BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00003306
         (1961 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       612   e-172
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              550   e-153
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   539   e-150
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   536   e-149
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   531   e-148
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   529   e-147
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   521   e-145
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...   520   e-145
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   515   e-143
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   514   e-143
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   514   e-143
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          509   e-141
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...   506   e-140
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...   504   e-140
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   499   e-138
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252...   474   e-131
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5...   472   e-130
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...   469   e-129
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor...   462   e-127
gb|ABU45208.1| unknown [Solanum bulbocastanum]                        455   e-125

>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  612 bits (1577), Expect = e-172
 Identities = 325/586 (55%), Positives = 398/586 (67%), Gaps = 6/586 (1%)
 Frame = +3

Query: 9    EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 188
            E EDE+VREIDVY +P +DP T+LYVLQYPLR  WRPYELD RCEEVRVK  S EVE+DL
Sbjct: 102  EGEDEIVREIDVYLTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDL 161

Query: 189  TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPL 368
             V VDSKNYDS ADPRV M KQ LT+SW+P   +GYAVGVL GNKLHLNPIHAV QLRP 
Sbjct: 162  AVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPS 221

Query: 369  MEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYH 548
            M+H   + SK ++   SN+ D  K EE   G             EQ KD+ EDW+PL YH
Sbjct: 222  MQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYH 281

Query: 549  GASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLPLK 728
            GA SD++  Y++KM+  + S I FSM ++DY+N+LCPGTS+    S GPS RVLL+LPL+
Sbjct: 282  GARSDISMSYVRKMVEHDSSHIQFSM-NHDYVNTLCPGTSNENNGSNGPS-RVLLSLPLE 339

Query: 729  ERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGI 908
            ERFRTWLLQGPP+HRFDALKHL  D SVE++L VL  HA++VQGLW+PKSSL+YG DQGI
Sbjct: 340  ERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGI 399

Query: 909  KVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSF 1085
              LARDYVLLLFS+  II +SQLP   KL  AM+DVL+ +A +R +  DWK KE PD +F
Sbjct: 400  DALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTF 459

Query: 1086 VKSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKSD----TTTNPATSKSSSKVTART 1250
            +K NP +V++Q        K+I + I G +N P  K+     TT NPATSKS SK  + +
Sbjct: 460  IKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNS 519

Query: 1251 PKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAV 1430
                  R  MSEE REA+ KALQKLF+S K+C FQQI Q LR+MAVSES+R  GFAREA+
Sbjct: 520  LNAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFAREAI 578

Query: 1431 VAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLK 1610
             AA+ ++A P+ELQ II+QVA+NIHG+ V KSSP +P++D F                  
Sbjct: 579  AAAHGVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEF------------------ 620

Query: 1611 KATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 1748
                                   V+QELC+SQGSAW+L+S  GN K
Sbjct: 621  -----------------------VVQELCVSQGSAWVLKSGDGNPK 643


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  550 bits (1416), Expect = e-153
 Identities = 304/591 (51%), Positives = 386/591 (65%), Gaps = 13/591 (2%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPC-VDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLT 191
            ED VVREIDV+F+P   D  T++YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL+
Sbjct: 99   EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158

Query: 192  VYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
            + VDSKNYD  A    +MKKQ L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP M
Sbjct: 159  IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218

Query: 372  EHVDSKESKSKSVGPSNVNDTVK----SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPL 539
            E++ S  +K K+    + N  VK    +EE   G             EQ  D+ E WVPL
Sbjct: 219  EYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPL 278

Query: 540  KYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLC-PGTSSGGFSSKGPSIRVLLT 716
            KYH + SD + RYLQKM+A + S I F MS  +Y+NSLC PG S+    SKG S R LL+
Sbjct: 279  KYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLS 338

Query: 717  LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 896
            +PL+ERF+T L +GPPVHRF ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++  
Sbjct: 339  MPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPG 398

Query: 897  DQGIKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELP 1073
             QG+  LARDY+LLLFSK  +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  
Sbjct: 399  GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPT 458

Query: 1074 DFSFVKSNPSVVKKQXXXXXXXXKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSK 1235
            D SF+K +P +V++Q        K I D I  GGR GP      K        TS  S  
Sbjct: 459  DVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDG 518

Query: 1236 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 1415
             T  T      RTAMS E REA+ KAL+++F+  K+CSFQ I Q LRD+AVS+S      
Sbjct: 519  ATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVD 578

Query: 1416 AREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVP 1595
             R  V AA   DA  +EL  II++ A  +HG+ V K+S ++ +++P RKVV+DLF  + P
Sbjct: 579  PRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEP 637

Query: 1596 NAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 1748
            NAKLK+A I+EA+K+ LK+EI+  EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 638  NAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 688


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  539 bits (1389), Expect = e-150
 Identities = 301/589 (51%), Positives = 385/589 (65%), Gaps = 11/589 (1%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPC-VDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLT 191
            ED VVREIDV+F+P   D  T++YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL+
Sbjct: 99   EDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLS 158

Query: 192  VYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
            + VDSKNYD  A    +MKKQ L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP M
Sbjct: 159  IDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSM 218

Query: 372  EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDS--EEDWVPLKY 545
            E++ S  +K K+    + N  VK E   E              E++  S  ++ WVPLKY
Sbjct: 219  EYLSSGGAKRKNNVTGDTNSAVKLEVSNE--------------EESVGSLKKQSWVPLKY 264

Query: 546  HGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLC-PGTSSGGFSSKGPSIRVLLTLP 722
            H + SD + RYLQKM+A + S I F MS  +Y+NSLC PG S+    SKG S R LL++P
Sbjct: 265  HSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMP 324

Query: 723  LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 902
            L+ERF+T L +GPPVHRF ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   Q
Sbjct: 325  LEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQ 384

Query: 903  GIKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1079
            G+  LARDY+LLLFSK  +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D 
Sbjct: 385  GVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDV 444

Query: 1080 SFVKSNPSVVKKQXXXXXXXXKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVT 1241
            SF+K +P +V++Q        K I D I  GGR GP      K        TS  S   T
Sbjct: 445  SFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGAT 504

