BLASTX nr result
ID: Rehmannia24_contig00003190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00003190
(6291 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF37652.1| 180K protein [Youcai mosaic virus] 3126 0.0
dbj|BAN15047.1| replicase read-through product [Youcai mosaic vi... 3125 0.0
gb|AEV92949.1| replicase large component [Youcai mosaic virus] 3120 0.0
gb|AFT83336.1| replicase read-through product [Youcai mosaic virus] 3113 0.0
gb|AAP79445.1| RNA replicase, read-through component [Youcai mos... 3108 0.0
gb|AGW21597.1| replicase [Youcai mosaic virus] 3107 0.0
gb|ACB73170.1| replicase read-through product [Youcai mosaic virus] 3103 0.0
gb|AAK53541.1| RNA replicase read-through component [Youcai mosa... 3103 0.0
ref|NP_740757.2| replicase [Youcai mosaic virus] gi|10720256|sp|... 3097 0.0
gb|ABB55800.1| replicase read-through product [Youcai mosaic virus] 3096 0.0
prf||2211419A replicase 3094 0.0
ref|NP_543049.1| unnamed protein product [Wasabi mottle virus] g... 3016 0.0
dbj|BAB82444.1| RNA replicase readthrough protein [Wasabi mottle... 3015 0.0
gb|ACV13190.1| RNA replicase [Ribgrass mosaic virus] gi|25669286... 2941 0.0
ref|YP_005476600.1| replicase readthrough component [Ribgrass mo... 2939 0.0
gb|AEI69664.1| replicase readthrough component [Ribgrass mosaic ... 2935 0.0
gb|AEU04723.1| RNA replicase [Turnip vein-clearing virus] 2934 0.0
gb|AFN80475.1| RNA replicase readthrough component [Ribgrass mos... 2927 0.0
gb|AEI69657.1| replicase readthrough component [Ribgrass mosaic ... 2925 0.0
ref|NP_046151.1| unnamed protein product [Turnip vein-clearing v... 2924 0.0
>dbj|BAF37652.1| 180K protein [Youcai mosaic virus]
Length = 1596
Score = 3126 bits (8104), Expect = 0.0
Identities = 1544/1597 (96%), Positives = 1573/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQ AVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQQAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F YI+RL++QRRPVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYISRLDRQRRPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQCKLST NG DTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCKLSTANGADTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY +SVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYRSSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFD T K
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDTTTK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF
Sbjct: 481 ELIWTSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDGFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEE+AEALSGEV QSEGLSLSNNAPFPCV NLKEGLVPA GVCPTGGNFD
Sbjct: 601 ELTLPFKKPTEEEIAEALSGEVKQSEGLSLSNNAPFPCVNNLKEGLVPAYGVCPTGGNFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
R+D+DISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RMDIDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVD ESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDSESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLT+CCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTACCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG+IRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGIIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHCEV Y+YGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLTLLSHCEVAYVYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
TFFLNKKYDGAVLCTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TFFLNKKYDGAVLCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISEMEKLSNFILDMYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISEMEKLSNFILDMYKVESGTQ-QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1139
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERP+FMKPKLRTAAEMPRTAGLL
Sbjct: 1140 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPIFMKPKLRTAAEMPRTAGLL 1199
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1200 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1259
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1260 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1319
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDL SSQAMEILELDISKYD+SQN
Sbjct: 1320 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLYSSQAMEILELDISKYDESQN 1379
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1380 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1439
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1440 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1499
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1500 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1559
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1560 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1596
>dbj|BAN15047.1| replicase read-through product [Youcai mosaic virus]
Length = 1597
Score = 3125 bits (8101), Expect = 0.0
Identities = 1540/1597 (96%), Positives = 1573/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+RPVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKRPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALS +VVQ+EGLSLSNNAPFPCV NLKEGLVPACGV PT NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSEKVVQNEGLSLSNNAPFPCVSNLKEGLVPACGVSPTSVNFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG++RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGIVRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLTLLSHCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
TFFLNKKYDGAVLCTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TFFLNKKYDGAVLCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+EKLSNFILDMYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELEKLSNFILDMYKVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYV+KEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVIKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPAQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>gb|AEV92949.1| replicase large component [Youcai mosaic virus]
