+++EGE+ IY++AK R +QT D+ +   I DEN 
Sbjct: 373  QIAKKEAKKAVASEKAAHFAELNKKLESREGERYIYRLAKTRNRQTEDIEKFFGINDENG 432

Query: 1724 NILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNK 1545
             +L     + +RWR YF N+      + V                 ++I + ET  AL K
Sbjct: 433  RLLTDRRQVLERWREYFANI------STVEFAHPAIPCAPPVHGPVQKITVSETITALKK 486

Query: 1544 MKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDI 1365
            MK+GKA G DD+  + WK  G     WLT+ FN  +  KK+P+ W++S  IPI+K KG +
Sbjct: 487  MKSGKATGPDDVAADLWKSKGWNPAGWLTEFFNQAVAEKKVPESWQQSTTIPIWKKKGSL 546

Query: 1364 QNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQY 1185
             +CA YR I+L+SH+MK +ER++++RIR+   ++ NQ  F+ G STI+AIH    L E++
Sbjct: 547  GDCACYRPIRLLSHSMKFFERIVDSRIRDIVELITNQCVFVAGCSTIDAIHATSLLLEKH 606

Query: 1184 NERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGI 1005
            +E+++ +H+ F+DLEKA+ RV RD++W  L + G+   +I+ ++ +Y    + ++   G 
Sbjct: 607  HEKRRPIHLAFLDLEKAFGRVPRDVIWYALRQHGVPEEHIEWVRILYTSPKSRVQMAAGT 666

Query: 1004 SSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKL 825
             +EFP ++G+HQGSALSP LF++++D ITK LQK  P  +L+ADD++L  E +  + +++
Sbjct: 667  LTEFPISVGVHQGSALSPLLFVVVMDTITKDLQKPAPWTLLYADDVMLASEDKSELESQV 726

Query: 824  EVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEEN 645
            + W   L   G  ++  KTEY+    S+        +KI+G E++ T +FKYLGS I  +
Sbjct: 727  QTWSNRLAMFGLRLNVKKTEYLSTDSSEPG-----SIKINGTELTWTTTFKYLGSAIAPD 781

Query: 644  GEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEH 465
            G +      R+ A W KWRS + +LCD+ IP +LK K Y+T IRP  +Y AECW    E 
Sbjct: 782  GSLGFKTNSRVNAAWLKWRSMTGVLCDKNIPERLKSKIYRTVIRPVAIYSAECWPATKEV 841

Query: 464  EQKMRVAEMRMLR 426
            E ++ V E +MLR
Sbjct: 842  EARLSVMETKMLR 854


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 517

 Score =  626 bits (1614), Expect = e-176
 Identities = 302/545 (55%), Positives = 390/545 (71%), Gaps = 1/545 (0%)
 Frame = -1

Query: 2087 WNYVTTQMKKIAKETLGVSNG-NKWNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLK 1911
            W  +  ++KK+AKETLG S G     KESWWWN  +Q KV+ KR  +K    CKN E   
Sbjct: 2    WERMAHEIKKVAKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSRCKNVETWD 61

Query: 1910 RYKDAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDE 1731
            +YK A+KE ++ + EA+T+A+E  Y+ L TKEGEK IYK++K RE++TRDL Q+KCIKDE
Sbjct: 62   KYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLDQVKCIKDE 121

Query: 1730 NENILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKAL 1551
               +LV       R RR                          N  +YRRIQ HE  +AL
Sbjct: 122  EGRVLV-------RHRRG-----------------------GPNYNYYRRIQEHEVREAL 151

Query: 1550 NKMKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKG 1371
             +M + +AVG D+IPIE WK LG  G  WL  LFN I++TKKM DEWR+S LIPI KNKG
Sbjct: 152  KRMGSDEAVGPDNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTLIPIDKNKG 211

Query: 1370 DIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCE 1191
            DIQNCANYRGIKL+SHTMKLWERVI+ R+R ET + DNQFGFM GRST+EAI+L++R+ E
Sbjct: 212  DIQNCANYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVME 271

Query: 1190 QYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPT 1011
            +Y   K+DLH+VF DLEK YDRV R+I+W+ LEK+ ++IAYI AIKDMY+  +T ++T  
Sbjct: 272  RYRTDKKDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQD 331

