BLASTX nr result
ID: Rehmannia24_contig00003440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00003440
(333 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466352.1| PREDICTED: serine hydroxymethyltransferase, ... 88 1e-15
ref|XP_006426223.1| hypothetical protein CICLE_v10025372mg [Citr... 88 1e-15
sp|P49358.1|GLYM2_FLAPR RecName: Full=Serine hydroxymethyltransf... 87 2e-15
ref|XP_004981838.1| PREDICTED: serine hydroxymethyltransferase, ... 86 4e-15
sp|P49357.1|GLYM1_FLAPR RecName: Full=Serine hydroxymethyltransf... 86 5e-15
ref|XP_006379386.1| hypothetical protein POPTR_0008s00350g [Popu... 85 9e-15
ref|XP_006379385.1| hypothetical protein POPTR_0008s00350g [Popu... 85 9e-15
ref|XP_002310916.2| Serine hydroxymethyltransferase family prote... 85 9e-15
gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides] 85 9e-15
gb|ACG33140.1| serine hydroxymethyltransferase [Zea mays] gi|224... 82 1e-13
gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Po... 82 1e-13
ref|XP_003559966.1| PREDICTED: serine hydroxymethyltransferase, ... 81 2e-13
gb|EEE59895.1| hypothetical protein OsJ_12499 [Oryza sativa Japo... 81 2e-13
dbj|BAG94588.1| unnamed protein product [Oryza sativa Japonica G... 81 2e-13
gb|ABR25558.1| serine hydroxymethyltransferase mitochondrial pre... 81 2e-13
ref|NP_001051211.1| Os03g0738400 [Oryza sativa Japonica Group] g... 81 2e-13
gb|ABF98773.1| Serine hydroxymethyltransferase, mitochondrial pr... 81 2e-13
gb|AAP44712.1| putative glycine hydroxymethyltransferase [Oryza ... 81 2e-13
ref|XP_006651801.1| PREDICTED: serine hydroxymethyltransferase, ... 80 2e-13
ref|XP_006466351.1| PREDICTED: serine hydroxymethyltransferase, ... 80 2e-13
>ref|XP_006466352.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Citrus sinensis]
Length = 515
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T QSA+FQSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 470 KLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 515
>ref|XP_006426223.1| hypothetical protein CICLE_v10025372mg [Citrus clementina]
gi|567867205|ref|XP_006426225.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
gi|557528213|gb|ESR39463.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
gi|557528215|gb|ESR39465.1| hypothetical protein
CICLE_v10025372mg [Citrus clementina]
Length = 517
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T QSA+FQSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 472 KLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 517
>sp|P49358.1|GLYM2_FLAPR RecName: Full=Serine hydroxymethyltransferase 2, mitochondrial;
Short=SHMT2; AltName: Full=Glycine
hydroxymethyltransferase 2; AltName: Full=Serine
methylase 2; Flags: Precursor gi|437997|emb|CAA81079.1|
glycine hydroxymethyltransferase [Flaveria pringlei]
Length = 517
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV MQS++FQSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 472 KLKDFVAAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
>ref|XP_004981838.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Setaria italica]
Length = 513
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFVTT+QS S Q+EI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 468 KLKDFVTTLQSDSIQAEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 513
>sp|P49357.1|GLYM1_FLAPR RecName: Full=Serine hydroxymethyltransferase 1, mitochondrial;
Short=SHMT1; AltName: Full=Glycine
hydroxymethyltransferase 1; AltName: Full=Serine
methylase 1; Flags: Precursor gi|437995|emb|CAA81078.1|
glycine hydroxymethyltransferase [Flaveria pringlei]
Length = 517
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFVT M+S++ QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 472 KLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
>ref|XP_006379386.1| hypothetical protein POPTR_0008s00350g [Populus trichocarpa]
gi|550332062|gb|ERP57183.1| hypothetical protein
POPTR_0008s00350g [Populus trichocarpa]
Length = 547
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDF+ TMQSA FQSEI KLRH+VEEYAKQFPTIGF KETMKYKN
Sbjct: 502 KLKDFLVTMQSAHFQSEISKLRHEVEEYAKQFPTIGFNKETMKYKN 547
>ref|XP_006379385.1| hypothetical protein POPTR_0008s00350g [Populus trichocarpa]
gi|550332061|gb|ERP57182.1| hypothetical protein
POPTR_0008s00350g [Populus trichocarpa]
Length = 510
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDF+ TMQSA FQSEI KLRH+VEEYAKQFPTIGF KETMKYKN
Sbjct: 465 KLKDFLVTMQSAHFQSEISKLRHEVEEYAKQFPTIGFNKETMKYKN 510
>ref|XP_002310916.2| Serine hydroxymethyltransferase family protein [Populus
trichocarpa] gi|134142067|gb|ABO61377.1| mitochondrial
serine hydroxymethyltransferase [Populus tremuloides]
gi|550332063|gb|EEE88283.2| Serine
hydroxymethyltransferase family protein [Populus
trichocarpa]
Length = 520