Length = 1597
Score = 3120 bits (8088), Expect = 0.0
Identities = 1538/1597 (96%), Positives = 1572/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+RPVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKRPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHE+MLLDCDS
Sbjct: 181 RPFQQCELSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHESMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIPLFDASITTGRMSRREVL+NKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLINKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDAL GVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALIGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALS +VVQ+EGLSLSNNAPFPCV NLKEGLVPACGV PT NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSEKVVQNEGLSLSNNAPFPCVSNLKEGLVPACGVSPTSVNFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAGV+RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGVVRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLTLLSHCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
TFFLNKKYDGAVLCTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TFFLNKKYDGAVLCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+EKLSNFILDMYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELEKLSNFILDMYKVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYV+KEFSG DGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVIKEFSGMDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPAQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>gb|AFT83336.1| replicase read-through product [Youcai mosaic virus]
Length = 1597
Score = 3113 bits (8070), Expect = 0.0
Identities = 1531/1597 (95%), Positives = 1570/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LASDAYPEFEISFTHTQ+AVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASDAYPEFEISFTHTQNAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+RPVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKRPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
PFQQCKLSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 LPFQQCKLSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
V LEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFF ASQRYVYHKEFLVT
Sbjct: 241 VVLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFSASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
R+NTWYCKFTRVDTFTLFRGVY TSVDSE+FYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RINTWYCKFTRVDTFTLFRGVYKTSVDSEDFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVI+PLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIVPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSG+VVQ+EGLSLSN+APFPCV NLKEGLVPA GVCPTGGNFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGKVVQNEGLSLSNDAPFPCVSNLKEGLVPAYGVCPTGGNFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG++RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGIVRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRR+TLRCPADV
Sbjct: 901 GCVNFLTLLSHCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRITLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
TFFLNKKYDGAV+CTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TFFLNKKYDGAVMCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+EKLSN+ILDMY V SGTQ QLQIDTVF+G NLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELEKLSNYILDMYTVESGTQXQLQIDTVFRGPNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYV+KEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVIKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDE HLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDENHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>gb|AAP79445.1| RNA replicase, read-through component [Youcai mosaic virus]
Length = 1597
Score = 3108 bits (8058), Expect = 0.0
Identities = 1530/1597 (95%), Positives = 1568/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDN VEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNVVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+RPVPEYQRAAF NYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKRPVPEYQRAAFYNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSGEVVQ EGLSLSNNAPFPCV NLKEGL+PACG+ P G NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGEVVQDEGLSLSNNAPFPCVSNLKEGLIPACGLGPKGANFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLT+CCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTACCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAGV RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGVTRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLTLLSHCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T+FLN +YDG+V+CTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TYFLNTRYDGSVMCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNF+L+MYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELGKLSNFLLEMYKVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGID+WLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDEWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>gb|AGW21597.1| replicase [Youcai mosaic virus]
Length = 1597
Score = 3107 bits (8055), Expect = 0.0
Identities = 1530/1597 (95%), Positives = 1567/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQ AVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQQAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++QRRPVPEYQRAAF+NYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQRRPVPEYQRAAFHNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 INFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENL SFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLGSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSGEVVQ EGL LSN APFPCV NLKEGLVPACG+CP G NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGEVVQDEGLRLSNKAPFPCVSNLKEGLVPACGLCPNGANFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAK+VLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKLVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG+ RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGITRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFL LLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLMLLSHCDVAYVYGDTQQIPFICRVANFPYPAHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T+FLN+KYDG+VLCTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TYFLNQKYDGSVLCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNF+L+MYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELGKLSNFLLEMYKVESGTQYQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>gb|ACB73170.1| replicase read-through product [Youcai mosaic virus]
