BLASTX nr result
ID: Rehmannia24_contig00003639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00003639
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma c... 69 4e-11
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera] 72 1e-10
ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloro... 68 1e-10
ref|XP_002531346.1| structural constituent of ribosome, putative... 71 1e-10
ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro... 71 2e-10
ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloro... 69 6e-10
ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citr... 69 6e-10
ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Caps... 68 1e-09
ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloro... 67 1e-09
ref|XP_006848174.1| hypothetical protein AMTR_s00029p00235620 [A... 68 1e-09
ref|XP_006411016.1| hypothetical protein EUTSA_v10017376mg [Eutr... 64 2e-09
gb|EMJ07357.1| hypothetical protein PRUPE_ppa013536mg [Prunus pe... 66 2e-09
ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidop... 67 2e-09
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid... 67 2e-09
ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloro... 67 3e-09
ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloro... 66 4e-09
gb|EXC23677.1| hypothetical protein L484_015587 [Morus notabilis] 63 5e-09
gb|ABR17141.1| unknown [Picea sitchensis] gi|224285069|gb|ACN402... 65 7e-09
gb|ABK23830.1| unknown [Picea sitchensis] 65 7e-09
gb|ABK21808.1| unknown [Picea sitchensis] 65 7e-09
>gb|EOY07263.1| Plastid-specific ribosomal protein 4 [Theobroma cacao]
Length = 121
Score = 68.9 bits (167), Expect(2) = 4e-11
Identities = 34/71 (47%), Positives = 42/71 (59%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
++S+P++P +YCGRGDKKT +GKRFNHSFGN K+DD
Sbjct: 47 TASSPSIPYVYCGRGDKKTKKGKRFNHSFGNARPRNKKKGRGPPRVPIPPSPPRKDKFDD 106
Query: 141 GEVIKIEIDES 109
E IKIEIDES
Sbjct: 107 DEKIKIEIDES 117
Score = 24.3 bits (51), Expect(2) = 4e-11
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 404 MASLLLGAPPMASQS 360
MASLLLGA P+ +QS
Sbjct: 1 MASLLLGAAPVPAQS 15
>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
Length = 117
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
S+++P +P +YCGRGDKKTA+GKRFNHSFGN +++D
Sbjct: 44 SATSPPIPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFED 103
Query: 141 GEVIKIEIDESFAN 100
EV+KIEIDES N
Sbjct: 104 DEVVKIEIDESLFN 117
>ref|XP_004302672.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 117
Score = 68.2 bits (165), Expect(2) = 1e-10
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
+++TP++P +YCGRGDKKT RGKRFNHSFGN K++D
Sbjct: 45 TATTPSVPSVYCGRGDKKTERGKRFNHSFGNARPRNKKKGRGSPRVPVPAAPPKKDKFED 104
Query: 141 GEVIKIEIDESFA 103
V+K+EIDES +
Sbjct: 105 DSVVKVEIDESLS 117
Score = 23.5 bits (49), Expect(2) = 1e-10
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 404 MASLLLGAPPMASQS 360
MASL+LGA P+ SQS
Sbjct: 1 MASLVLGALPIPSQS 15
>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223529044|gb|EEF31030.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 116
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/73 (45%), Positives = 43/73 (58%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
++ST +P +YCGRGDKKTA+GKRFNHSFGN ++D
Sbjct: 44 TASTSPIPFVYCGRGDKKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFED 103
Query: 141 GEVIKIEIDESFA 103
GEV+KI+IDES +
Sbjct: 104 GEVVKIDIDESLS 116
>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
product [Vitis vinifera]
Length = 118
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/74 (45%), Positives = 43/74 (58%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
++S P +P +YCGRGDKKTA+GKRFNHSFGN +++D
Sbjct: 45 ATSPPPIPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFED 104
Query: 141 GEVIKIEIDESFAN 100
EV+KIEIDES N
Sbjct: 105 DEVVKIEIDESLFN 118
>ref|XP_006480988.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Citrus
sinensis]
Length = 144
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
S+ +P++P +YCGRGDKKTA+GKRFNHSFGN ++DD
Sbjct: 70 STPSPSIPYVYCGRGDKKTAKGKRFNHSFGNARPRDKKKGRGPPRVTAPPAPPRKDRFDD 129
Query: 141 GEVIKIEIDES-FAN 100
GE I I++DES F+N
Sbjct: 130 GEKIHIDLDESLFSN 144
>ref|XP_006429326.1| hypothetical protein CICLE_v10013049mg [Citrus clementina]
gi|557531383|gb|ESR42566.1| hypothetical protein
