BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00003529
         (1133 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   483   e-134
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   478   e-132
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   455   e-125
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   437   e-120
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   437   e-120
gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus pe...   434   e-119
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   422   e-115
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   422   e-115
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   421   e-115
gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, ...   421   e-115
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   419   e-115
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   417   e-114
gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [...   414   e-113
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   411   e-112
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   407   e-111
ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [A...   405   e-110
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   403   e-110
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   403   e-110
gb|EPS61841.1| hypothetical protein M569_12954, partial [Genlise...   397   e-108

>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Solanum lycopersicum]
          Length = 414

 Score =  483 bits (1242), Expect = e-134
 Identities = 250/352 (71%), Positives = 281/352 (79%), Gaps = 9/352 (2%)
 Frame = +3

Query: 84   LHLSKTSFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSG-----PDSESAD 248
            LHL++ +    RRH+RT ITSS S+ +T+FNITFA                  P+S+S  
Sbjct: 18   LHLTRAT-PYTRRHIRTFITSSLSSSSTKFNITFAPPKPKPKTKPEPAIPIINPNSDSNS 76

Query: 249  SSISDL----GDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXX 416
             S+ +L    GDQLYIPWIVRDE GNLTLQ+TPP R L  +A+ ST              
Sbjct: 77   DSVPNLDAEVGDQLYIPWIVRDEKGNLTLQSTPPARLLHEMANAST-GKKKKKGKEVASK 135

Query: 417  VKPTAPSVEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGS 596
                 P+ EPK+SKAARRFYNE FR+PPQRL+KVLAAAGVASRRSSEELIFQG+VTVNGS
Sbjct: 136  AATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGS 195

Query: 597  VCNTPQTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDF 776
            VC TPQTKVDP RDVIYVNGNRL KKLP KVYLALNKPKGYICSSGEKETKSVMSLFDDF
Sbjct: 196  VCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDF 255

Query: 777  VKSWNKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGA 956
            +KSW+K++PG PKPRLFTVGRLDVATTGLIIVTNDGEF +++SHPSSNLSKEYIATI+G 
Sbjct: 256  IKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGE 315

Query: 957  VNKRHLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            V+KRHLI ISEGT+I+GVHCTPD VELLP QPD+SRPRLRIVVHEGRNHEVR
Sbjct: 316  VHKRHLIAISEGTIIDGVHCTPDNVELLPGQPDLSRPRLRIVVHEGRNHEVR 367


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  478 bits (1230), Expect = e-132
 Identities = 245/340 (72%), Positives = 272/340 (80%), Gaps = 8/340 (2%)
 Frame = +3

Query: 117  RRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXX--------SGPDSESADSSISDLGD 272
            R H+RT ITSS S+ +T+FNITFA                   S  DS S  +  +++GD
Sbjct: 28   RLHIRTFITSSLSSSSTKFNITFAPPKPKPKPKPEPAIPINSDSDSDSNSVPNLEAEIGD 87

Query: 273  QLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPSVEPKY 452
            QLYIPWIVRDE GNLTLQ+TPP R L  +A+ ST                   P+ EPK+
Sbjct: 88   QLYIPWIVRDEKGNLTLQSTPPARLLHEMANASTSKKKKKGKEVASKAAT-VVPTPEPKH 146

Query: 453  SKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDPG 632
            SKAARRFYNE FR+PPQRL+KVLAAAGVASRRSSEELIFQG+VTVNGSVC TPQTKVDP 
Sbjct: 147  SKAARRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPA 206

Query: 633  RDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGLP 812
            RDVIYVNGNRL KKLP KVYLALNKPKGYICSSGEKETKSVMSLFDDF+KSW+K++PG P
Sbjct: 207  RDVIYVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQP 266

Query: 813  KPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISEG 992
            KPRLFTVGRLDVATTGLIIVTNDGEF +++SHPSSNLSKEYIATI+G V+KRHLI ISEG
Sbjct: 267  KPRLFTVGRLDVATTGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIAISEG 326

Query: 993  TVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            TVI+GVHC PD VELLP QPD+SRPRLRIVVHEGRNHEVR
Sbjct: 327  TVIDGVHCIPDNVELLPGQPDLSRPRLRIVVHEGRNHEVR 366


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  455 bits (1171), Expect = e-125
 Identities = 239/346 (69%), Positives = 272/346 (78%), Gaps = 4/346 (1%)
 Frame = +3