Query: 1010 GISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNA 831
            G + +FP TIGLHQGS L+PYLF L++D +T+H+Q+  P CMLFADD+VL+ E+RE VN 
Sbjct: 332  GTTEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNG 391

Query: 830  KLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIE 651
            +LE WR+ALE+ GF +SR+KT+YMEC+FS     +  +VK+  H +     FKYLGS ++
Sbjct: 392  RLETWRQALEAYGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQ 451

Query: 650  ENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKY 471
             +GEI  DV+HRIQAGW KWR ASS+LCD+K+PLKL GKFY+TA+RPA+LYG ECWA K 
Sbjct: 452  NDGEIEADVSHRIQAGWLKWRRASSVLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKS 511

Query: 470  EHEQK 456
            +HE +
Sbjct: 512  QHENQ 516


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 1526

 Score =  536 bits (1380), Expect = e-149
 Identities = 264/642 (41%), Positives = 389/642 (60%), Gaps = 1/642 (0%)
 Frame = -1

Query: 2108 EDKADETWNYVTTQMKKIAKETLGVSNGN-KWNKESWWWNQEIQEKVKEKRTSYKVLYSC 1932
            E    +TW+     + + AKETLG + G  + +KE+W+WN  +Q  V++K+++YK     
Sbjct: 360  EGPIQQTWSNAVEVILRCAKETLGETRGGFRGDKEAWFWNDGVQRVVRQKKSAYKRWQRT 419

Query: 1931 KNEENLKRYKDAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQ 1752
            +  E+L  Y+ +K+  + A+ +AK    +  Y+ LD++EGEK ++++AK R   T+D+  
Sbjct: 420  RAPEDLSAYRTSKRLAKAAVAKAKNTEMDALYEILDSREGEKFVFRLAKARHLATQDIGV 479

Query: 1751 IKCIKDENENILVKDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQL 1572
            +K +K+    IL         W  YF+ L NE    +        S+L            
Sbjct: 480  VKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEEFARQ------NSSQLEATAGPINLWTE 533

Query: 1571 HETEKALNKMKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILI 1392
            +E  +A+ KMK GKA G D +PI+AWK LG  G+ WLT+  N +    ++PD WR+S ++
Sbjct: 534  NEVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWLTRFLNTVTAKGRIPDAWRRSTIV 593

Query: 1391 PIYKNKGDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIH 1212
            PI+K KGD  +C+NYRGI+L +HTMKL+ER++++R+R    I + QFGFMPGRST +AI 
Sbjct: 594  PIFKQKGDAMDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIF 653

Query: 1211 LIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGIT 1032
            + R++  +Y E+++  ++ F+DLEKA+DR+ R ++WR L KR +    I  +KDMYDG T
Sbjct: 654  ITRQVMGKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGST 713

Query: 1031 TCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDE 852
            T IRTP G +     T+G+HQGSALSP+LF+L +D IT+ L     + +L+ADDI LI E
Sbjct: 714  TTIRTPHGQTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAE 773

Query: 851  TREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFK 672
            +++ +  KL+ W+  L   G  ++  K +++           E+ V   G  +   + F+
Sbjct: 774  SKDELQDKLQNWQRVLAESGLRLNVKKAKFL-----SPEEGTESVVDGRGEAIEKVQDFR 828

Query: 671  YLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGA 492
            YLGS +  +G +++ V  RI A W KWR ++ ILCD +    LKGK Y+T +RP MLYG+
Sbjct: 829  YLGSDLAADGSVDQAVKSRISAAWMKWRESTGILCDSRCSRTLKGKVYRTVVRPTMLYGS 888

Query: 491  ECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFG 312
            ECW     HE ++  AEMRMLRW CG TRLDR RNE +R  +  API  K R  RLRWFG
Sbjct: 889  ECWPVSKSHEGQLHSAEMRMLRWACGWTRLDRARNEDVRTAMQTAPIQMKTRGQRLRWFG 948

Query: 311  HVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDM 186
            HV RRP   P+R  E  E   Q KR RG PKK W++ IK D+
Sbjct: 949  HVLRRPQSHPIR--EAMEFEAQGKRPRGAPKKRWRDVIKKDL 988



 Score =  159 bits (403), Expect = 6e-36
 Identities = 90/308 (29%), Positives = 164/308 (53%), Gaps = 3/308 (0%)
 Frame = -1