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDF+ TMQSA FQSEI KLRH+VEEYAKQFPTIGF KETMKYKN
Sbjct: 475 KLKDFLVTMQSAHFQSEISKLRHEVEEYAKQFPTIGFNKETMKYKN 520
>gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 520
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDF+ TMQSA FQSEI KLRH+VEEYAKQFPTIGF KETMKYKN
Sbjct: 475 KLKDFLVTMQSAHFQSEISKLRHEVEEYAKQFPTIGFNKETMKYKN 520
>gb|ACG33140.1| serine hydroxymethyltransferase [Zea mays]
gi|224030737|gb|ACN34444.1| unknown [Zea mays]
gi|414872684|tpg|DAA51241.1| TPA: serine
hydroxymethyltransferase isoform 1 [Zea mays]
gi|414872685|tpg|DAA51242.1| TPA: serine
hydroxymethyltransferase isoform 2 [Zea mays]
Length = 513
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S Q EI KLRHDVEE+AKQFPTIGFEKETMKYKN
Sbjct: 468 KLKDFVATLQSDSIQVEIAKLRHDVEEFAKQFPTIGFEKETMKYKN 513
>gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
Length = 520
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDF+ T + FQSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 475 KLKDFLATQSAPHFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 520
>ref|XP_003559966.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Brachypodium distachyon]
Length = 514
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQS-ASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS +S Q+EI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 468 KLKDFVATLQSDSSIQAEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 514
>gb|EEE59895.1| hypothetical protein OsJ_12499 [Oryza sativa Japonica Group]
Length = 489
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/47 (87%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQSAS-FQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 443 KLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 489
>dbj|BAG94588.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765838|dbj|BAG87535.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767360|dbj|BAG99588.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 427
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/47 (87%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQSAS-FQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 381 KLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 427
>gb|ABR25558.1| serine hydroxymethyltransferase mitochondrial precursor [Oryza
sativa Indica Group]
Length = 61
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/47 (87%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQSAS-FQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 15 KLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 61
>ref|NP_001051211.1| Os03g0738400 [Oryza sativa Japonica Group]
gi|108710977|gb|ABF98772.1| Serine
hydroxymethyltransferase, mitochondrial precursor,
putative, expressed [Oryza sativa Japonica Group]
gi|113549682|dbj|BAF13125.1| Os03g0738400 [Oryza sativa
Japonica Group] gi|218193723|gb|EEC76150.1| hypothetical
protein OsI_13440 [Oryza sativa Indica Group]
gi|385717692|gb|AFI71281.1| serine
hydroxymethyltransferase [Oryza sativa Japonica Group]
Length = 513
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/47 (87%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQSAS-FQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 467 KLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 513
>gb|ABF98773.1| Serine hydroxymethyltransferase, mitochondrial precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 464
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/47 (87%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQSAS-FQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 418 KLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 464
>gb|AAP44712.1| putative glycine hydroxymethyltransferase [Oryza sativa Japonica
Group]
Length = 557
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/47 (87%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQSAS-FQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS S QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 511 KLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 557
>ref|XP_006651801.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Oryza brachyantha]
Length = 511
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/47 (85%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 KLKDFVTTMQS-ASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T+QS + QSEI KLRHDVEEYAKQFPTIGFEKETMKYKN
Sbjct: 465 KLKDFVATLQSDGNIQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 511
>ref|XP_006466351.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Citrus sinensis]
Length = 515
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1
Query: 1 KLKDFVTTMQSASFQSEIEKLRHDVEEYAKQFPTIGFEKETMKYKN 138
KLKDFV T QSA+FQSEI K HDVEEYAKQFPTIGFEKETMKYK+
Sbjct: 470 KLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIGFEKETMKYKS 515