Query: 87   HLSKTSFILPRRHLRTV-ITSSFS---TKTTEFNITFAXXXXXXXXXXXSGPDSESADSS 254
            HLS+ S  L RRH RT+ + SS S   T + EFNI+FA             P SE+    
Sbjct: 23   HLSRPS--LARRHFRTIPVRSSISPPSTTSAEFNISFAPKSKNPK------PQSET---- 70

Query: 255  ISDLGDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAP 434
                   L IPWIVRDENGNL +Q+TPPER+L+ +A                      A 
Sbjct: 71   -------LLIPWIVRDENGNLRVQSTPPERYLQDMAKAKALSAKKKKKKEESTA---RAV 120

Query: 435  SVEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQ 614
            +VEPKYSKAARRFYNE FR+PPQRL+KVLAAAGVASRR+SEELIF+G+VTVNGSVCNTPQ
Sbjct: 121  AVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQ 180

Query: 615  TKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNK 794
            T+VDP RD+IYVNGNRL KKLPPKVYLALNKPKGYICSSGEKE+KSV+ LFDD++KSWNK
Sbjct: 181  TRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNK 240

Query: 795  KNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHL 974
            +NPG+PKPR+FTVGRLDVATTGLII+TNDG+FA K+SHPSS LSKEYIATI+G VNKRHL
Sbjct: 241  QNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHL 300

Query: 975  ITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            I ISEGTVIEGVHCTPD VELLP QP+IS+PRLR+VVHEGRNHEVR
Sbjct: 301  IAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVR 346


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  437 bits (1123), Expect = e-120
 Identities = 231/341 (67%), Positives = 257/341 (75%), Gaps = 4/341 (1%)
 Frame = +3

Query: 102  SFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLY 281
            S  + R   R+ IT S S+   +FNI+FA              D ES + S      QL+
Sbjct: 24   SLCIHRTFPRSRITCSSSS--LQFNISFAPPKRKKTQQD----DFESGEGS----EQQLF 73

Query: 282  IPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTA----PSVEPK 449
            IPWIVR E+GNL LQT PP R +  LA   TQ                 A    P   PK
Sbjct: 74   IPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPK 133

Query: 450  YSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDP 629
             SKAARRFYN+ FR+ P+RL+KVLAAAGVASRRSSEELIFQG+VTVNGSVCNTPQT+VDP
Sbjct: 134  LSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDP 193

Query: 630  GRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGL 809
             RD+IYVNG RL KKLPPKVYLALNKPKGYICS+GEKE KSVMSLFDD++KSW+K+NPGL
Sbjct: 194  ARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGL 253

Query: 810  PKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISE 989
            P+PRLFTVGRLDVATTGLIIVTNDG+FA  VSHPSS L KEYIATI+GAVNKRHLI ISE
Sbjct: 254  PRPRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISE 313

Query: 990  GTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            GTVIEG HCTPD+VELLP QPDI RPR+RIVVHEGRNHEVR
Sbjct: 314  GTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVR 354


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
            gi|557538690|gb|ESR49734.1| hypothetical protein
            CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  437 bits (1123), Expect = e-120
 Identities = 231/341 (67%), Positives = 257/341 (75%), Gaps = 4/341 (1%)
 Frame = +3

Query: 102  SFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLY 281
            S  + R   R+ IT S S+   +FNI+FA              D ES + S      QL+
Sbjct: 74   SLCIHRTFPRSRITCSSSS--LQFNISFAPPKRKKTQQD----DFESGEGS----EQQLF 123

Query: 282  IPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTA----PSVEPK 449
            IPWIVR E+GNL LQT PP R +  LA   TQ                 A    P   PK
Sbjct: 124  IPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPK 183

Query: 450  YSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDP 629
             SKAARRFYN+ FR+ P+RL+KVLAAAGVASRRSSEELIFQG+VTVNGSVCNTPQT+VDP
Sbjct: 184  LSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDP 243

Query: 630  GRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGL 809
             RD+IYVNG RL KKLPPKVYLALNKPKGYICS+GEKE KSVMSLFDD++KSW+K+NPGL
Sbjct: 244  ARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGL 303

Query: 810  PKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISE 989
            P+PRLFTVGRLDVATTGLIIVTNDG+FA  VSHPSS L KEYIATI+GAVNKRHLI ISE
Sbjct: 304  PRPRLFTVGRLDVATTGLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISE 363

Query: 990  GTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            GTVIEG HCTPD+VELLP QPDI RPR+RIVVHEGRNHEVR
Sbjct: 364  GTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVR 404


>gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  434 bits (1117), Expect = e-119
 Identities = 226/334 (67%), Positives = 261/334 (78%)
 Frame = +3

Query: 111  LPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLYIPW 290
            LPR  +   +++S S+ + EFNITFA             PDS   D     L  QL IPW
Sbjct: 30   LPR--ITCSLSTSSSSSSLEFNITFAPSKPKPKLK----PDSAEPDPEA--LAGQLIIPW 81

Query: 291  IVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPSVEPKYSKAARR 470
            IVR E+GNL LQ+ PP RFL+A+  +S                +   P+ EPKYSKAARR
Sbjct: 82   IVRGEDGNLKLQSHPPARFLQAIETKSKTKKKKEG-------AEKRVPTAEPKYSKAARR 134

Query: 471  FYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDPGRDVIYV 650
            FYNE FR+  QRL+KVLAAAGVASRRSSE+LIF GKVTVNGSVCNTPQ++VDPGRD+IYV
Sbjct: 135  FYNENFRDASQRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQSRVDPGRDIIYV 194

Query: 651  NGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGLPKPRLFT 830
            NGNRL K+LPPKVYLALNKPKGYIC+SGE   KSV+SLF+D++K+W+K+N G+P+PRLFT
Sbjct: 195  NGNRLPKRLPPKVYLALNKPKGYICASGEN--KSVLSLFEDYLKTWDKRNSGIPRPRLFT 252

Query: 831  VGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISEGTVIEGV 1010
            VGRLDVATTGLIIVTNDG+FA K+SHPSSNLSKEYIA I G V+KRHL+ ISEGTVIEGV
Sbjct: 253  VGRLDVATTGLIIVTNDGDFAQKISHPSSNLSKEYIAAIEGVVSKRHLLAISEGTVIEGV 312

Query: 1011 HCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            HCTPD VELLPQQPD+SRPRLRIVVHEGRNHEVR
Sbjct: 313  HCTPDSVELLPQQPDMSRPRLRIVVHEGRNHEVR 346


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
            gi|550332354|gb|EEE89362.2| hypothetical protein
            POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  422 bits (1084), Expect = e-115
 Identities = 224/345 (64%), Positives = 253/345 (73%), Gaps = 2/345 (0%)
 Frame = +3

Query: 84   LHLSKTSFILPRRHL-RTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSIS 260
            LH   T F  P   L    I  +  T + EFNITFA              D+    +S+S
Sbjct: 10   LHHQLTFFRKPSLSLLNKSIRPTRITASLEFNITFAPPKPKPKLPANLQTDA----ASLS 65

Query: 261  DLGDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAP-S 437
                QL+IPWIVR E+GNL LQ+ PP R + A+A   TQ                 A   
Sbjct: 66   LPPGQLFIPWIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLE 125

Query: 438  VEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQT 617
             EP  SKAARRFYNE FR+  QRL+KVLAAAGVASRRSSE LIF+GKVTVNGSVCNTPQT
Sbjct: 126  AEPTRSKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQT 185

Query: 618  KVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKK 797
            +VDPGRD IYVNGNRL KKLPPK+Y+ALNKPKGYICS GEKE+KSVM L DD+ +SW+K+
Sbjct: 186  RVDPGRDAIYVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKR 245

Query: 798  NPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLI 977
            NPGLPKPRLFTVGRLDVATTGLIIVTNDG+FA +++HPSSNLSKEYIAT++G V+KRHL 
Sbjct: 246  NPGLPKPRLFTVGRLDVATTGLIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRHLF 305

Query: 978  TISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
             +SEGTVIEGV C PD VELLPQQPD  RPRLRIVVHEGRNHEVR
Sbjct: 306  AVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVR 350


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  422 bits (1084), Expect = e-115
 Identities = 225/348 (64%), Positives = 260/348 (74%)
 Frame = +3

Query: 84   LHLSKTSFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISD 263
            L   ++  + P R L  +  SS    + EFNITFA             PD  S  +S S 
Sbjct: 15   LFFKRSLSLTPFRTLPRLTCSS----SLEFNITFAPAPKPK-------PDPNSLPASSSS 63

Query: 264  LGDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPSVE 443
             G QL+IPWIVR E+G L LQ+ PP R L  +A   T+              K    + E
Sbjct: 64   SGQQLFIPWIVRGEDGKLKLQSHPPARLLHEMAQADTKTKSKKNKDTAQK--KQRVLTAE 121

