BLASTX nr result
ID: Rehmannia24_contig00003874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00003874
(351 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 76 4e-12
gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [... 72 8e-11
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 70 4e-10
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 66 4e-09
ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260... 66 5e-09
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595... 64 2e-08
ref|XP_006598642.1| PREDICTED: uncharacterized protein LOC102666... 62 6e-08
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 6e-08
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 61 1e-07
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 61 1e-07
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 61 2e-07
ref|XP_004309357.1| PREDICTED: uncharacterized protein LOC101301... 61 2e-07
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 60 2e-07
emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera] 60 4e-07
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 7e-07
gb|ABA96650.1| retrotransposon protein, putative, unclassified [... 59 9e-07
gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japo... 59 9e-07
gb|ABA97681.2| retrotransposon protein, putative, unclassified, ... 59 9e-07
gb|EMJ14051.1| hypothetical protein PRUPE_ppa021445mg [Prunus pe... 58 1e-06
ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266... 58 1e-06
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/114 (29%), Positives = 61/114 (53%)
Frame = -3
Query: 343 FVEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTC 164
F++ERLDR G+ +W + + H+ + S+H+ LLLDSNP + + F F++ WT
Sbjct: 796 FIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTT 855
Query: 163 KEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSIL 2
E + +I+++W G+ M + + + W KE F+N + Q+ +L
Sbjct: 856 HEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLL 909
>gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/112 (31%), Positives = 63/112 (56%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCK 161
++ERLDR S+SW+ +A V H S S+H ++LL+ P +V + RF +D RW +
Sbjct: 47 IQERLDRALASSSWVHRFGEAKVSHHLVSGSDHAVILLEVEPVQVTHRGRFIYDHRWGKE 106
Query: 160 EGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
G ++ +W + +G+ +++ EK+K R ++ W + TN+ +I I
Sbjct: 107 VGCRTAVQDSWRWKCRGSACYRLVEKLKAARGNMRQWRRGAKTNTQCRIREI 158
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = -3
Query: 334 ERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCKEG 155
ERLD FG+ +M + V H+ R S+H L + N ++ K F F WT E
Sbjct: 139 ERLDMVFGNEEFMSLLPNSEVQHLIRQGSDHAPLHVVCNTSQEHVMKPFRFLNFWTKHEN 198
Query: 154 FDQIIEKAWNT-EKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
F ++I W E G P VH K+K+V+M++ W K+TF N +QI ++
Sbjct: 199 FKKLISDVWQEGEITGNPFTVVHSKMKRVKMELAKWSKKTFGNVFQQIATL 249
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = -3
Query: 346 GFVEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKR--FCFDER 173
G ++ERLDR + W +A VHH+ +S+H +LL+++PT ++R F F+
Sbjct: 160 GGIKERLDRVLANCEWRSLFPQATVHHLEPCSSDHLPILLEASPTMKPWRRRSFFRFESM 219
Query: 172 WTCKEGFDQIIEKAWNTEKKGTPMFQVHE-KIKQVRMDILSWGKETFTNSAKQIN 11
WT E + II AWNT GT M+QV + ++D L +E F +++
Sbjct: 220 WTQHEDCESIIANAWNTSFTGTLMYQVSTYHLLMSQLDSLLSREEAFWKQRSKVS 274
>ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260732 [Solanum
lycopersicum]
Length = 333
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/100 (31%), Positives = 54/100 (54%)
Frame = -3
Query: 334 ERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCKEG 155
+RLDR + W+ ++ H++ S+H LL++ K K F F WT +