Query: 1242 ARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAR 1421
              T      RTAMS E REA+ KAL+++F+  K+CSFQ I Q LRD+AVS+S       R
Sbjct: 505  RATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPR 564

Query: 1422 EAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 1601
              V AA   DA  +EL  II++ A  +HG+ V K+S ++ +++P RKVV+DLF  + PNA
Sbjct: 565  TFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNA 623

Query: 1602 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 1748
            KLK+A I+EA+K+ LK+EI+  EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 624  KLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 672


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  536 bits (1380), Expect = e-149
 Identities = 294/582 (50%), Positives = 389/582 (66%), Gaps = 8/582 (1%)
 Frame = +3

Query: 18   DEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVY 197
            DEVVREIDV  +P  DP T+LYV QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + 
Sbjct: 92   DEVVREIDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151

Query: 198  VDSKNYDSGADPRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
            +DSKN+D  +     +KKQ+L+TSW P  +  SGYAVGVL G+KLHLNP+HAV QLRP  
Sbjct: 152  LDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSK 211

Query: 372  EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHG 551
             ++   E K K+V  +N   +V++E+ +E                 KD  E W+ LKYHG
Sbjct: 212  RNLKESELK-KNVTTNNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHG 270

Query: 552  ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLPLKE 731
            A SD++ RYLQKM   E S + FSMS  DYLN+  PG  +     K    R L  LPL+E
Sbjct: 271  ARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEE 329

Query: 732  RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 911
            R RTWLL+GPP+HRFDALKHL  D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++
Sbjct: 330  RVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVE 389

Query: 912  VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1088
            VLAR++VL  F+K ++IK S      +   A    L  LAV+R +  DWKLKE PD  F 
Sbjct: 390  VLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFE 449

Query: 1089 KSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN 1265
                 VV+++        K IND + GGRN P     T  NP    +         K  +
Sbjct: 450  NLYGDVVREKQATWECLGKQINDVLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTS 504

Query: 1266 S---RTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 1436
            S   RT+MSEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A
Sbjct: 505  SSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITA 564

Query: 1437 ANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKK 1613
            +  + DA  +E+Q +INQVAVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE P+AKLKK
Sbjct: 565  SIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKK 624

Query: 1614 ATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 1739
            A++ EA+K++L R+I+ +E+ KV++ELC S+ SAW+LRS  G
Sbjct: 625  ASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  531 bits (1369), Expect = e-148
 Identities = 290/585 (49%), Positives = 389/585 (66%), Gaps = 11/585 (1%)
 Frame = +3

Query: 18   DEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVY 197
            DE+VREIDV  +P  DP T+LYV QYPL+  WRPYEL++RC+EVR++P++ E+E+DL + 
Sbjct: 92   DEIVREIDVCINPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151

Query: 198  VDSKNYDSGADPRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
            +DSKN+D  +     +KKQ+L+TSW P  +  SGYAVGVL G+KLHLNP+HAV QLRP  
Sbjct: 152  LDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSK 211

Query: 372  EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHG 551
             ++   E K K++  +N   +V++E+ +E                 KD  E W+ LKYHG
Sbjct: 212  RNLKESELK-KNIITNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHG 270

Query: 552  ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLPLKE 731
            A SD++ RYLQKM   E S + FSMS  DYLN+ CPG  +     K    R L  LPL+E
Sbjct: 271  ARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEE 329

Query: 732  RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 911
            R R WLL+GPP+HRFDAL HL  D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++
Sbjct: 330  RVRIWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVE 389

Query: 912  VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1088
            VLAR++VL  F+K ++IK S      +   A    L  LAV+R +  DWKLKE PD  F 
Sbjct: 390  VLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFE 449

Query: 1089 KSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKS------DTTTNPATSKSSSKVTAR 1247
                 VV++Q        K IND + GGR  P  K+      D T  P+  K +S    R
Sbjct: 450  NLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLR 509

Query: 1248 TPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREA 1427
            T        +MSEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S    G  R+A
Sbjct: 510  T--------SMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKA 561

Query: 1428 VVAANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAK 1604
            + A+  + DA  +E+Q +INQVAVNIHG+ V KSSPDNPQYD  RK+VIDLF+AE P+AK
Sbjct: 562  ITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAK 621

Query: 1605 LKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 1739
            LKKA++ EA+K++L R+I+ +E+ KV++ELC S+ SAW+LRS  G
Sbjct: 622  LKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  529 bits (1363), Expect = e-147
 Identities = 291/582 (50%), Positives = 388/582 (66%), Gaps = 8/582 (1%)
 Frame = +3

Query: 18   DEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVY 197
            DEVVREIDV  +P  DP T+LYV QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + 
Sbjct: 92   DEVVREIDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAID 151

Query: 198  VDSKNYDSGADPRVQMKKQILTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
            +DSKN+D  +     +KKQ+L+TSW P  +  SGYAVGVL G+KLHLNP+HAV QLRP  
Sbjct: 152  LDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSK 211

Query: 372  EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHG 551
             ++   E K K+V  +N   +V++E+ +E                    ++ W+ LKYHG
Sbjct: 212  RNLKESELK-KNVTTNNDEKSVENEDVKE------------KRPMGPSKKQHWLHLKYHG 258

Query: 552  ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLPLKE 731
            A SD++ RYLQKM   E S + FSMS  DYLN+  PG  +     K    R L  LPL+E
Sbjct: 259  ARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEE 317

Query: 732  RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 911
            R RTWLL+GPP+HRFDALKHL  D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++
Sbjct: 318  RVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVE 377

Query: 912  VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1088
            VLAR++VL  F+K ++IK S      +   A    L  LAV+R +  DWKLKE PD  F 
Sbjct: 378  VLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFE 437

Query: 1089 KSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN 1265
                 VV+++        K IND + GGRN P     T  NP    +         K  +
Sbjct: 438  NLYGDVVREKQATWECLGKQINDVLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTS 492

Query: 1266 S---RTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 1436
            S   RT+MSEE+REA+ KALQ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A
Sbjct: 493  SSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITA 552

Query: 1437 ANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKK 1613
            +  + DA  +E+Q +INQVAVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE P+AKLKK
Sbjct: 553  SIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKK 612