Query: 2192 RIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGN-KW 2016
            RI+WW L   E R+   + ++E      E    +TW+     + + AKETLG + G  + 
Sbjct: 65   RIRWWKLHQSE-REHLKEKILEAGLPNPEGPIQQTWSNAVEVILRCAKETLGETRGGFRG 123

Query: 2015 NKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYEDFY 1836
            +KE+W+WN E+Q  V++K+++YK     +  E+L  Y+ +K+  + A+ +AK    +  Y
Sbjct: 124  DKEAWFWNDEVQRVVRQKKSAYKRWQKTRAPEDLAAYRTSKRLAKAAVAKAKNTEMDALY 183

Query: 1835 KKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLFNE 1656
            +KLD++EGEK ++++AK R + TRD+  +K +++    IL K  +++ RW  YF+ L NE
Sbjct: 184  EKLDSREGEKFVFRLAKARHRATRDIGVVKSVRNSEGAILRKPGEVRRRWEEYFDGLLNE 243

Query: 1655 PKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLGGV 1476
                         S+L            +E  +A+ KMK GKA G D +PIEAWK LG  
Sbjct: 244  ------EFARQNSSQLEATAGPINLWTENEVRRAMGKMKVGKATGPDGVPIEAWKALGEY 297

Query: 1475 GISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMK--LWER 1302
            G+  + + ++   ++    +  R      +++  G+  +C++   ++    + +  L E+
Sbjct: 298  GVKCMEEKYH---RSNLQAEGGRDG----VFQLPGNQVDCSHDEAVRAAGQSEREHLKEK 350

Query: 1301 VIEARIRN 1278
            ++EA + N
Sbjct: 351  ILEAGLPN 358


>gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1470

 Score =  513 bits (1322), Expect = e-142
 Identities = 260/631 (41%), Positives = 389/631 (61%), Gaps = 2/631 (0%)
 Frame = -1

Query: 2966 RKYRIGSWNIGTLTGKTIELVDIMKRRNIDIMCIQETKWVGEKAKTLDTTGYKLWYSGKD 2787
            RK R  +WNIG+LTG+  EL D++ RR +    +QET+W G K++ +   GY+L Y+G  
Sbjct: 834  RKLRFATWNIGSLTGRCRELADVLMRRRVQCAFLQETRWKGNKSRNIGQ-GYRLIYTGSP 892

Query: 2786 RTRNGVGIIVDPLFIDQVVGVTRKGDRIISLKIVVGNELINIVSVYAPQVGLDDATKAKF 2607
              + GV +++     + ++ V R+ DR++ +++++   + N++S Y PQ G   + K  F
Sbjct: 893  SGKAGVAVVLSEELRNGLLEVDRRCDRLMRVRVLIEGVITNLISAYTPQAGCSGSEKESF 952

Query: 2606 WEDLETLMQSIPQNEKVIIGGDLNGHVGKDNEDYERVHGGYGFSSRNNEGRTILDFAVAY 2427
            WE  E ++++IP  E +I+GGDLNGHVG+  E ++RVHGG+G+  RN EG  IL   +A 
Sbjct: 953  WEQFEEVLRAIPAAEVIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIAS 1012

Query: 2426 DFIIGNTFFKKRDEHLITFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLV 2247
            D  + NTFF+K  +HLIT+KSG + +QIDY LTR+       NCKVIPGESLT QHRLLV
Sbjct: 1013 DLAVVNTFFQKTPQHLITYKSGSHSTQIDYLLTRRCHIGKVTNCKVIPGESLTAQHRLLV 1072

Query: 2246 LDIKLINIHLKRKKINIPRIKWWNLKNIEKRDSFVKSLVETIDWKVE-DKADETWNYVTT 2070
            +D  ++    K  +   PRI+WW L N   + SF ++ VE+ +     + A E W+   +
Sbjct: 1073 MDY-VVTPKKKVAEKRKPRIRWW-LLNGTMQTSF-RAEVESQNLSTNTETAQEVWDRAQS 1129

Query: 2069 QMKKIAKETLGVSNGNK-WNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAK 1893
             +    K  LG+S G +  +KE+WWWN E+QE ++EK+T++K      + E+   Y  AK
Sbjct: 1130 AIITAGKRVLGLSKGGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAK 1189