Sbjct: 119 KRLDRGLANDKWLDKMPHTIITHLSAVGSDHCPLLMEMKDRKDDVIKYFKFLNCWTENDS 178
Query: 154 FDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETF 35
F QI+EK WN + G PM+ +H K+K++ + + +W K+ +
Sbjct: 179 FYQIVEKCWNEKVVGNPMWILHTKMKRLTITLRNWSKKEY 218
>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
Length = 1079
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/100 (32%), Positives = 54/100 (54%)
Frame = -3
Query: 334 ERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCKEG 155
+RLDR ++ W V + V H+ S S+H LL+ T+ K F F WT
Sbjct: 60 KRLDRMLYNSEWFVLFNRTTVTHLAISGSDHAPLLIQFTNTEKVFTKYFKFLNAWTDHPQ 119
Query: 154 FDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETF 35
F +++ K W+ E +G PM+ +H+K+K+ + +W K+T+
Sbjct: 120 FLEVMGKIWSFECQGNPMWILHQKLKRTGSLLSTWSKDTY 159
>ref|XP_006598642.1| PREDICTED: uncharacterized protein LOC102666350 [Glycine max]
Length = 465
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/101 (26%), Positives = 55/101 (54%)
Frame = -3
Query: 346 GFVEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWT 167
G + R+DR G+ W +NL V+ + + S+H LL + +K+ K F F
Sbjct: 299 GTIYSRIDRVLGNLDWFQDNLDTVLTVLPANVSDHSLLCVSRKDPIIKNNKNFRFSNCLI 358
Query: 166 CKEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGK 44
EG++ +++ +W+ +G+PM ++ K+K+++ D+ + K
Sbjct: 359 EMEGYNDMVKASWSKPTRGSPMVRLWNKLKRLQQDMRRFSK 399
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/112 (26%), Positives = 57/112 (50%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCK 161
+ ERLDR S SW++ A + H ++S+H + L+ F F++ W +
Sbjct: 197 IHERLDRGVASTSWLMLFPHAFLKHHIFTSSDHCQISLEYLANNKSKAPPFRFEKMWCTR 256
Query: 160 EGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
+ +D ++++ W T+ G+ MF +K K V+++ W K F N +Q+ +
Sbjct: 257 KDYDSLVKRTWCTKFYGSHMFNFVQKCKLVKINSKEWNKTQFGNIFRQLRQV 308
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKV-KSKKRFCFDERWTC 164
V+ RLDR S +W +AV+ H+T +S+H LLL+ T + + K ++E W
Sbjct: 147 VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWER 206
Query: 163 KEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
+ ++I++AW + + +++K+K ++SW K+ N K+I +
Sbjct: 207 ESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDL 259
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKV-KSKKRFCFDERWTC 164
V+ RLDR S +W +AV+ H+T +S+H LLL+ T + + K ++E W
Sbjct: 172 VKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWER 231
Query: 163 KEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
+ ++I++AW + + +++K+K ++SW K+ N K+I +
Sbjct: 232 ESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDL 284
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/105 (26%), Positives = 52/105 (49%)
Frame = -3
Query: 349 EGFVEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERW 170
E V +RLDR W+ + + + H+ S H LL+++ + + K F F W
Sbjct: 35 EARVWKRLDRAMTKDKWLEHMAQTTITHLPAVGSNHSPLLMENVGREGQQTKYFKFLHCW 94
Query: 169 TCKEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETF 35
E F +++ W E +G PM+++H+K+K++ + W + F
Sbjct: 95 VENENFMHTVKECWEREVQGNPMWKLHQKMKRLASTLSEWSRREF 139
>ref|XP_004309357.1| PREDICTED: uncharacterized protein LOC101301924, partial [Fragaria
vesca subsp. vesca]
Length = 212
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLL-----DSNPTKVKSKKRFCFDE 176
++ERLDRF + +W+ + V H+ S S+H +L+ K K K +F F+E
Sbjct: 47 IKERLDRFVVNRTWLQMFPASKVTHLLPSESDHLPILIHIRRSSGRRKKRKRKNKFRFEE 106
Query: 175 RWTCKEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
W ++ ++E W + P V+ KI R +LSW + F N + I ++
Sbjct: 107 FWLREKDVKDVVEAGWLSGTGSNPFSSVYNKISNTREMLLSWSRTRFGNIQEMIEAV 163
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Frame = -3
Query: 331 RLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCKEGF 152
RLDR G+ W V ++ S+H+ LL + K F FD+RW K GF