Query: 1614 ATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 1739
            A++ EA+K++L R+I+ +E+ KV++ELC S+ SAW+LRS  G
Sbjct: 613  ASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGDG 654


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
            gi|550334731|gb|EEE90658.2| hypothetical protein
            POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  521 bits (1341), Expect = e-145
 Identities = 283/585 (48%), Positives = 379/585 (64%), Gaps = 6/585 (1%)
 Frame = +3

Query: 3    EVEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEI 182
            E + +D VVREIDVY++P VDP T+LYV+QYPLR  WRPYELD+RC+EVRVKP S EVE+
Sbjct: 104  EEDEDDVVVREIDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEV 163

Query: 183  DLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLR 362
            DL++  D+KNYD     R+ MKKQ L++SW P   +GYAVGVL GNKLHLNPIHAV QLR
Sbjct: 164  DLSID-DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLR 222

Query: 363  PLMEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLK 542
            P M+++ S  SK K    S  +    +E    G             EQ  D EE W+PLK
Sbjct: 223  PSMDYLSSGNSKGKKNATSGEDS---NEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLK 279

Query: 543  YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLP 722
            YHG+ SDL+ RYLQ M+A E S I F+M+  DY++SLCPG S+      GPS RVLL+LP
Sbjct: 280  YHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLP 339

Query: 723  LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT-- 896
            L+ER +   L+GPP+HRF AL+HLI ++S+E++L VLQ++ ++VQGLWVPK+SL++    
Sbjct: 340  LEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPK 399

Query: 897  -DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKDVLNVLAVKRDNFKDWKLKELP 1073
              + +K+ ARDY+LLLFSK++++  S+L        +K  LN+ AV+R +FKDWK KE  
Sbjct: 400  PTEKVKLAARDYILLLFSKSLVVTPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENV 459

Query: 1074 DFSFVKSNPSVVKKQXXXXXXXXKIINDTIGGRNGPGKKSDTTTNPATSKSSSKVTARTP 1253
            D  FV+  P +V+KQ        K I+                      KS SK     P
Sbjct: 460  DTLFVELYPDIVRKQEQAWEVMGKNISAAF---------------DRAGKSVSKNVITKP 504

Query: 1254 KVANSRTAMSEEVREAITKALQKLFKSVKIC--SFQQISQLLRDMAVSESARSTGFAREA 1427
            K       M++E REA+ KAL K+ ++ K+C   FQ I Q LR +A+S+S       R A
Sbjct: 505  K-----KTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQSTLPKADPRIA 559

Query: 1428 VVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPF-RKVVIDLFVAEVPNAK 1604
            V AA+  +A P+ELQ +I++VA NIHG  V KSSP++P +DP  RKVVI LF+A  PNA 
Sbjct: 560  VAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVIGLFLARGPNAN 619

Query: 1605 LKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 1739
            +KK+ +  A+++ELKRE S  EY KV+ +LC S+GSAW+L+S  G
Sbjct: 620  IKKSEVQAAARLELKREPSNSEYIKVMTDLCESKGSAWVLKSGDG 664


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  520 bits (1340), Expect = e-145
 Identities = 290/589 (49%), Positives = 381/589 (64%), Gaps = 12/589 (2%)
 Frame = +3

Query: 9    EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 188
            E ED VVREIDV+F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL
Sbjct: 116  EEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDL 175

Query: 189  TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPL 368
             V VDS NYDS    R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP 
Sbjct: 176  AVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPS 235

Query: 369  MEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEEDWVP 536
            M H+    SK K+   ++   TVK EEP +    G             EQ  D +E WVP
Sbjct: 236  MCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVP 295

Query: 537  LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLT 716
            LKYH + +D + +YLQ+MMA E  +I F+MS  DY++SLCPG S+    ++GPS R+LL+
Sbjct: 296  LKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLS 354

Query: 717  LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 896
            +PL+ER +  L +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  
Sbjct: 355  IPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPE 414

Query: 897  DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLK 1064
            D   K LARDYVLLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLK
Sbjct: 415  DP-YKSLARDYVLLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLK 471

Query: 1065 ELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSK 1235
            E  D  F K  P +VK Q          + + I  G + GP + K  T   P  + +S K
Sbjct: 472  ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDK 531

Query: 1236 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 1415
               R      +   MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S      
Sbjct: 532  GVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKAD 591

Query: 1416 AREAVVAANSIDAYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFRKVVIDLFVAEV 1592
            AR  V AA   DA   ELQ ++++VAV +H G+ V +SSP++P+YDP R+VVI+L   + 
Sbjct: 592  ARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK- 650

Query: 1593 PNAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGG 1739
               KLKKA +  A+ + LKREIS  EY KV+ + C  + S W+L+S  G
Sbjct: 651  --GKLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGDG 697


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  515 bits (1327), Expect = e-143
 Identities = 282/569 (49%), Positives = 374/569 (65%), Gaps = 9/569 (1%)
 Frame = +3

Query: 3    EVEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEI 182
            E E ED +VREIDV+F+P +D  T+LYV+QYPLR  WRPYELD+RCEEVRVKP S EVE+
Sbjct: 110  EEEEEDMIVREIDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEV 169

Query: 183  DLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLR 362
            DLT+  DS N+D     +   KKQ L+TS+ P  V+GYAVGVL GNKLHLNPIHAV QLR
Sbjct: 170  DLTID-DSSNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLR 228

Query: 363  PLMEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLK 542
            P +EHV+S +SK K+   + +N  VK E+  EG                   ++ W+ LK
Sbjct: 229  PSLEHVNSNDSKRKN--SATLNPEVKLEDSNEGKPIG------------SSKKQCWISLK 274

Query: 543  YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLP 722
            YHG+ SD + RYL+KM+A+E S + F+M+  DY++SLCP  S+    SKGP  R LL+LP
Sbjct: 275  YHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLP 334

Query: 723  LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 902
            L ER +  +L+GPPV RF  LKH   D+SVE+VL+VLQ++ ++VQGLW PKSSL++  D 
Sbjct: 335  LAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDA 393

Query: 903  GIKVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1079
              K   RDYVLLLFSKN++I  SQ+    K+   +K  LN+ AV+R +FKDWK KE  D 
Sbjct: 394  NSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDT 453