Query: 444  PKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKV 623
            PK+SKAARRFYNE FRE  QRL+KVLAAAGVASRRSSE+LIF GKVTVNGSVCNTPQT V
Sbjct: 122  PKHSKAARRFYNENFRES-QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPV 180

Query: 624  DPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNP 803
            DPGRD+IYVNGNRL KKLPPKVYLALNKPKGYIC++GEK  KSV+SLFDD++KSW+K+NP
Sbjct: 181  DPGRDIIYVNGNRLPKKLPPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWDKRNP 238

Query: 804  GLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITI 983
            G P+PRLFTVGRLDVATTGLI+VTNDG+FA  +SHPS+NL+KEYIA I G+V+K+ LI I
Sbjct: 239  GTPRPRLFTVGRLDVATTGLIVVTNDGDFAQSISHPSANLTKEYIAVIEGSVSKKSLIAI 298

Query: 984  SEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVRAV*SK 1127
            SEGTVI+GVHCTPD VELLPQQP+ISR RLRIVVHEGRNHEVR +  K
Sbjct: 299  SEGTVIDGVHCTPDSVELLPQQPEISRSRLRIVVHEGRNHEVRELVKK 346


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  421 bits (1083), Expect = e-115
 Identities = 222/355 (62%), Positives = 258/355 (72%), Gaps = 12/355 (3%)
 Frame = +3

Query: 84   LHLSKTSFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISD 263
            L LS  S     RH+   +  S S+ T+EFNI+FA             P++   DS    
Sbjct: 20   LSLSSLSLRPSIRHILPRVLCSLSSSTSEFNISFAPAKPKPQ------PEATEVDSLFGA 73

Query: 264  LGDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPS-- 437
             G QL+IPWI+R ++GNL LQ+ PP R L A+AH  T+              KPTA    
Sbjct: 74   DGSQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKK---------KPTAAEKK 124

Query: 438  ----------VEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTV 587
                       EPKYSKAARRFYNE FRE  QRL+KVLAAAGVASRR+SEELI +G+VTV
Sbjct: 125  KKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVTV 184

Query: 588  NGSVCNTPQTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLF 767
            NGSVCNTPQT+VDP +DVIYVNGNRL K+LPPKVYLALNKPKGYICS G+K  KSVMSLF
Sbjct: 185  NGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMSLF 242

Query: 768  DDFVKSWNKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATI 947
            DD++K W+K+N G  KPRLFTVGRLDVATTGLIIVTNDG+FA K+SHPSSNLSKEYIATI
Sbjct: 243  DDYLKIWDKRNLGQSKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLSKEYIATI 302

Query: 948  NGAVNKRHLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
             G V+K+HL+ ISEGT I+GVHC PD VELLP QP++ RPRLR+VVH+GR HEVR
Sbjct: 303  EGTVSKKHLLVISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVR 357


>gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
            cacao]
          Length = 398

 Score =  421 bits (1082), Expect = e-115
 Identities = 225/349 (64%), Positives = 257/349 (73%), Gaps = 8/349 (2%)
 Frame = +3

Query: 90   LSKTSFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSE----SADSSI 257
            LS   F+ P R L  + +SS    + +FNITFA               ++     ++S  
Sbjct: 7    LSLPPFLRPIRALPPITSSS----SLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPP 62

Query: 258  SDLGDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTA-- 431
                 QL+IPWIVR E+GNL LQ  PP R + ALA   TQ              + +A  
Sbjct: 63   LPSNGQLFIPWIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVG 122

Query: 432  -PSVEP-KYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCN 605
              SVEP K SKAARRFYNE F EPPQRL+KVLAAAGVASRR SEELIF GKVTVNGSVCN
Sbjct: 123  NASVEPPKLSKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCN 182

Query: 606  TPQTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKS 785
             PQT+VDP +D+IYVNG+RL KKLPPK+YLALNKPKGYICSSGEKE KSV+ LF+D++K 
Sbjct: 183  APQTRVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKR 242

Query: 786  WNKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNK 965
            W+K N G PKPRLFTVGRLDVATTGLIIVTNDG+FA K+SHPSSNL+KEYIATI+G V K
Sbjct: 243  WDKMNRGSPKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKK 302

Query: 966  RHLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            RHLI ISEGT IEG+HC PD VELLP+QPD+SRPRLRIVVHEGRNHEVR
Sbjct: 303  RHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVR 351