Length = 1596
Score = 3103 bits (8045), Expect = 0.0
Identities = 1528/1597 (95%), Positives = 1569/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+ PVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKCPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTH+FSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHNFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALS ++VQ+EGLSLSNNAPFPCV NLKEGLVPA G+CPTG NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSEKLVQNEGLSLSNNAPFPCVSNLKEGLVPAYGMCPTGSNFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAK VLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAK-VLVDGVPGCGKTKEILEKVNFS 839
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG++RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 840 EDLVLVPGKEASKMIIRRANQAGIVRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 899
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRR+TLRCPADV
Sbjct: 900 GCVNFLTLLSHCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRITLRCPADV 959
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T+FLN+KYDGAV+CTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 960 TYFLNQKYDGAVMCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1019
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHT RCKYYTVVLDPMVN
Sbjct: 1020 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTARCKYYTVVLDPMVN 1079
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNFILDMY V SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1080 VISELGKLSNFILDMYTVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1139
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1140 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1199
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYV+KEFSGTDGMAMT+ESFSRWLS
Sbjct: 1200 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVIKEFSGTDGMAMTKESFSRWLS 1259
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1260 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1319
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1320 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1379
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1380 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1439
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1440 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1499
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1500 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1559
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1560 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1596
>gb|AAK53541.1| RNA replicase read-through component [Youcai mosaic virus]
Length = 1597
Score = 3103 bits (8044), Expect = 0.0
Identities = 1529/1597 (95%), Positives = 1567/1597 (98%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+RPVPEYQRAAF NYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKRPVPEYQRAAFYNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC++STVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCEISTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYRTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKEL QK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELRQKKNVDPDVAAKVMVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSGEVVQ EGLSLSNNAPFPCV NLKEGLVPACG+ P G NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGEVVQDEGLSLSNNAPFPCVSNLKEGLVPACGLGPKGANFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEG PVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGNPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLT+CCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTACCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAGV RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGVTRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLTLLSHCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T+FLN +YDG+V+CTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TYFLNTRYDGSVMCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNF+L+MYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELGKLSNFLLEMYKVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGID+WLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDEWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>ref|NP_740757.2| replicase [Youcai mosaic virus] gi|10720256|sp|Q66220.2|RDRP_YOMV
RecName: Full=Replicase large subunit; AltName: Full=182
kDa protein; Contains: RecName: Full=Replicase small
subunit; AltName: Full=125 kDa protein; AltName:
Full=Methyltransferase/RNA helicase; Short=MT/HEL
gi|30027720|gb|AAB60599.2| replicase [Youcai mosaic
virus]
Length = 1597
Score = 3097 bits (8030), Expect = 0.0