Query: 1080 SFVKSNPSVVKKQXXXXXXXXKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTART 1250
            +F+K  P +VKKQ        K ++     R+G     +    P    ++ K        
Sbjct: 454  TFIKLYPDIVKKQEEAWDNTEKRLSKVFD-RSGKASMKNAIPKPPMVHNTVKHLDSEKSM 512

Query: 1251 PKVAN-----SRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 1415
            PK+A+     ++T ++ E REA+ KAL K+F+S K+CSFQ I Q LRD+AVS+S      
Sbjct: 513  PKIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKAD 572

Query: 1416 AREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVP 1595
             R AV AA+  DA P+ELQ II+QVA NIHG  V KSSP++PQYD  RKV+IDL +A  P
Sbjct: 573  PRIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGP 632

Query: 1596 NAKLKKATILEASKMELKREISQIEYQKV 1682
            NAKLKKA + EA+++  KR+++ IEY K+
Sbjct: 633  NAKLKKAEVFEAARLAFKRDVTNIEYNKL 661


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  514 bits (1325), Expect = e-143
 Identities = 286/589 (48%), Positives = 371/589 (62%), Gaps = 11/589 (1%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 194
            ED VVREIDV F+P VD  ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVE+DL V
Sbjct: 117  EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176

Query: 195  YVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLME 374
             ++S NYD+ AD   QMKKQ LT+SW+P   + YAVG+L GNKLHLNP+HAV QLRP  E
Sbjct: 177  DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236

Query: 375  HVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEEDWVPLK 542
            H++S   K K+      +  VKSEE  +    G             E     EE W+PLK
Sbjct: 237  HLNSGGPKRKN--NVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLK 294

Query: 543  YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLP 722
            Y+G  SDL+ R+LQ M+++ VS + FSMS +DY++SLCPGTS+ G   KGPS + LL+L 
Sbjct: 295  YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354

Query: 723  LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 902
            L+ER +  L +GPPV RF ALKH   D   EE +  LQ +A++VQGLWVPKS  +   D 
Sbjct: 355  LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD- 413

Query: 903  GIKVLARDYVLLLFSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1079
            G    ARD+VL LFSKN ++  SQ+   K L   +K  LN+  V+R  FKDWK KE  D 
Sbjct: 414  GSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDR 473

Query: 1080 SFVKSNPSVVKKQXXXXXXXXKIIN-----DTIGGRNGPGKKSDTTTNPATSKSSSKVTA 1244
             F+ ++  + +KQ        K         ++   N    K           SS + T 
Sbjct: 474  LFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTT 533

Query: 1245 RTPKVA-NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAR 1421
            ++     N + AMS+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S      AR
Sbjct: 534  KSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADAR 593

Query: 1422 EAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 1601
             AV AA  +DA PDEL+ II+QVA  IHG+ V  SSP++P+YDP RKVVI L     P A
Sbjct: 594  MAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKA 653

Query: 1602 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 1748
             LKKA +LEASK EL R I+  EY KV+ E+C+S GS+W L+S  GN++
Sbjct: 654  VLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  514 bits (1323), Expect = e-143
 Identities = 286/589 (48%), Positives = 370/589 (62%), Gaps = 11/589 (1%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 194
            ED VVREIDV F+P VD  ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVE+DL V
Sbjct: 117  EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176

Query: 195  YVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLME 374
             ++S NYD+ AD   QMKKQ LT+SW+P   + YAVG+L GNKLHLNP+HAV QLRP  E
Sbjct: 177  DIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFE 236

Query: 375  HVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEEDWVPLK 542
            H++S   K K+      +  VKSEE  +    G             E     EE W+PLK
Sbjct: 237  HLNSGGPKRKN--NVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLK 294

Query: 543  YHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLP 722
            Y+G  SDL+ R+LQ M+++ VS + FSMS +DY++SLCPGTS+ G   KGPS + LL+L 
Sbjct: 295  YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354

Query: 723  LKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQ 902
            L+ER +  L +GPPV RF ALKH   D   EE +  LQ +A++VQGLWVPKS  +   D 
Sbjct: 355  LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD- 413

Query: 903  GIKVLARDYVLLLFSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDF 1079
            G    ARD+VL LFSKN ++  SQ+   K L   +K  LN+  V+R  FKDWK KE  D 
Sbjct: 414  GSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDR 473

Query: 1080 SFVKSNPSVVKKQXXXXXXXXKIIN-----DTIGGRNGPGKKSDTTTNPATSKSSSKVTA 1244
             F+ ++  + +KQ        K         ++   N    K           SS + T 
Sbjct: 474  LFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTT 533

Query: 1245 RTPKVA-NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAR 1421
            ++     N + AMS+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S      AR
Sbjct: 534  KSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADAR 593

Query: 1422 EAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 1601
             AV AA  +DA PDEL  II+QVA  IHG+ V  SSP++P+YDP RKVVI L     P A
Sbjct: 594  MAVAAAYGVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKA 653

Query: 1602 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 1748
             LKKA +LEASK EL R I+  EY KV+ E+C+S GS+W L+S  GN++
Sbjct: 654  VLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  509 bits (1311), Expect = e-141
 Identities = 289/571 (50%), Positives = 371/571 (64%), Gaps = 15/571 (2%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 194
            EDEVVREID+YF+P +DP T+LYVLQ P+R  WRPYEL++RC+EVR++P + ++E+DL +
Sbjct: 93   EDEVVREIDMYFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAI 152

Query: 195  YVDSKNYDSGADPRVQMKKQILTTSW--EPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPL 368
              DSKN+D  +    +M+KQ ++TSW   P+  SGYAVGVL G+KLHLNPIH V QLRP 
Sbjct: 153  DFDSKNFDRDSIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPS 212

Query: 369  MEHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYH 548
             +H+   E K K++  SN   TV++EE +E                 KD EE WV LKYH
Sbjct: 213  KQHLKESELK-KNIATSNDEKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYH 271

Query: 549  GASSDLTERYLQKMMAREVSQISFSMSSN----------DYLNSLCPGTSSGGFSSKGPS 698
            GA S+++ RYLQ+M   E S I FSMS            DYL +LCPG  +     K   
Sbjct: 272  GARSEISARYLQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYKDLR 331