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  419 bits (1078), Expect = e-115
 Identities = 222/327 (67%), Positives = 253/327 (77%), Gaps = 4/327 (1%)
 Frame = +3

Query: 144  SSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSI---SDLGDQLYIPWIVRDENGN 314
            SS S+ + EFNITFA             P SE  D       + G QL+IPWIVR E+GN
Sbjct: 41   SSSSSSSLEFNITFAPPKPK--------PKSEVEDPFQFIDRNSGGQLFIPWIVRGEDGN 92

Query: 315  LTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPSVEP-KYSKAARRFYNERFR 491
            L LQ+ PP RFL +++   T+             V    P  EP K+SKAARRFYNE  R
Sbjct: 93   LKLQSHPPTRFLHSVSEDETKPKKKK--------VSAGKPITEPPKHSKAARRFYNENIR 144

Query: 492  EPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDPGRDVIYVNGNRLAK 671
            E  QRL+KVLAAAGVASRRSSEELIF G+VTVNGSVCNTPQT+VDP RD+IYVNGNRL K
Sbjct: 145  ESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPK 204

Query: 672  KLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGLPKPRLFTVGRLDVA 851
            KLPPKVYLALNKPKGYICSSG+KE+KSV+SLFDD++KSW+K  PG PKPRLFTVGRLDVA
Sbjct: 205  KLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVA 264

Query: 852  TTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISEGTVIEGVHCTPDLV 1031
            TTGLIIVTNDG+FA  +SHPSS LSKEYIA I+G V+K++LI ISEGT+I+GVHCTPD V
Sbjct: 265  TTGLIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSV 324

Query: 1032 ELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            ELLP+QPDIS+ RLRIVVHEGRNHEVR
Sbjct: 325  ELLPRQPDISKSRLRIVVHEGRNHEVR 351


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
            gi|557112308|gb|ESQ52592.1| hypothetical protein
            EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  417 bits (1072), Expect = e-114
 Identities = 216/343 (62%), Positives = 257/343 (74%), Gaps = 8/343 (2%)
 Frame = +3

Query: 114  PRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLG-DQLYIPW 290
            P R LR  ++SS S++  EF+ITFA             P   +  S+    G  QL+IPW
Sbjct: 29   PIRTLRCSLSSSSSSEPLEFDITFA-------------PPKPTPSSTRGGAGVQQLFIPW 75

Query: 291  IVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVK-----PTAPSV--EPK 449
            IVR E+G L +Q+ PP R + ALA  +TQ                    P++P+   +PK
Sbjct: 76   IVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSASTPSSPASHSKPK 135

Query: 450  YSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDP 629
             SKAARRFYNE F++PPQRL+KVLAAAGVASRR+SEELIF GKVTVNGS+C  PQ +VDP
Sbjct: 136  LSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAPQIRVDP 195

Query: 630  GRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGL 809
             RD+IYVNGNR+ KKLPPKVY ALNKPKGYICSSGEKE KSV+SLFDDF+ SW+K+NPG 
Sbjct: 196  TRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWDKRNPGT 255

Query: 810  PKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISE 989
            PKPRLFTVGRLDVATTGLI+VTNDG+FA K+SHPSS+L KEYI T+ G V+KRHL+TISE
Sbjct: 256  PKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDVHKRHLMTISE 315

Query: 990  GTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVRAV 1118
            GT++EGVHC PD VEL+P+Q DI R RLRIVVHEGRNHEVR +
Sbjct: 316  GTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVREI 358


>gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  414 bits (1065), Expect = e-113
 Identities = 225/355 (63%), Positives = 257/355 (72%), Gaps = 14/355 (3%)
 Frame = +3

Query: 90   LSKTSFILPRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSE----SADSSI 257
            LS   F+ P R L  + +SS    + +FNITFA               ++     ++S  
Sbjct: 56   LSLPPFLRPIRALPPITSSS----SLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPP 111

Query: 258  SDLGDQLYIPWIVRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTA-- 431
                 QL+IPWIVR E+GNL LQ  PP R + ALA   TQ              + +A  
Sbjct: 112  LPSNGQLFIPWIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVG 171

Query: 432  -PSVEP-KYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCN 605
              SVEP K SKAARRFYNE F EPPQRL+KVLAAAGVASRR SEELIF GKVTVNGSVCN
Sbjct: 172  NASVEPPKLSKAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCN 231