Query: 1892 KEVRRAIYEAKTKAYEDFYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILV 1713
            +  +RA+  A++      Y  L+T EG+K IYK+A+ R+K T+D+ +   +KD    +L 
Sbjct: 1190 RASKRAVARARSDRLSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLC 1249

Query: 1712 KDEDIKDRWRRYFNNLFNEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTG 1533
                +K+RWR YF  L N      +       +E+  N      I   ET   L +MK  
Sbjct: 1250 NHASVKERWRCYFKELLNTQHPCSL------PTEIPPNLGLIAPITPDETRNCLRRMKNR 1303

Query: 1532 KAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCA 1353
            KAVG DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +Q+C 
Sbjct: 1304 KAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCG 1363

Query: 1352 NYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERK 1173
            +YRG+K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y E++
Sbjct: 1364 SYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKR 1423

Query: 1172 QDLHMVFIDLEKAYDRVNRDIMWRVLEKRGI 1080
            + LH+ F+DL+KA+D V R  +W  L  +GI
Sbjct: 1424 RALHVAFLDLQKAFDCVPRQCIWWALRFKGI 1454


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  486 bits (1251), Expect = e-134
 Identities = 231/379 (60%), Positives = 295/379 (77%)
 Frame = -1

Query: 1244 MPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYI 1065
            MPGRST+EAI+L+RR+ EQY   +QDLH++FIDLEKAYDRV R+I+W+ LEK+G+++AYI
Sbjct: 1    MPGRSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYI 60

Query: 1064 DAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECM 885
             AI+DMYD ++T +RT  G S +FP TIGLHQGS LSPYLF LI+D +T+ +Q+  P CM
Sbjct: 61   RAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCM 120

Query: 884  LFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKID 705
            LFADDIVL+ E+RE +N +LE WR ALE+ GF +SR+K+EYMEC F+K   +N ++VKI 
Sbjct: 121  LFADDIVLLGESREELNERLETWRRALETHGFRLSRSKSEYMECQFNKRRVSN-SEVKIG 179

Query: 704  GHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYK 525
             H +     FKYLGS+I+++GEI  DV HRIQAGW KWR AS +LCD K+P+KLKGKFY+
Sbjct: 180  DHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYR 239

Query: 524  TAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDE 345
            TA+RP +LYG ECWA K +HE K+ VAEMRMLRWMCG TR D+IRNE IR +VGVAPI E
Sbjct: 240  TAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVE 299

Query: 344  KIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINE 165
            K+ E RLRWFGHV RRP+D+ +RR++  E   Q  RGRGRPKKT +E IK D+    ++ 
Sbjct: 300  KMVENRLRWFGHVERRPVDSVLRRVDQMER-RQTIRGRGRPKKTIREVIKKDLEINGLDR 358

Query: 164  NMAYDRKRWRDMIRIADPT 108
            +M  DR  WR +I +ADPT
Sbjct: 359  SMVLDRTLWRKLIHVADPT 377


>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 479

 Score =  473 bits (1218), Expect = e-130
 Identities = 225/481 (46%), Positives = 312/481 (64%)
 Frame = -1

Query: 1553 LNKMKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNK 1374
            + KMK GKA G D +PIEAWK LG  G+ WLT+  N +    ++PD WRKS ++PI+K K
Sbjct: 1    MGKMKVGKATGPDGVPIEAWKALGEYGVKWLTRFLNTVTAEGRIPDAWRKSTIVPIFKQK 60

Query: 1373 GDIQNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLC 1194
            GD   C+NYRGI+L +HTMKL+ER++++R+R    I   QFGFMP RST +AI + R++ 
Sbjct: 61   GDAMECSNYRGIRLTTHTMKLYERLVDSRLRELVPISQKQFGFMPERSTTDAIFIARQVM 120

Query: 1193 EQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTP 1014
            E+Y E+++  ++ F+DLEKA+DR+ R ++WR L KR +    I  +KDMYDG TT IRTP
Sbjct: 121  EKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTP 180

Query: 1013 TGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVN 834
             G +     T+G+HQGSALSP+LF+L +D IT+ L     + +L+ADDI LI E+++ + 
Sbjct: 181  HGQTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAESKDELQ 240