Query: 699  IRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKS 878
            IRV   LPL ERFRTWL +GPP+HRF ALKHL  D  VEE+L VLQ +A+VVQGLWVPKS
Sbjct: 332  IRVS-QLPLDERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKS 390

Query: 879  SLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDW 1055
            SLVYG + G +VLARD+VL  FSK+  IK S      +   A    L +LAV+R +  DW
Sbjct: 391  SLVYGRNDGHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDW 450

Query: 1056 KLKELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKSDTTTNPATSKSSS 1232
            KLKE PD  F      +VK+Q        K I   + GGRN P  K+   +NP+    + 
Sbjct: 451  KLKEHPDKEFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKN--PSNPSAGIPAL 508

Query: 1233 KVTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTG 1412
                +    + +RT+MSE  REA+ KALQK+F++ K+CSFQQI   LR+ AVSE+ R  G
Sbjct: 509  PSGGKPTPRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVSENDRPKG 568

Query: 1413 FAREAVVAANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAE 1589
             A+ AV AA+ + DA P+ELQ +I+QVA NIHG  V KSSPDNPQYD  RKVV++L + E
Sbjct: 569  NAKGAVAAASFVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVVVELLIGE 628

Query: 1590 VPNAKLKKATILEASKMELKREISQIEYQKV 1682
             P+AKLKKATI++A+K EL R+I   E+QKV
Sbjct: 629  GPSAKLKKATIMKAAKSELNRDIPPAEFQKV 659


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
            [Theobroma cacao]
          Length = 588

 Score =  506 bits (1304), Expect = e-140
 Identities = 284/574 (49%), Positives = 372/574 (64%), Gaps = 12/574 (2%)
 Frame = +3

Query: 9    EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 188
            E ED VVREIDV+F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL
Sbjct: 19   EEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDL 78

Query: 189  TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPL 368
             V VDS NYDS    R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP 
Sbjct: 79   AVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPS 138

Query: 369  MEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEEDWVP 536
            M H+    SK K+   ++   TVK EEP +    G             EQ  D +E WVP
Sbjct: 139  MCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVP 198

Query: 537  LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLT 716
            LKYH + +D + +YLQ+MMA E  +I F+MS  DY++SLCPG S+    ++GPS R+LL+
Sbjct: 199  LKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLS 257

Query: 717  LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 896
            +PL+ER +  L +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  
Sbjct: 258  IPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPE 317

Query: 897  DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLK 1064
            D   K LARDYVLLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLK
Sbjct: 318  DP-YKSLARDYVLLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLK 374

Query: 1065 ELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSK 1235
            E  D  F K  P +VK Q          + + I  G + GP + K  T   P  + +S K
Sbjct: 375  ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDK 434

Query: 1236 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 1415
               R      +   MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S      
Sbjct: 435  GVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKAD 494

Query: 1416 AREAVVAANSIDAYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFRKVVIDLFVAEV 1592
            AR  V AA   DA   ELQ ++++VAV +H G+ V +SSP++P+YDP R+VVI+L   + 
Sbjct: 495  ARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK- 553

Query: 1593 PNAKLKKATILEASKMELKREISQIEYQKVLQEL 1694
               KLKKA +  A+ + LKREIS  EY K L+ +
Sbjct: 554  --GKLKKADVSAAALLSLKREISNNEYNKALRNM 585


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao]
          Length = 736

 Score =  504 bits (1298), Expect = e-140
 Identities = 288/622 (46%), Positives = 381/622 (61%), Gaps = 45/622 (7%)
 Frame = +3

Query: 9    EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 188
            E ED VVREIDV+F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE+DL
Sbjct: 116  EEEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDL 175

Query: 189  TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPL 368
             V VDS NYDS    R++M KQ L++SW P   +GYAVGVL G+KLHLNPIHAV QLRP 
Sbjct: 176  AVDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPS 235

Query: 369  MEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEEDWVP 536
            M H+    SK K+   ++   TVK EEP +    G             EQ  D +E WVP
Sbjct: 236  MCHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVP 295

Query: 537  LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLT 716
            LKYH + +D + +YLQ+MMA E  +I F+MS  DY++SLCPG S+    ++GPS R+LL+
Sbjct: 296  LKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN-KAQGPSRRLLLS 354

Query: 717  LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 896
            +PL+ER +  L +GPP HRF ALKH   D S+E++  VLQ HA +VQGLWVPKSSL++  
Sbjct: 355  IPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPE 414

Query: 897  DQGIKVLARDYVLLLFSKNVIIKDSQLPNNKLAPAMKD----VLNVLAVKRDNFKDWKLK 1064
            D   K LARDYVLLLFSKN II  +Q+  + L+P+ K+     L +LA++R +FKDWKLK
Sbjct: 415  DP-YKSLARDYVLLLFSKNPIISLAQV--HALSPSRKEEVKGFLKILAIERPSFKDWKLK 471

Query: 1065 ELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI--GGRNGPGK-KSDTTTNPATSKSSSK 1235
            E  D  F K  P +VK Q          + + I  G + GP + K  T   P  + +S K
Sbjct: 472  ENADEGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDK 531

Query: 1236 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 1415
               R      +   MS+E REAI KAL+K+F++ K+CS Q I + LRD+A+S+S      
Sbjct: 532  GVRRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKAD 591

Query: 1416 AREAVVAANSIDAYPDELQTIINQVAVNIH-GICVPKSSPDNPQYDPFR----------- 1559
            AR  V AA   DA   ELQ ++++VAV +H G+ V +SSP++P+YDP R           
Sbjct: 592  ARMVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKW 651

Query: 1560 --KVVIDLFVAEVPN--------------------AKLKKATILEASKMELKREISQIEY 1673
                ++ +F  + P+                     KLKKA +  A+ + LKREIS  EY
Sbjct: 652  EEMFMVSMFFLQNPSFSSELFFPCREVVINLLRVKGKLKKADVSAAALLSLKREISNNEY 711