Query: 606  TPQ------TKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLF 767
             PQ      T+VDP +D+IYVNG+RL KKLPPK+YLALNKPKGYICSSGEKE KSV+ LF
Sbjct: 232  APQASDNLQTRVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLF 291

Query: 768  DDFVKSWNKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATI 947
            +D++K W+K N G PKPRLFTVGRLDVATTGLIIVTNDG+FA K+SHPSSNL+KEYIATI
Sbjct: 292  EDYLKRWDKMNRGSPKPRLFTVGRLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATI 351

Query: 948  NGAVNKRHLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            +G V KRHLI ISEGT IEG+HC PD VELLP+QPD+SRPRLRIVVHEGRNHEVR
Sbjct: 352  DGEVKKRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVR 406


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  411 bits (1056), Expect = e-112
 Identities = 211/348 (60%), Positives = 254/348 (72%), Gaps = 15/348 (4%)
 Frame = +3

Query: 114  PRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLYIPWI 293
            P R LR  ++SS S++  EF+I+FA             P  + + +       QL+IPWI
Sbjct: 30   PIRTLRCSVSSSSSSEPIEFDISFAP------------PKPKPSSTRGGATPQQLFIPWI 77

Query: 294  VRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPS------------ 437
            VR ++G L LQ+ PP R +  LA  +T               + T+ S            
Sbjct: 78   VRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATASASSPAS 137

Query: 438  ---VEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNT 608
               V+PK SKAARRFYNE F+EPPQRL+KVLAAAGVASRR+SEELIF GKVTVNG +CNT
Sbjct: 138  HSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNT 197

Query: 609  PQTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSW 788
            PQT+VDP RD+IYVNGNR+ KKLPPKVY ALNKPKGYICSSGEKE KSV+SLFD+++ SW
Sbjct: 198  PQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLSSW 257

Query: 789  NKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKR 968
            +K+NPG PKPRLFTVGRLDVATTGLI+VTNDG+FA K+SHPSS+L KEYI T+ G ++KR
Sbjct: 258  DKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKR 317

Query: 969  HLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            HL+ ISEGT++EGVHC PD VEL+P+Q DI R RLRIVVHEGRNHEVR
Sbjct: 318  HLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 365


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  407 bits (1047), Expect = e-111
 Identities = 195/228 (85%), Positives = 217/228 (95%)
 Frame = +3

Query: 429  APSVEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNT 608
            A +VEPKYSKAARRFYNE FR+PPQRL+KVLAAAGVASRR+SEELIF+G+VTVNGSVCNT
Sbjct: 22   AVAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNT 81

Query: 609  PQTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSW 788
            PQT+VDP RD+IYVNGNRL KKLPPKVYLALNKPKGYICSSGEKE+KSV+ LFDD++KSW
Sbjct: 82   PQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSW 141

Query: 789  NKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKR 968
            NK+NPG+PKPR+FTVGRLDVATTGLII+TNDG+FA K+SHPSS LSKEYIATI+G VNKR
Sbjct: 142  NKQNPGVPKPRIFTVGRLDVATTGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKR 201

Query: 969  HLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            HLI ISEGTVIEGVHCTPD VELLP QP+IS+PRLR+VVHEGRNHEVR
Sbjct: 202  HLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVR 249


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
            gi|482562896|gb|EOA27086.1| hypothetical protein
            CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  407 bits (1046), Expect = e-111
 Identities = 212/348 (60%), Positives = 253/348 (72%), Gaps = 15/348 (4%)
 Frame = +3

Query: 114  PRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLYIPWI 293
            P R LR  ++SS  ++  EF+I+FA             P   S    +S    QL+IPWI
Sbjct: 76   PIRTLRCSVSSS--SEPLEFDISFAPPK----------PKPASTRGGVSP--QQLFIPWI 121

Query: 294  VRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTA-------------- 431
            VR ++G L LQ+ PP R + +LA  +T               + T+              
Sbjct: 122  VRGDDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASSSASASSP 181

Query: 432  -PSVEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNT 608
             P   PK SKAARRFYNE F+EPPQRL+KVLAAAGVASRR+SEELIF GKVTVNG +CNT
Sbjct: 182  PPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNT 241

Query: 609  PQTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSW 788
            PQT+VDP RD+IYVNGNR+ KKLPPKVY ALNKPKGYICSSGEKE KSV+SLFD+++ SW
Sbjct: 242  PQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDEYMASW 301