CICLE_v10013049mg [Citrus clementina]
Length = 144
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
S+ +P++P +YCGRGDKKTA+GKRFNHSFGN ++DD
Sbjct: 70 STPSPSIPYVYCGRGDKKTAKGKRFNHSFGNARPRDKKKGRGPPRVTAPPAPPRKDRFDD 129
Query: 141 GEVIKIEIDES-FAN 100
GE I I++DES F+N
Sbjct: 130 GEKIHIDLDESLFSN 144
>ref|XP_006296531.1| hypothetical protein CARUB_v10025723mg [Capsella rubella]
gi|482565239|gb|EOA29429.1| hypothetical protein
CARUB_v10025723mg [Capsella rubella]
Length = 118
Score = 68.2 bits (165), Expect = 1e-09
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 453 SKILFQRPRIHCSILPNGLSLAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGD 274
S IL PR+ +I + LS + S + G + +SS+ ++PL+YCGRGD
Sbjct: 3 SLILGAPPRVTVAISSSRLSSSQSETAGVSL---SCFTQQFSLSASSSSSIPLVYCGRGD 59
Query: 273 KKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDES-FAN 100
+KTA+GKRFNHSFGN K+++ E IKI+IDES F+N
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118
>ref|XP_006355664.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
tuberosum]
Length = 121
Score = 66.6 bits (161), Expect(2) = 1e-09
Identities = 33/70 (47%), Positives = 39/70 (55%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
S + LPLIYCGRGDKKTA+GKRFNHSFGN +DD
Sbjct: 51 SLTDSNLPLIYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRVAAPPAAPKRDPFDD 110
Query: 141 GEVIKIEIDE 112
G+V+KIEI +
Sbjct: 111 GQVVKIEIHD 120
Score = 21.6 bits (44), Expect(2) = 1e-09
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 404 MASLLLGAPPMAS 366
MASLL+G+ PMA+
Sbjct: 1 MASLLVGSVPMAT 13
>ref|XP_006848174.1| hypothetical protein AMTR_s00029p00235620 [Amborella trichopoda]
gi|548851479|gb|ERN09755.1| hypothetical protein
AMTR_s00029p00235620 [Amborella trichopoda]
Length = 120
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = -2
Query: 411 LPNGLSLAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGDKKTARGKRFNHSFG 232
L + SL++ + GF L +S+ P P ++CGRGD+KTA+GKRF+HSFG
Sbjct: 17 LSSRASLSFKPNFGFS-LSNVSPSSSSLSMASTAPLYPSVFCGRGDRKTAKGKRFSHSFG 75
Query: 231 NXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDES-FAN 100
N ++DDGEV+KI+IDES F+N
Sbjct: 76 NARPRNKKKGRGPPRVPAPPLPPKKDRFDDGEVVKIQIDESIFSN 120
>ref|XP_006411016.1| hypothetical protein EUTSA_v10017376mg [Eutrema salsugineum]
gi|557112185|gb|ESQ52469.1| hypothetical protein
EUTSA_v10017376mg [Eutrema salsugineum]
Length = 149
Score = 63.9 bits (154), Expect(2) = 2e-09
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -2
Query: 318 SSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDG 139
SS+ ++PL+YCGRGD+KTA+GKRFNHSFGN K+++
Sbjct: 76 SSSSSIPLVYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFEND 135
Query: 138 EVIKIEIDES-FAN 100
+ IKI+IDES F+N
Sbjct: 136 DKIKIDIDESLFSN 149
Score = 23.5 bits (49), Expect(2) = 2e-09
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 404 MASLLLGAPP 375
MASLLLGAPP
Sbjct: 28 MASLLLGAPP 37
>gb|EMJ07357.1| hypothetical protein PRUPE_ppa013536mg [Prunus persica]
Length = 117
Score = 65.9 bits (159), Expect(2) = 2e-09
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
+++TP +P +YCGRGDKKT RGKRFNHS+GN K++D
Sbjct: 45 TATTPLVPSVYCGRGDKKTERGKRFNHSYGNARPRNKNKGRGPPRVPVPVAPPKKDKFED 104
Query: 141 GEVIKIEIDESFA 103
V+K+EIDES +
Sbjct: 105 DTVVKVEIDESLS 117
Score = 21.6 bits (44), Expect(2) = 2e-09
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 404 MASLLLGAPPMASQS 360
MASL+LGA P+ +Q+
Sbjct: 1 MASLILGALPIPTQT 15
>ref|NP_181349.1| plastid-specific ribosomal protein 4 [Arabidopsis thaliana]
gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
ribosomal protein S31, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 4;
Short=PSRP-4; Flags: Precursor
gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
ribosomal protein 4 precursor [Arabidopsis thaliana]
gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
[Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
At2g38140/F16M14.7 [Arabidopsis thaliana]
gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
[Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
ribosomal protein S31 [Arabidopsis thaliana]
gi|330254400|gb|AEC09494.1| plastid-specific ribosomal
protein 4 [Arabidopsis thaliana]
Length = 118
Score = 67.0 bits (162), Expect = 2e-09
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -2