Query: 833  AKLEVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSII 654
             KL+ W+  L   G  ++  KT+++      +    E+ V   G  +   + F+YLGS +
Sbjct: 241  DKLQNWQRVLAESGLRLNVKKTKFL-----SSEEGTESIVDGRGEAIEKVQDFRYLGSDL 295

Query: 653  EENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATK 474
              +G +++ V  RI A W KWR ++ ILCDR+    LKGK Y+T +RP MLYG+ECW   
Sbjct: 296  AADGSVDQAVKSRINAAWMKWRESTGILCDRRCSRTLKGKVYRTVVRPTMLYGSECWPVS 355

Query: 473  YEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRP 294
              HE ++  AEMRMLRW CG TRLDR+RNE +R  +  API  K+RE RLRWFGHV RRP
Sbjct: 356  KSHEGQLHSAEMRMLRWACGWTRLDRVRNEDVRTAMQTAPIQLKMREQRLRWFGHVLRRP 415

Query: 293  LDAPVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIAD 114
               P+R  E  E   Q KR RG PKK W++ IK D+   ++    A DR +WR + R AD
Sbjct: 416  QSHPIR--EAMEFEAQGKRPRGAPKKRWRDVIKKDLAETKVTAEDAVDRMKWRRLTRTAD 473

Query: 113  P 111
            P
Sbjct: 474  P 474


>ref|XP_005753688.1| PREDICTED: RNA-directed DNA polymerase from mobile element
            jockey-like [Pundamilia nyererei]
          Length = 623

 Score =  461 bits (1185), Expect = e-126
 Identities = 243/632 (38%), Positives = 364/632 (57%), Gaps = 7/632 (1%)
 Frame = -1

Query: 1985 IQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYEDFYKKLDTKEGEK 1806
            +Q+ +KEK+++ KV    +++ + ++Y+  +   ++A+  AK   Y+  Y++LDT  G  
Sbjct: 4    VQQTIKEKKSALKVWLQSRSDGDYQQYRALRSAAKKAVAAAKASHYDQLYEELDTPGGAN 63

Query: 1805 DIYKIAKFREKQTRDLTQIKCIKDENENILVKD-----EDIKDRWRRYFNNLFNEPKRNE 1641
             IY +A  R + T+D+ Q+K IKD N   L        + ++  + RY       P   +
Sbjct: 64   KIYCLASSRHRATQDIGQVKHIKDANHQTLRDPPARHPQSLERVFLRYLQRGIPSPANPQ 123

Query: 1640 V--TLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLGGVGIS 1467
                 G +              I + E E A+  MK GKA G DDIP E WK LG  G  
Sbjct: 124  CPPVPGPVPP------------ITIKEVETAVKNMKNGKATGPDDIPAEVWKLLGRQGAL 171

Query: 1466 WLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERVIEAR 1287
             L  LFN I++   +P  W  SI +PI+K KGD+   +NYR I+L+SHTMK++E +I+AR
Sbjct: 172  VLASLFNSIIRDGTVPAAWSTSITVPIWKGKGDVAERSNYRPIRLLSHTMKVFEWIIDAR 231

Query: 1286 IRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVNRDIM 1107
            +R   ++  NQ GF+ GR T +AIH  R L E++ E+ + + M F++LEKA+D V  D++
Sbjct: 232  MREIVNLTPNQCGFIRGRGTTDAIHAARLLLEKHREKSKTILMAFLNLEKAFDCVPHDLI 291

Query: 1106 WRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIID 927
            W  L   G+  AY++  K +Y  +++ +R+P G S  F   +G+HQGSALSP LFIL +D
Sbjct: 292  WHSLRSHGVPEAYVNWTKLLYRQVSSVVRSPVGTSPPFNINVGVHQGSALSPLLFILCMD 351

Query: 926  EITKHLQKSIPECMLFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHF 747
              T  LQ   P  +L+ADD+ L DE+R  +  + + W+  L   G  ++  KTEY+E   
Sbjct: 352  TATADLQSPHPWTLLYADDVFLADESRIELQYQTQQWKTCLADFGLRLNTNKTEYLEA-- 409

Query: 746  SKNNRNNETKVKIDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILC 567
                   +  + +DG +++    FKYLGS+I  +G I  DV  RI A W KWR  + +LC
Sbjct: 410  ---GPQTDGTISVDGEDLAKVPHFKYLGSMISNDGVILLDVRARINAAWMKWRQVTGVLC 466