Identities = 1527/1597 (95%), Positives = 1564/1597 (97%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQ AVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQQAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++QRRPVPEYQRAAF+NYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQRRPVPEYQRAAFHNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVN DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNRWDTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 INFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENL SFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLGSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSGEVVQ EGL LSN APFPCV NLKEGLVPACG+CP G NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGEVVQDEGLRLSNKAPFPCVSNLKEGLVPACGLCPNGANFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAK+VLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKLVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG+ RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGITRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFL LLSHC+V Y+Y DTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLMLLSHCDVAYVYVDTQQIPFICRVANFPYPAHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T+FLN+KYDG+VLCTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TYFLNQKYDGSVLCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNF+L+MYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELGKLSNFLLEMYKVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLE IDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLETIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>gb|ABB55800.1| replicase read-through product [Youcai mosaic virus]
Length = 1597
Score = 3096 bits (8027), Expect = 0.0
Identities = 1526/1597 (95%), Positives = 1562/1597 (97%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKV FSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVLFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++Q+RPVPEYQRAAF NYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQKRPVPEYQRAAFYNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVNG DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNGADTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSF NIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFCNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYRTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
MNFWFPKVRDMVIIP FDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 MNFWFPKVRDMVIIPFFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSGEVVQ EGLSLSNNA FPCV NLKEGLVPACG+CP G NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGEVVQEEGLSLSNNASFPCVSNLKEGLVPACGLCPKGANFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCD+T
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDQT 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAGV RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGVTRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTLLS C+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLTLLSQCDVAYVYGDTQQIPFICRVANFPYPSHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T FLN +YDG V CTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 THFLNTRYDGLVTCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISR SPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRTSPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNF+LDMYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELGKLSNFLLDMYKVESGTQXQLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQ+LDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQRLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLERIDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGID+WLA+VW+QGHR+TTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDEWLAQVWRQGHRRTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1597
>prf||2211419A replicase
Length = 1596
Score = 3094 bits (8022), Expect = 0.0
Identities = 1527/1597 (95%), Positives = 1564/1597 (97%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQ AVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQQAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+F Y++RL++QRRPVPEYQRAAF+NYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIFSYLSRLDRQRRPVPEYQRAAFHNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+LSTVN DTYAIALHSIYDIP DEFGAALLRKNVKICYAAFHFHENMLLDCDS
Sbjct: 181 RPFQQCELSTVNRWDTYAIALHSIYDIPADEFGAALLRKNVKICYAAFHFHENMLLDCDS 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLEDIGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT
Sbjct: 241 VTLEDIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY TSVDSEEFYKAM++AWEYKKTLAMLNSERTIFKDSAA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKTSVDSEEFYKAMDDAWEYKKTLAMLNSERTIFKDSAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 INFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDALKGV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK EEF
Sbjct: 481 ELIWSSLCDALKGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRTEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENL SFDLD+FKELCQK+NVDPD AIMN+
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLGSFDLDAFKELCQKKNVDPDVAAKVVVAIMNS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEEVAEALSGEVVQ EGL LSN APFPCV NLKEGLVPACG+CP G NFD
Sbjct: 601 ELTLPFKKPTEEEVAEALSGEVVQDEGLRLSNKAPFPCVSNLKEGLVPACGLCPNGANFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD
Sbjct: 661 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWDEGKPVCDET
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDEGKPVCDET 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAK+VLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKLVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAG+ RADKDNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGITRADKDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFL LLSHC+V Y+Y DTQQIPFICRVANFPYP HFAKLVVDEKEDRRVTLRCPADV
Sbjct: 901 GCVNFLMLLSHCDVAYVYVDTQQIPFICRVANFPYPAHFAKLVVDEKEDRRVTLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
T+FLN+KYDG+VLCTSSVERSVSAEV+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TYFLNQKYDGSVLCTSSVERSVSAEVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISE+ KLSNF+L+MYKV SGTQ QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISELGKLSNFLLEMYKVESGTQ-QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 1139
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKERPVFMKPKLRTAAEMPRTAGLL