Query: 789  NKKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKR 968
            +K+NPG PKPRLFTVGRLDVATTGLIIVTNDG+FA ++SHPSS+L KEYI T+ G ++KR
Sbjct: 302  DKRNPGTPKPRLFTVGRLDVATTGLIIVTNDGDFAQQLSHPSSSLPKEYITTVVGDIHKR 361

Query: 969  HLITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            HL+ ISEGT++EGVHC PDLVEL+P+Q DI R RLRIVVHEGRNHEVR
Sbjct: 362  HLMAISEGTIVEGVHCVPDLVELMPKQHDIPRARLRIVVHEGRNHEVR 409


>ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [Amborella trichopoda]
            gi|548852364|gb|ERN10492.1| hypothetical protein
            AMTR_s00161p00064200 [Amborella trichopoda]
          Length = 403

 Score =  405 bits (1041), Expect = e-110
 Identities = 212/334 (63%), Positives = 246/334 (73%), Gaps = 4/334 (1%)
 Frame = +3

Query: 129  RTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESA----DSSISDLGDQLYIPWIV 296
            R V     S+ +T+FNITF               DS S+       +      L+IPWIV
Sbjct: 43   RNVPLIKASSASTQFNITFGARKKENPSPEMGEQDSSSSIKAPQKELPSQPAPLFIPWIV 102

Query: 297  RDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPSVEPKYSKAARRFY 476
            +DENGNL +Q+TPP   L A+A  ST               K  + S EPK+SKAARRFY
Sbjct: 103  KDENGNLKIQSTPPAHILSAMAEASTAKKTKKKKEGGS---KSGSLSAEPKHSKAARRFY 159

Query: 477  NERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDPGRDVIYVNG 656
            N+ FREP QRL+KVLA+AGVASRRSSEELIF GKVTVNGSVCN PQT+VDP +DVIYVNG
Sbjct: 160  NQNFREP-QRLSKVLASAGVASRRSSEELIFDGKVTVNGSVCNVPQTRVDPIKDVIYVNG 218

Query: 657  NRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGLPKPRLFTVG 836
            +RLAKKLPPK+Y ALNKPKGYICSS EKE+KSV+ LFDD+ KSWNK NPG+PKPRLFTVG
Sbjct: 219  SRLAKKLPPKLYFALNKPKGYICSSSEKESKSVLMLFDDYWKSWNKINPGIPKPRLFTVG 278

Query: 837  RLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISEGTVIEGVHC 1016
            RLDVATTGLIIVTNDG+FA +++HPSS L KEYIA I G V++RHL  IS+GT++EG HC
Sbjct: 279  RLDVATTGLIIVTNDGDFAQRIAHPSSGLKKEYIAAIEGNVHRRHLQLISDGTIVEGKHC 338

Query: 1017 TPDLVELLPQQPDISRPRLRIVVHEGRNHEVRAV 1118
            TPDLVE LP QP  SR RLRIVV+EGRN EVR +
Sbjct: 339  TPDLVEHLPAQPGSSRSRLRIVVNEGRNREVREI 372


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cicer arietinum]
          Length = 410

 Score =  403 bits (1036), Expect = e-110
 Identities = 210/336 (62%), Positives = 247/336 (73%), Gaps = 8/336 (2%)
 Frame = +3

Query: 129  RTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLYIPWIVRDEN 308
            RT+   + S+   +FNI+F+             P +ES +    D   QL IPWIVR E+
Sbjct: 27   RTLPRFTCSSSPFKFNISFSPSKPKPNPKPE--PQTESPNQFPDDNEGQLIIPWIVRGED 84

Query: 309  GNLTLQTTPPERFLKALAHQST--------QXXXXXXXXXXXXXVKPTAPSVEPKYSKAA 464
            GN  L + PP  FLKA+A+  T        Q             V+ TAP   P+YSKAA
Sbjct: 85   GNFKLLSEPPPSFLKAMANDKTGTKKSDKNQTTKNKKKSENETKVRATAP---PQYSKAA 141

Query: 465  RRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTKVDPGRDVI 644
            RRFYNE F++   RL+KVLAA+GVASRRS E+LIF+GKVTVNGSVCNTPQT+VDP +DVI
Sbjct: 142  RRFYNENFKDSGTRLSKVLAASGVASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVI 201

Query: 645  YVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKNPGLPKPRL 824
            YVNG+RL K+ P KVYLALNKPKGYICSSGEKE+KSV+SLFDDF+ SW+KK+PG+P PRL
Sbjct: 202  YVNGSRLPKRQPHKVYLALNKPKGYICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRL 261