Query: 453 SKILFQRPRIHCSILPNGLSLAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGD 274
S IL PR+ ++ + LS + S + G + +SS+ ++PL+YCGRGD
Sbjct: 3 SLILGAPPRVTVALPSSRLSSSHSETAGVSL---SCFTHQFSLSTSSSSSIPLVYCGRGD 59
Query: 273 KKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDES-FAN 100
+KTA+GKRFNHSFGN K+++ E IKI+IDES F+N
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118
>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/115 (35%), Positives = 59/115 (51%)
Frame = -2
Query: 453 SKILFQRPRIHCSILPNGLSLAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGD 274
S IL PR+ ++ + LS + S + G + +SS+ ++PL+YCGRGD
Sbjct: 3 SLILGAPPRVTVALSSSRLSSSHSETAGVSL---SCSTHQFSLSTSSSSSIPLVYCGRGD 59
Query: 273 KKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDES 109
+KTA+GKRFNHSFGN K+++ E IKI+IDES
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDIDES 114
>ref|XP_004147884.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Cucumis
sativus] gi|449520074|ref|XP_004167059.1| PREDICTED: 30S
ribosomal protein S31, chloroplastic-like [Cucumis
sativus]
Length = 118
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/70 (50%), Positives = 39/70 (55%)
Frame = -2
Query: 318 SSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDDG 139
SS ++P IYCGRGDKKT RGKRFNHS+GN K+DD
Sbjct: 45 SSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDN 104
Query: 138 EVIKIEIDES 109
E IKIEIDES
Sbjct: 105 EKIKIEIDES 114
>ref|XP_004239932.1| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Solanum
lycopersicum]
Length = 121
Score = 66.2 bits (160), Expect(2) = 4e-09
Identities = 32/70 (45%), Positives = 39/70 (55%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
S + LPL+YCGRGDKKTA+GKRFNHSFGN +DD
Sbjct: 51 SLTDSNLPLVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRVAAPPAAPKRDPFDD 110
Query: 141 GEVIKIEIDE 112
G+V+KIEI +
Sbjct: 111 GQVVKIEIHD 120
Score = 20.4 bits (41), Expect(2) = 4e-09
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 404 MASLLLGAPPMAS 366
MASLL+G+ PM++
Sbjct: 1 MASLLVGSVPMST 13
>gb|EXC23677.1| hypothetical protein L484_015587 [Morus notabilis]
Length = 122
Score = 62.8 bits (151), Expect(2) = 5e-09
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -2
Query: 321 SSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXXXXXXXXXXXXXXXXXXXXXXKYDD 142
++S P+ P +YCGRGDKKT RGKRFNHS+GN K+D
Sbjct: 48 ATSPPSFPSVYCGRGDKKTERGKRFNHSYGNARPRNKKKGRGPPRVPVPPSPPRKDKFDS 107
Query: 141 GEVIKIEIDES-FAN 100
IKIEIDES F+N
Sbjct: 108 DAKIKIEIDESLFSN 122
Score = 23.5 bits (49), Expect(2) = 5e-09
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 404 MASLLLGAPPMASQS 360
MASLLLG+ P+ SQS
Sbjct: 1 MASLLLGSLPIPSQS 15
>gb|ABR17141.1| unknown [Picea sitchensis] gi|224285069|gb|ACN40262.1| unknown
[Picea sitchensis] gi|224287004|gb|ACN41203.1| unknown
[Picea sitchensis]
Length = 112
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/96 (38%), Positives = 44/96 (45%)
Frame = -2
Query: 393 LAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXX 214
L SS G P+ +S P +YCGRGDK+TA+GKRF HSFGN
Sbjct: 15 LLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRD 74
Query: 213 XXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDESF 106
+DDGE I+IEIDESF
Sbjct: 75 NKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDESF 110
>gb|ABK23830.1| unknown [Picea sitchensis]
Length = 112
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/96 (38%), Positives = 44/96 (45%)
Frame = -2
Query: 393 LAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXX 214
L SS G P+ +S P +YCGRGDK+TA+GKRF HSFGN
Sbjct: 15 LLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRD 74
Query: 213 XXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDESF 106
+DDGE I+IEIDESF
Sbjct: 75 NKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDESF 110
>gb|ABK21808.1| unknown [Picea sitchensis]
Length = 112
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/96 (38%), Positives = 44/96 (45%)
Frame = -2
Query: 393 LAWSSSHGFPILXXXXXXXXXXXXSSSTPTLPLIYCGRGDKKTARGKRFNHSFGNXXXXX 214
L SS G P+ +S P +YCGRGDK+TA+GKRF HSFGN
Sbjct: 15 LLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRFKHSFGNARPRD 74
Query: 213 XXXXXXXXXXXXXXXXXXXXKYDDGEVIKIEIDESF 106
+DDGE I+IEIDESF
Sbjct: 75 NKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDESF 110