Query: 566  DRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRN 387
            DR++P +LK K YK+ +RP  LYG+ECW    +HEQ + V EMRMLRW  G TR D + N
Sbjct: 467  DRRMPNRLKSKIYKSVVRPVALYGSECWPATAKHEQALHVMEMRMLRWCLGLTRWDHVMN 526

Query: 386  EHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDAPVRRLEGRESLTQIKRGRGRPKKTWK 207
              +R ++G+API +K++E RLR +GHV R   ++ VR         Q +R RGRPK+ W 
Sbjct: 527  TDVRKRMGIAPITDKMQEARLRRYGHVVRSNENSVVR--TALRLSPQGRRPRGRPKRRWM 584

Query: 206  EAIKHDMLYLEINENMAYDRKRWRDMIRIADP 111
            + IK D+  +E +   A DR +WR + R ADP
Sbjct: 585  DRIKDDVKKIEADLTDALDRPKWRRLCRKADP 616


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score =  458 bits (1178), Expect = e-126
 Identities = 224/481 (46%), Positives = 312/481 (64%), Gaps = 3/481 (0%)
 Frame = -1

Query: 1544 MKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDI 1365
            MK  KAVG DDIPIEAWK LG +G+  LT LFN +L T  MP +WR S + PIYK +G +
Sbjct: 1    MKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSV 60

Query: 1364 QNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQY 1185
            Q+C +YRG+K++SHTMKL+ER+I+ R+R E ++ + Q+GF PG  T++AI  IR L E Y
Sbjct: 61   QDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAY 120

Query: 1184 NERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGI 1005
             E+++ LH+ F+DL+KA+D V R  +W  L  +GI  AYID I+DMY    + +RT  G 
Sbjct: 121  REKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGD 180

Query: 1004 SSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKL 825
            +  FP ++GLHQGSALSP+LF +++D ++ ++Q   P  M++ADDI LIDE+R  +  ++
Sbjct: 181  TKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRV 240

Query: 824  EVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEEN 645
             +W+  LE+ G  ++  KTEYM C        +   + I       ++ F+YLGSI+ E+
Sbjct: 241  NLWKGTLENGGLKLNVTKTEYMAC-----GSPDSCTIHIGPEPAVKSEKFRYLGSILHES 295

Query: 644  GEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEH 465
            G I+ DV  RI A W KWR  + ++CDR+IP KLKG  YK+ IRP +LYG+ECW T   H
Sbjct: 296  GGIDHDVQARISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRH 355

Query: 464  EQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDA 285
             Q++ V EM+MLRWMCG TR DRIRN  IR  +GV  + +K++E+RLRW+GHV RRP   
Sbjct: 356  TQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP--- 412

Query: 284  PVRRLEGRESLTQIKRGR---GRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIAD 114
                  G+  L     G    GRP+K W + +K DM    +    A DR +WR + R AD
Sbjct: 413  --ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKAD 470

Query: 113  P 111
            P
Sbjct: 471  P 471


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
            distachyon]
          Length = 567

 Score =  452 bits (1164), Expect = e-124
 Identities = 218/381 (57%), Positives = 285/381 (74%), Gaps = 6/381 (1%)
 Frame = -1

Query: 1235 RSTI--EAIHLIRRL--CEQYNERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAY 1068
            RSTI  E I ++ +    E+Y E+K+DLHMVFIDLEKAYD++ R++MW  LEK  +   Y
Sbjct: 189  RSTIISELIFMLDKAGDLERYKEQKKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKY 248

Query: 1067 IDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPEC 888
            I  IKDMYD + T +RT  G + +FP  IGLHQGSALSPYLF L++DE+T+ +Q  IP C
Sbjct: 249  ITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWC 308

Query: 887  MLFADDIVLIDETREGVNAKLEVWREALESKGFTISRAKTEYMECHFSKNN-RNNETKVK 711
            MLFADD+VL+D++R GVN KLE+WR+ LESKGF +SR KTEYM+C FS       E +V 
Sbjct: 309  MLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVS 368

Query: 710  IDGHEVSITKSFKYLGSIIEENGEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKF 531
            +DG  V    +F+YLGS+++++G+I++DV HRI+AGW KWR AS ILCD+++P KLKGKF
Sbjct: 369  LDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKF 428