Query: 825  FTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLITISEGTVIE 1004
            FTVGRLDVATTGL+IVTNDG+FA ++SHPSSN SKEYIAT+NG V+KRHL  ISEGT IE
Sbjct: 262  FTVGRLDVATTGLLIVTNDGDFAQRLSHPSSNFSKEYIATVNGLVHKRHLTAISEGTTIE 321

Query: 1005 GVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            GVHC PD VELLP  PD  R RLRIVVH+GR HEVR
Sbjct: 322  GVHCVPDSVELLPSMPDAQRARLRIVVHDGRKHEVR 357


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
            gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana]
            gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis
            thaliana] gi|330254545|gb|AEC09639.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 410

 Score =  403 bits (1035), Expect = e-110
 Identities = 210/347 (60%), Positives = 252/347 (72%), Gaps = 14/347 (4%)
 Frame = +3

Query: 114  PRRHLRTVITSSFSTKTTEFNITFAXXXXXXXXXXXSGPDSESADSSISDLGDQLYIPWI 293
            P R LR  ++SS S++  EF+I+FA             P   S    ++    QL+IPWI
Sbjct: 30   PIRTLRCSVSSS-SSEPIEFDISFAPPK----------PKPSSTHGGVTP--QQLFIPWI 76

Query: 294  VRDENGNLTLQTTPPERFLKALAHQSTQXXXXXXXXXXXXXVKPTAPS------------ 437
            VR ++G L LQ+ PP R +  LA  +T               + T+ S            
Sbjct: 77   VRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTTASSPASH 136

Query: 438  --VEPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTP 611
              V+PK SKAARRFYNE F+E PQRL+KVLAAAGVASRR+SEELIF GKVTVNG +CNTP
Sbjct: 137  SEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTP 196

Query: 612  QTKVDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWN 791
            QT+VDP RD+IYVNGNR+ KKLPPKVY ALNKPKGYICSSGEKE KS +SLFD+++ SW+
Sbjct: 197  QTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSSWD 256

Query: 792  KKNPGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRH 971
            K+NPG PKPRLFTVGRLDVATTGLI+VTNDG+FA K+SHPSS+L KEYI T+ G ++KRH
Sbjct: 257  KRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRH 316

Query: 972  LITISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            L+ ISEGT++EGVHC PD VEL+P+Q DI R RLRIVVHEGRNHEVR
Sbjct: 317  LMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 363


>gb|EPS61841.1| hypothetical protein M569_12954, partial [Genlisea aurea]
          Length = 273

 Score =  397 bits (1019), Expect = e-108
 Identities = 191/224 (85%), Positives = 211/224 (94%)
 Frame = +3

Query: 441  EPKYSKAARRFYNERFREPPQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCNTPQTK 620
            EPK+SKAARRFYNERFREPPQRLAKVLA+AGVASRRS EELIFQGKV+VNGSVC TPQT+
Sbjct: 1    EPKFSKAARRFYNERFREPPQRLAKVLASAGVASRRSCEELIFQGKVSVNGSVCKTPQTR 60

Query: 621  VDPGRDVIYVNGNRLAKKLPPKVYLALNKPKGYICSSGEKETKSVMSLFDDFVKSWNKKN 800
            VDPG+DVIYVNG RLAKKLPPKVYLALNKPKGYICS GEKETKSV+SL DDF KSW ++N
Sbjct: 61   VDPGQDVIYVNGCRLAKKLPPKVYLALNKPKGYICSVGEKETKSVISLLDDFTKSWRRRN 120

Query: 801  PGLPKPRLFTVGRLDVATTGLIIVTNDGEFANKVSHPSSNLSKEYIATINGAVNKRHLIT 980
            PG+P+PRLFTVGRLDVAT+GLIIVTNDGEFANK+SHPSSNLSKEYIATING V+K+ L+T
Sbjct: 121  PGVPQPRLFTVGRLDVATSGLIIVTNDGEFANKISHPSSNLSKEYIATINGTVSKQSLLT 180

Query: 981  ISEGTVIEGVHCTPDLVELLPQQPDISRPRLRIVVHEGRNHEVR 1112
            IS+GT I+GVHCTPD VELLP QPD+S+PR+RIVVHEGR HEVR
Sbjct: 181  ISKGTTIDGVHCTPDSVELLPPQPDVSKPRIRIVVHEGRKHEVR 224