Sbjct: 201 RLDRAMGNEEWHSIYSHTNVEYLQHRGSDHKPLLASIQNKPYRPYKHFIFDKRWINKPGF 260
Query: 151 DQIIEKAW--NTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQI 14
+ +++ W + +G P FQ KIK R I W K TN+ K I
Sbjct: 261 KESVQEGWAFPSRGEGVPFFQ---KIKNCRQTISIWKKSNKTNTEKLI 305
>emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera]
Length = 1821
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = -3
Query: 346 GFVEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWT 167
G ++ RLDRF S W A+ +TR S+H +LLD + K K F F+ W
Sbjct: 1021 GALKARLDRFLFSGDWEERVTGAMQCLLTRPVSDHCPILLDCGEVR-KGKSPFRFENMWL 1079
Query: 166 CKEGFDQIIEKAWNTEK-KGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINS 8
EGF +++ W + +G+P F + +K++ ++ D+ W KE+ + + + N+
Sbjct: 1080 RVEGFMDKVKEWWQSYNFRGSPSFVIAKKLQALKHDLKLWNKESLGDVSVKKNA 1133
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = -3
Query: 349 EGFVEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKR---FCFD 179
E + ERLDRF S SW+ +A + H R S+H ++L + ++R F F+
Sbjct: 190 ESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFWFE 249
Query: 178 ERWTCKEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
W + ++++ AWN + G ++ EK+ V ++ W K+TF + K+I ++
Sbjct: 250 TFWLLDDTCEEVVRGAWNAAEGG----RICEKLGAVARELQGWSKKTFGSLRKKIEAV 303
>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1100
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFC--FDERWT 167
V RLDR S SW V +A V H+ S S+H +L+ P + K K C ++ W
Sbjct: 304 VRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDHCPILVQCTPDEDKDKPSRCMRYEILWE 363
Query: 166 CKEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
+E + I AW T + V K+K V + W +E F + K++ ++
Sbjct: 364 REESLSEEIRTAWEQHHAATDLGSVSSKLKLVMGALQHWSREKFGSVNKELGAL 417
>gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japonica Group]
Length = 1003
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFC--FDERWT 167
V RLDR S SW V +A V H+ S S+H +L+ P + K K C ++ W
Sbjct: 270 VRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDHCPILVQCTPDEDKDKPSRCMRYEILWE 329
Query: 166 CKEGFDQIIEKAWNTEKKGTPMFQVHEKIKQVRMDILSWGKETFTNSAKQINSI 5
+E + I AW T + V K+K V + W +E F + K++ ++
Sbjct: 330 REESLSEEIRTAWEQHHAATDLGSVSSKLKLVMGALQHWSREKFGSVNKELGAL 383
>gb|ABA97681.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1047
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = -3
Query: 334 ERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKV-KSKKRFCFDERWTCKE 158
E+LDR S W + V + R S+H LLL++N + V + F F+ W ++
Sbjct: 678 EKLDRILMSTEWEHKFPLSSVVALNRDISDHTPLLLNTNSSSVGNTHHSFKFELGWLLRD 737
Query: 157 GFDQIIEKAWNTEKKG-TPMFQVHEKIKQVRMDILSWGKET 38
GF ++++ W++ +G TPM + EKI+++R + W K T
Sbjct: 738 GFVDMVKEVWSSVNEGNTPMERWQEKIRRLRQHLRGWAKHT 778
>gb|EMJ14051.1| hypothetical protein PRUPE_ppa021445mg [Prunus persica]
Length = 535
Score = 57.8 bits (138), Expect = 1e-06
Identities = 26/88 (29%), Positives = 47/88 (53%)
Frame = -3
Query: 340 VEERLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCK 161
++ERLDR + W+ A +HH+ S+H +LLL + + +++F +D RW
Sbjct: 34 IQERLDRGLATDQWLYLYPDAKIHHLLVVGSDHVMLLLQTQSELKRWQRQFIYDPRWNTT 93
Query: 160 EGFDQIIEKAWNTEKKGTPMFQVHEKIK 77
+GF Q+++ W G+ QV K++
Sbjct: 94 DGFRQLVKDRWGKPFCGSRSVQVVSKLQ 121
>ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266246 [Vitis vinifera]
Length = 2234
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = -3
Query: 331 RLDRFFGSASWMVNNLKAVVHHITRSASEHQLLLLDSNPTKVKSKKRFCFDERWTCKEGF 152
RLDRF + W+ + + + R S+H +LL+ + + F F+ W EGF
Sbjct: 198 RLDRFLATPCWLDQFSRVLNRRLPRPTSDHYPILLEGGGVR-RGPSPFKFENMWLKAEGF 256
Query: 151 DQIIEKAWN-TEKKGTPMFQVHEKIKQVRMDILSWGKETF 35
++I+ W+ E G P +++ K+K ++ ++ +W KE F
Sbjct: 257 QELIKGWWHGIEVSGRPSYRLATKLKGLKQNLKTWNKEVF 296