Sbjct: 1140 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKERPVFMKPKLRTAAEMPRTAGLL 1199
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS
Sbjct: 1200 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 1259
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1260 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1319
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLE IDTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1320 FGPMFSELTRMLLETIDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1379
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGIDDWLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1380 EFHCAVEYKIWEKLGIDDWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1439
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1440 IIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1499
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL
Sbjct: 1500 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1559
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV
Sbjct: 1560 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1596
>ref|NP_543049.1| unnamed protein product [Wasabi mottle virus]
gi|18146764|dbj|BAB82440.1| RNA replicase readthrough
protein [Wasabi mottle virus]
Length = 1597
Score = 3016 bits (7818), Expect = 0.0
Identities = 1467/1597 (91%), Positives = 1551/1597 (97%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEAV YI+RL++QRRPVPEYQRAAFNNY+ENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAVHGYISRLKRQRRPVPEYQRAAFNNYSENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
+PFQQC LSTVNG DTYAIALHS+YDIPV+EFG+ALLRKNVK+CYAAFHFHENMLLDCD+
Sbjct: 181 QPFQQCALSTVNGDDTYAIALHSVYDIPVEEFGSALLRKNVKVCYAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLE+IGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLEEIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY SVDS+EFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKNSVDSDEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPK RDMVI+PLFDASITTGRMSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 INFWFPKCRDMVIVPLFDASITTGRMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFF VTKL HVQDEIVLKKFQKFD+TAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFPVTKLGHVQDEIVLKKFQKFDSTAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDAL GV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK AEEF
Sbjct: 481 ELIWTSLCDALMGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKKAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
+SCDLSKPLEESEKYYNALSELSVLENLDSFDL++FKELCQK++VDPD AIM +
Sbjct: 541 KSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKELCQKKSVDPDVAAKVVVAIMKS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEE+AE+LS + +++EGLSLSN APFPCV NL+ GLVPACG+CP G FD
Sbjct: 601 ELTLPFKKPTEEEIAESLSNDTIRNEGLSLSNTAPFPCVSNLEGGLVPACGLCPKSGGFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
++DMDISEFHL+SVDAVKKGAMMSAVYTG IKVQQMKN+VDYLSASLSATVSNLCKVLRD
Sbjct: 661 KIDMDISEFHLRSVDAVKKGAMMSAVYTGNIKVQQMKNFVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+GRWLLKPNA+CHAWGVAEDA+HKLVIVLLNWD+GKPVCD+T
Sbjct: 721 VHGVDPESQEKSGVWDVRRGRWLLKPNAKCHAWGVAEDANHKLVIVLLNWDDGKPVCDQT 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
W+RLAVSSDSLVYSDMGKLKTLTSCC DGEPPEP AKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WYRLAVSSDSLVYSDMGKLKTLTSCCVDGEPPEPRAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAGV RAD+DNVRTVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGVTRADRDNVRTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTL+S C++ Y+YGDTQQIPFICRVANFPYPKHFA+LVVDEKEDRR+TLRCPADV
Sbjct: 901 GCVNFLTLISQCDIAYVYGDTQQIPFICRVANFPYPKHFARLVVDEKEDRRITLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
TFFLNKKYDG+VLCTSSVERSVSA+V+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TFFLNKKYDGSVLCTSSVERSVSAQVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTT CKY++VVLDP+V+
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTSCKYFSVVLDPLVS 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISEMEKLSNFILDMYKV SGTQ QLQID VFKG NL VPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISEMEKLSNFILDMYKVESGTQYQLQIDAVFKGVNLNVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+PVF+KPK+RTAAEMPRTAGL+
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKEKPVFLKPKIRTAAEMPRTAGLI 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWD+Y+VKEFSG +GMA TRE FSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDSYIVKEFSGIEGMAKTREGFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLER+DTSKFLFYTRKTP+QIEEFFSDLDSSQAMEILELDISKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERVDTSKFLFYTRKTPTQIEEFFSDLDSSQAMEILELDISKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGID+WLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDEWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPM+KVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMEKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
FCGRYVIHHDRGAIVYYDPLKLISKLGCKHI+DEVHLEELRRSLCDV SNLNNCAYFSQL
Sbjct: 1501 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIKDEVHLEELRRSLCDVASNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGG+F YCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGSFAYCSIIKYLSDKRLFKDLFFV 1597
>dbj|BAB82444.1| RNA replicase readthrough protein [Wasabi mottle virus]
Length = 1597
Score = 3015 bits (7817), Expect = 0.0
Identities = 1466/1597 (91%), Positives = 1550/1597 (97%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
LAS+AYPEFEISFTHTQHAVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 LASNAYPEFEISFTHTQHAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEAVF YI+RL++QRRPVPEYQRAAFNNY+ENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAVFGYISRLKRQRRPVPEYQRAAFNNYSENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
+PFQQC LSTVNG DTYA+ALHSIYDIPV+EFG ALLRKNVK+CYAAFHFHENMLLDCD+