Query: 1674 QKVLQELCLSQGSAWILRSAGG 1739
             KV+ + C  + S W+L+S  G
Sbjct: 712  NKVMSDFCEYKSSWWVLKSGDG 733


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  499 bits (1286), Expect = e-138
 Identities = 275/582 (47%), Positives = 374/582 (64%), Gaps = 9/582 (1%)
 Frame = +3

Query: 9    EPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDL 188
            + ED +VREIDV+F+P +D  ++LYV+QYPLR  WRPYELD+RCEEVRVKP++ EVE+DL
Sbjct: 108  DDEDMIVREIDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDL 167

Query: 189  TVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPL 368
            ++ VDS N+DS    R+ M KQ L+T+W P   +GYA+GVL GNKLHLNPIHAV QLR  
Sbjct: 168  SIDVDSNNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTS 227

Query: 369  MEHVDSKESKSKSVGPSNVNDTVK-SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKY 545
            M  + S  SK K+   S +   ++ S + +               EQ  + EE WVPLKY
Sbjct: 228  MGFLKSGGSKRKNNVASEIPVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKY 287

Query: 546  HGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLPL 725
            HG+ SD + RYLQ+M+  E S I F+M+  DY++SLCPG  S    SKGPS R LL++PL
Sbjct: 288  HGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPL 347

Query: 726  KERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQG 905
            +ERF+  L +G PV RF  L H   +++VE+V+ VL  +  +VQGLW P+S L++  D+ 
Sbjct: 348  EERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK- 406

Query: 906  IKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFS 1082
            +K LARDYVLL FSKN ++K   L  + KL   +K  LN+ AV+R +FKDWK ++  D S
Sbjct: 407  MKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLS 466

Query: 1083 FVKSNPSVVKKQXXXXXXXXKIINDTIG--GRNGPGKKSDTTTNPATSKSSSKV-TARTP 1253
            F+K +P++V KQ        K I D I   G++G   ++D   +   +K    + ++  P
Sbjct: 467  FIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGP 526

Query: 1254 KVA-NSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAV 1430
              A      +S E REA+ KALQKLF+  K+CS   I Q LRD+A+S+S      AR  V
Sbjct: 527  SGALTGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQSTLPKADARMTV 586

Query: 1431 VAANSIDAY---PDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNA 1601
            +AA  +D+      E   +I+QVA NIHG  V KSS D PQ+ P RKVV DL +A  P+A
Sbjct: 587  LAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSED-PQHGPLRKVVTDLLLAGGPDA 645

Query: 1602 KLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILR 1727
            KLKKA ++EA++  LKREIS  EY KV+ ++C S+GSAWIL+
Sbjct: 646  KLKKADVVEAARHVLKREISNAEYSKVMSDICESKGSAWILK 687


>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
            lycopersicum]
          Length = 659

 Score =  474 bits (1220), Expect = e-131
 Identities = 261/582 (44%), Positives = 367/582 (63%), Gaps = 6/582 (1%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 194
            +DEVVRE+DV+ +P  +     YVLQYPLR +WRPY LD+RC++VR++P+S E+E+DL +
Sbjct: 95   QDEVVREVDVWLTPSAN---EFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAI 151

Query: 195  YVDSKNYDSGADPRVQMKKQILTTSWEPSHV-SGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
              DSKN+D  +     +KKQI++T W PS   + +AVG+  G+K HLNP+HA+ QLRP +
Sbjct: 152  DFDSKNFDRDSVHAATIKKQIVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSL 211

Query: 372  EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHG 551
            +H   KES+ K++  SN   + ++E+ +E                 KD  E W+ LKYHG
Sbjct: 212  QH--RKESELKNLTTSNDEKSCENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHG 269

Query: 552  ASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLTLPLKE 731
              SD++ R+LQKM     S + FSM  +DYLN++CP   +     +    R L   P +E
Sbjct: 270  TRSDISARHLQKMAMEGGSPVPFSMIPSDYLNAICPARPTDIDRLRNLRTR-LSQKPFEE 328

Query: 732  RFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIK 911
            R RTWLL+GPP+HRFD LKHL  D  V+E+L VL+  A++VQGLWV KSSLVY T+ G++
Sbjct: 329  RVRTWLLEGPPIHRFDTLKHLAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVE 388

Query: 912  VLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFV 1088
            VLAR++VL  F+K+ +IK S      +   A   VL  LAV+R +  DWKLKELPD  F 
Sbjct: 389  VLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFE 448

Query: 1089 KSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVAN 1265
                 VV++Q        K IND + GGRN P     T  NP   K++    + + K   
Sbjct: 449  NLYGDVVREQEAIWESMGKQINDIMHGGRNRP-----TLKNPLNPKANIPALSSSDKPTP 503

Query: 1266 S---RTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVA 1436
            +   RT++SEE+R A+ KALQ +F+  K+CS  QI +L+      ++  S          
Sbjct: 504  TTFLRTSLSEEIRGALPKALQNVFRIHKVCSLLQICELMEKEDPMKAIISP--------- 554

Query: 1437 ANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKA 1616
            A   DA   E++ ++NQ+AVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE  NAKLKKA
Sbjct: 555  AGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSNAKLKKA 614

Query: 1617 TILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGN 1742
            +I+EA+K++L R+++ +E+QKV++ELC S+ SAW+L  +  N
Sbjct: 615  SIVEAAKLQLGRDVTTVEFQKVMKELCRSENSAWVLGISDSN 656


>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
            gi|358344405|ref|XP_003636280.1| DNA-directed RNA
            polymerase III subunit RPC5 [Medicago truncatula]
            gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
            gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
            III subunit RPC5 [Medicago truncatula]
          Length = 683

 Score =  472 bits (1215), Expect = e-130
 Identities = 259/595 (43%), Positives = 374/595 (62%), Gaps = 16/595 (2%)
 Frame = +3

Query: 6    VEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEID 185
            ++ ED VVREIDVYFSP +D  T+LYV+QYPLR  WRPY+LD++CEEVR+KP + EVE+D
Sbjct: 102  MDEEDTVVREIDVYFSPSIDNDTKLYVMQYPLRPSWRPYDLDEQCEEVRLKPGTSEVEVD 161