Query: 530  YKTAIRPAMLYGAECWATKYEHEQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPI 351
            Y+TAIRPA+LYGAECW TK  H Q++ VAEMRMLRWMCGHTR DR+RN+ IR++VGVAPI
Sbjct: 429  YRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPI 488

Query: 350  DEKIRETRLRWFGHVYRRPLDAPVRRLEGR-ESLTQIKRGRGRPKKTWKEAIKHDMLYLE 174
             EK+ + RLRWFGH+ RRPLDAPV    GR +    +KRGRGRP  TW+E++K D+    
Sbjct: 489  AEKLVQHRLRWFGHIQRRPLDAPVH--SGRLKRAGNVKRGRGRPNLTWEESVKRDLKGWN 546

Query: 173  INENMAYDRKRWRDMIRIADP 111
            I + +A +R  W+  I + +P
Sbjct: 547  ITKELAMNRAAWKLAIHVPEP 567


>emb|CDJ93835.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 480

 Score =  429 bits (1104), Expect = e-117
 Identities = 205/478 (42%), Positives = 313/478 (65%)
 Frame = -1

Query: 1544 MKTGKAVGLDDIPIEAWKCLGGVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDI 1365
            MK+GKA G DD+  + WK  G     WLT+ FN ++  KK+P+ W++S  IPI+K KG +
Sbjct: 1    MKSGKASGPDDVAADLWKSKGWNPAGWLTEFFNQVVAEKKVPESWQQSTTIPIWKKKGSL 60

Query: 1364 QNCANYRGIKLISHTMKLWERVIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQY 1185
             +C  YR I+L+SH+MK++ER++++RIR+   +  NQ GF+   STI+AIH  R L E++
Sbjct: 61   GDCTCYRPIRLLSHSMKIFERIVDSRIRDIVELTTNQCGFVAACSTIDAIHAARLLLEKH 120

Query: 1184 NERKQDLHMVFIDLEKAYDRVNRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGI 1005
             E+++ +H+ F+DLEKA+DRV RD++W  L + G+    I+ ++ +Y    + ++T  G 
Sbjct: 121  REKRRPVHLAFLDLEKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSRVQTAAGT 180

Query: 1004 SSEFPNTIGLHQGSALSPYLFILIIDEITKHLQKSIPECMLFADDIVLIDETREGVNAKL 825
            S+EFP ++G+HQGSALSP LF++++D ITK LQK  P  +L+ADD++L  E +  + +++
Sbjct: 181  SAEFPISVGVHQGSALSPLLFVVVMDTITKDLQKPAPWTLLYADDVMLASEDKSELESQV 240

Query: 824  EVWREALESKGFTISRAKTEYMECHFSKNNRNNETKVKIDGHEVSITKSFKYLGSIIEEN 645
            + W + L   G  ++  KTEY+    S+        +KI+G E++ T +FKYLGS I  +
Sbjct: 241  QTWSDRLAMFGLRLNVKKTEYLTTDSSEPG-----SIKINGTELTRTTTFKYLGSAIASD 295

Query: 644  GEINKDVTHRIQAGWNKWRSASSILCDRKIPLKLKGKFYKTAIRPAMLYGAECWATKYEH 465
            G +  +   R+ A W KWRS + +LCD+ IP +LK K Y+T IRP  +YGAECW    E 
Sbjct: 296  GSLGFETNSRVNAAWLKWRSMTGVLCDKNIPERLKSKIYRTVIRPVAIYGAECWPATKEV 355

Query: 464  EQKMRVAEMRMLRWMCGHTRLDRIRNEHIRNKVGVAPIDEKIRETRLRWFGHVYRRPLDA 285
            E ++ V E +MLRW  G TRLDRI N+ IR + GVAPI +K+RE RLRW+GH  R   D+
Sbjct: 356  EARLSVMETKMLRWTAGVTRLDRISNDAIRERFGVAPIVDKMREARLRWYGHTLRAKNDS 415

Query: 284  PVRRLEGRESLTQIKRGRGRPKKTWKEAIKHDMLYLEINENMAYDRKRWRDMIRIADP 111
             VR++     ++  KR RGRPK+ W + +  D+  + I+ + A++R++WR  IR ADP
Sbjct: 416  -VRKISLNLDVSG-KRPRGRPKQRWLDTLHEDLKAVNIHPDQAFNREKWRQHIRKADP 471