Query: 186  LTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRP 365
            L++ ++S N +     +++  KQ L+T+W+P   +G AVG+L G+KLHL+PIHAV QLRP
Sbjct: 162  LSIDLESYNVEKATADKLKYTKQTLSTTWKPPPANGCAVGLLMGDKLHLHPIHAVVQLRP 221

Query: 366  LMEHVDSKESKSKSVGPSNVND---TVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVP 536
               ++DS  S+ K+V  SN  +   T   E+  +G             EQ  DS + WVP
Sbjct: 222  SRHYLDSGGSEKKNVATSNNQNKQTTPSMEQKSDG---------APSIEQKSDSNQCWVP 272

Query: 537  LKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRVLLT 716
            L+YHG  SD++ RY Q+M+  E S I+F MS+ DY+ +LCPG SS    +KGPS R LL+
Sbjct: 273  LEYHGCKSDISSRYFQQMVTHESSPINFEMSTYDYIATLCPGVSSNTL-AKGPSKRYLLS 331

Query: 717  LPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT 896
            LP+++R +T L++GPP+HRF A+KH   + S +E+L VL+  A++++G WVP+SSL++ T
Sbjct: 332  LPVEKRLQTLLIEGPPLHRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLLFPT 391

Query: 897  DQGIKVLARDYVLLLFSKNVIIKDSQ---LPNNKLAPAMKDVLNVLAVKRDNFKD----W 1055
              GI+ LAR+Y+L+ F K++ +K  +   L   +L   MK  +   A+++ + K     W
Sbjct: 392  G-GIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKENYW 450

Query: 1056 KLKELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTIGGRNGPGKKSDTTTNPATSKSSSK 1235
            K KELPD SF+K  P VVKKQ          +N  IG   G  K     TN   + +   
Sbjct: 451  KFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAITNSGVNNALFT 510

Query: 1236 VTARTPKVAN------SRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSES 1397
             T   P+  +          MS E R A+  AL+KLF++ K+CSFQ I Q LR +A++++
Sbjct: 511  STNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLICQELRGLALAQT 570

Query: 1398 ARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDL 1577
                G ++ +V AANS+D   DEL+ I+ +VA +IHG  V KS+    Q DPFR VVID+
Sbjct: 571  MLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHGCYVLKSA----QNDPFRDVVIDM 626

Query: 1578 FVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAGGN 1742
                 PN KLKKA ILEA++ +L R++   EY K + ELC+S+GS W+L+S  G+
Sbjct: 627  LRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVSKGSFWVLKSGDGS 681


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
            max]
          Length = 697

 Score =  469 bits (1208), Expect = e-129
 Identities = 265/602 (44%), Positives = 378/602 (62%), Gaps = 22/602 (3%)
 Frame = +3

Query: 3    EVEPEDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEI 182
            ++  ED VVREIDV+FSP VD +T+LYV QYPLR  WRPY+LD++CEEVR+K  + EVEI
Sbjct: 103  DIPEEDTVVREIDVFFSPSVDAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEI 162

Query: 183  DLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLR 362
            DL++ +DS + D     +  + KQ L+T+W+PSH +G AVG+L G+KLHL+P+HAV QLR
Sbjct: 163  DLSIDLDSDHIDKEFATKYNITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLR 222

Query: 363  PLMEHVDSKESKSKSVGPSNVNDTVKSEEPQE-----GXXXXXXXXXXXXXEQTKDSEED 527
            P ++H++S  SK K+   +  N TVK E   E                   EQ  D +E 
Sbjct: 223  PTLQHLNSGGSKRKNAASTGANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDEC 282

Query: 528  WVPLKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRV 707
            WVPLKYH   SD++ RYLQ+M+ +E S I+F+M + DY+ +LCPG SS     KG S R 
Sbjct: 283  WVPLKYHSCKSDISSRYLQQMVTQESSPINFTMRAYDYVTALCPGGSSNNL-PKGLSKRY 341

Query: 708  LLTLPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLV 887
            LL+LP++ER +  +L+  P+HRF A+KH   + S  E+L  LQ HA +V GLW  KSSL+
Sbjct: 342  LLSLPVEERLKK-MLEDRPLHRFSAIKHFAPEYSENELLGFLQQHAILVWGLWTAKSSLL 400

Query: 888  YGTDQGIKVLARDYVLLLFSKNVIIK--DSQLPNNKLAPAMKDVLNVLAVKRDNFKD--- 1052
            Y  D G++ LARDY LLLFSK++ ++  D  +   +L   +++ L +  V+R++      
Sbjct: 401  Y-PDGGVETLARDYSLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLDKSTG 459

Query: 1053 -----WKLKELPDFSFVKSNPSVVKKQXXXXXXXXKII---NDTIG----GRNGPGKKSD 1196
                 WK +ELPD SF K  P +V+KQ        K +   +  +G    G+N    +  
Sbjct: 460  KPNPYWKFRELPDESFKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQGV 519

Query: 1197 TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLR 1376
             T    +  S  +VT+   +V  ++  MS E R A+  AL+KLF++ K+CSF+ I + LR
Sbjct: 520  NTEVHKSESSDQRVTS-LGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGLR 578

Query: 1377 DMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPF 1556
            +MAVS++  S G ++ AV AA+S+D   +EL  +I++VA  I+G  V KSSPD    DPF
Sbjct: 579  EMAVSKAMLSKGDSKMAVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPD----DPF 634

Query: 1557 RKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQELCLSQGSAWILRSAG 1736
            R VVID+     PNAKLKKA ILEA++ +L RE++  EY KV+ ELC+S+GS W+L+S  
Sbjct: 635  RDVVIDMLCGSGPNAKLKKAEILEAARRKLGREVASNEYTKVMSELCVSKGSVWVLKSGD 694

Query: 1737 GN 1742
            G+
Sbjct: 695  GS 696


>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  462 bits (1190), Expect = e-127
 Identities = 269/571 (47%), Positives = 355/571 (62%), Gaps = 12/571 (2%)
 Frame = +3

Query: 3    EVEPEDE-VVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVE 179
            EVE E++ VVREIDV+F+P +D  T+LYVLQYPLR  WRPYELD+RCEEVRVKPAS EVE
Sbjct: 102  EVEAEEDMVVREIDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVE 161

Query: 180  IDLTVYVDSKNYDSGADPRVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQL 359
            +DL++ VDSKNYD     R+ M KQ L  SW+    + YAVGVL GNKLHLN IHAV QL
Sbjct: 162  MDLSLDVDSKNYDPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQL 221

Query: 360  RPLMEHVDSKESKSKSVGPSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEED 527
            RP ++H+ S  SK K+    +  DTVK EE       G             +Q    EE 
Sbjct: 222  RPSLKHLISAGSKKKNNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEG 281

Query: 528  WVPLKYHGASSDLTERYLQKMMAREVSQISFSMSSNDYLNSLCPGTSSGGFSSKGPSIRV 707
            WVPLKYHG+ S+ + RYL+KM  +E S + F+MS  DYLNSLCPG+   G   KGPS R 
Sbjct: 282  WVPLKYHGSESESSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRA 341

Query: 708  LLTLPLKERFRTWLLQG-PPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSL 884
            LL+LPL+ER ++ L +G  PVHRF  LKH   D + +E+L  LQ+HA +VQGLW PKSSL
Sbjct: 342  LLSLPLEERIKSLLCEGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSL 401

Query: 885  VYGT--DQGIKVLARDYVLLLFSKNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDW 1055
            + GT  + G + +ARDYVLLLF KN +   S L   + L  A+   LN+L V+R + KDW
Sbjct: 402  LLGTSKETGAQRIARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDW 461

Query: 1056 KLKELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTIG-GRNGPG-KKSDTTTNPATSKSS 1229
            K K   D SF+K+ P VVKKQ        + I +  G G++G G K +   + P    +S
Sbjct: 462  KFKGQTDISFIKNYPDVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNS 521

Query: 1230 SKVTARTPKVANSRTAMSEEVREAI-TKALQKLFKSVKICSFQQISQLLRDMAVSESARS 1406
            +K   +          + +++RE + +K L K+ +  K+CS Q + Q LR++A+++    
Sbjct: 522  NKGVPKGTSEVVGGKKIPDDIREVLCSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLP 581

Query: 1407 TGFAREAVVAANSIDAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVA 1586
                R A  AA    A P EL  ++++ A+NIHG+ V KSS ++PQYDPFR VVIDL   
Sbjct: 582  KADDRFARAAACG-TASPGELVKLLDETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQ 640

Query: 1587 EVPNAKLKKATILEASKMELKREISQIEYQK 1679
                AKLKKA I +A+K  LKR+++  EY K
Sbjct: 641  NGLAAKLKKAEIFDAAKNALKRDVTSNEYSK 671


>gb|ABU45208.1| unknown [Solanum bulbocastanum]
          Length = 654

 Score =  455 bits (1171), Expect = e-125
 Identities = 258/570 (45%), Positives = 357/570 (62%), Gaps = 14/570 (2%)
 Frame = +3

Query: 15   EDEVVREIDVYFSPCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTV 194
            +DEVVR++DV+ +P  +     YVLQYPLR +WRPY LD++C++VR++P++ E+E+DL +
Sbjct: 95   QDEVVRQVDVWLTPSFN---EFYVLQYPLRSEWRPYGLDEKCQDVRLRPSTAEMEVDLAI 151

Query: 195  YVDSKNYDSGADPRVQMKKQILTTSWEP-SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLM 371
              DSKN+D  +     +KKQI++T W P S  + +AVG+L G+KLHLNP+HAV QLRP +
Sbjct: 152  DFDSKNFDRDSVHAATIKKQIVSTKWVPLSTCADFAVGILIGDKLHLNPVHAVVQLRPSL 211

Query: 372  EHVDSKESKSKSVGPSNVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHG 551
            +H   KES+ K++  SN   T ++E+ +E                 KD  E W+ LKYHG
Sbjct: 212  QH--RKESELKNLTTSNDEKTCENEDVKEKKPVGPSKKQNKPPGNYKDIGEHWLHLKYHG 269

Query: 552  ASSDLTERYLQKMMAREVSQISFSM---------SSNDYLNSLCPGTSSGGFSSKGPSIR 704
              SD++ R+LQKM     S + FSM            DYLN++CP   +     +    R
Sbjct: 270  TRSDISARHLQKMAIEGGSPVPFSMIPFFRANLMHRGDYLNAICPARPTDIDRLRNLRTR 329

Query: 705  VLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSL 884
             L   P +ER RTWLLQGPP+HRFDALKHL  D  V+E+L VL+  A++VQGLWVPKSSL
Sbjct: 330  -LSQKPFEERVRTWLLQGPPIHRFDALKHLAPDNPVDEILEVLKSCAQLVQGLWVPKSSL 388

Query: 885  VYGTDQGIKVLARDYVLLLFSKNVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKL 1061
            VY T+ G++VLAR++VL  F+KN +IK S      +   A   VL  LAV+R +  DWKL
Sbjct: 389  VYDTNNGVEVLARNFVLYEFTKNTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKL 448

Query: 1062 KELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI-GGRNGPGKKSD-TTTNPATSKSSSK 1235
            KELPD  F      VV++Q        K IND + GGRN P  K+     N     SS K
Sbjct: 449  KELPDKKFENLYGDVVREQQAIWDSMGKQINDILHGGRNRPTMKNPLPKANLPALSSSDK 508

Query: 1236 VTARTPKVANSRTAMSEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGF 1415
             T  T      RT+MSEE+R A+ KALQ +F+  K+CS  QI +++              
Sbjct: 509  PTPTT----FLRTSMSEEIRGALPKALQNIFRIHKVCSLLQICEMMEKED---------- 554

Query: 1416 AREAVVAANSI-DAYPDELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEV 1592
             ++A++A   + DA   E++ ++NQ+AVNIHG+ V KSSPDNPQYD  RKVVIDLF+AE 
Sbjct: 555  PKKAIIAPTGVSDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEG 614

Query: 1593 PNAKLKKATILEASKMELKREISQIEYQKV 1682
             +AKLKKA+I+EA+K++L R+++ +E+QKV
Sbjct: 615  SSAKLKKASIVEAAKLQLGRDVTTVEFQKV 644