Sbjct: 181 QPFQQCALSTVNGDDTYAVALHSIYDIPVEEFGGALLRKNVKVCYAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTLE+IGATFQR+GDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLEEIGATFQRAGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY SVDS+EFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYKNSVDSDEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASITTGRMSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 INFWFPKVRDMVIVPLFDASITTGRMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKL HVQDEIVLKKFQKFD+TAK
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLGHVQDEIVLKKFQKFDSTAK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDAL GV PSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVL+YK AEEF
Sbjct: 481 ELIWTSLCDALMGVIPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLEYKRAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
+SCDLSKPLEESEKYYNALSELSVLENLDSFDL++FKELCQK++VDPD AIM +
Sbjct: 541 KSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKELCQKKSVDPDVAAKVVVAIMKS 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTGGNFD 4247
ELTLPFKKPTEEE+AE+LS + ++EGLSLSN APFPCV NL+ GLVPACG+CP G FD
Sbjct: 601 ELTLPFKKPTEEEIAESLSNDTTRNEGLSLSNTAPFPCVSNLEGGLVPACGLCPKSGGFD 660
Query: 4246 RVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCKVLRD 4067
++DMDISEFHLKSVDAVKKGAMMSAVYTG IKVQQMKN+VDYLSASLSATVSNLCKVLRD
Sbjct: 661 KIDMDISEFHLKSVDAVKKGAMMSAVYTGNIKVQQMKNFVDYLSASLSATVSNLCKVLRD 720
Query: 4066 VHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPVCDET 3887
VHGVDPESQEKSGVWDVR+ RWLLKPNA+CHAWGVAEDA+HKLVIVLLNWD+GKPVCD+T
Sbjct: 721 VHGVDPESQEKSGVWDVRRERWLLKPNAKCHAWGVAEDANHKLVIVLLNWDDGKPVCDQT 780
Query: 3886 WFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILERVNFS 3707
W+RLAVSSDSLVYSDMGKLKTLTSCC DGEPPEP AKVVLVDGVPGCGKTKEILE+VNFS
Sbjct: 781 WYRLAVSSDSLVYSDMGKLKTLTSCCVDGEPPEPKAKVVLVDGVPGCGKTKEILEKVNFS 840
Query: 3706 EDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGLMLHT 3527
EDLVLVPGKEASKMIIRRANQAGV RAD+DNV+TVDSFLMHPPKR FKRLFIDEGLMLHT
Sbjct: 841 EDLVLVPGKEASKMIIRRANQAGVTRADRDNVKTVDSFLMHPPKRVFKRLFIDEGLMLHT 900
Query: 3526 GCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRCPADV 3347
GCVNFLTL+S C++ Y+YGDTQQIPFICRVANFPYPKHFA+LVVDEKEDRR+TLRCPADV
Sbjct: 901 GCVNFLTLISQCDIAYVYGDTQQIPFICRVANFPYPKHFARLVVDEKEDRRITLRCPADV 960
Query: 3346 TFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELLDKGY 3167
TFFLNKKYDG+VLCTSSVERSVSA+V+RGKGALNPITLPLEGKILTFTQADKFELLDKGY
Sbjct: 961 TFFLNKKYDGSVLCTSSVERSVSAQVVRGKGALNPITLPLEGKILTFTQADKFELLDKGY 1020
Query: 3166 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLDPMVN 2987
KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTT CKY+TVVLDP+V+
Sbjct: 1021 KDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTSCKYFTVVLDPLVS 1080
Query: 2986 VISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDTLLPG 2807
VISEMEKLSNFILDMYKV SGTQ QLQID VFKG NL VPTPKSGDWRDMQFYYDTLLPG
Sbjct: 1081 VISEMEKLSNFILDMYKVESGTQYQLQIDAVFKGVNLNVPTPKSGDWRDMQFYYDTLLPG 1140
Query: 2806 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRTAGLL 2627
NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+PVF+KPK+RTAAEMPRTAGL+
Sbjct: 1141 NSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQVPKEKPVFLKPKIRTAAEMPRTAGLI 1200
Query: 2626 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFSRWLS 2447
ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWD+Y++KEFSG +GMA TRE FSRWLS
Sbjct: 1201 ENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDSYIIKEFSGIEGMAKTREGFSRWLS 1260
Query: 2446 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 2267
KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI
Sbjct: 1261 KQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKKINAI 1320
Query: 2266 FGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYDKSQN 2087
FGPMFSELTRMLLER+DTSKFLFYTRKTP+QIEEFFSDLDSSQA+EILELD+SKYDKSQN
Sbjct: 1321 FGPMFSELTRMLLERVDTSKFLFYTRKTPTQIEEFFSDLDSSQAIEILELDVSKYDKSQN 1380
Query: 2086 EFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTFIGNT 1907
EFHCAVEYKIWEKLGID+WLAEVW+QGHRKTTL+DYTAGIKTCLWYQRKSGDVTTFIGNT
Sbjct: 1381 EFHCAVEYKIWEKLGIDEWLAEVWRQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTFIGNT 1440
Query: 1906 IIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1727
IIIAACLSSMIPM+KVIKAAFCGDDSLIY+PKGLDLPDIQAGANLTWNFEAKLFRKKYGY
Sbjct: 1441 IIIAACLSSMIPMEKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLTWNFEAKLFRKKYGY 1500
Query: 1726 FCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAYFSQL 1547
CGRYVIHHDRGAIVYYDPLKLISKLGCKHI+DEVHLEELRRSLCDV SNLNNCAYFSQL
Sbjct: 1501 LCGRYVIHHDRGAIVYYDPLKLISKLGCKHIKDEVHLEELRRSLCDVASNLNNCAYFSQL 1560
Query: 1546 DEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
DEAVAEVHKTAVGG+F YCSIIKYLSDKRLFKDLFFV
Sbjct: 1561 DEAVAEVHKTAVGGSFAYCSIIKYLSDKRLFKDLFFV 1597
>gb|ACV13190.1| RNA replicase [Ribgrass mosaic virus] gi|256692860|gb|ACV13194.1| RNA
replicase [Ribgrass mosaic virus]
Length = 1601
Score = 2941 bits (7625), Expect = 0.0
Identities = 1430/1601 (89%), Positives = 1528/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNF+AHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFSAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+ YI RLE+QRRPVPEYQRAAFNNYAENPH+VHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIQSYINRLERQRRPVPEYQRAAFNNYAENPHYVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+L+T NGTDTYA+ALHSIYDIPV+EFG+ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 RPFQQCELTTANGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQR+GDKL+FFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQRAGDKLSFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASIT+G+MSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITSGKMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+LKKFQ FD T K
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILKKFQMFDRTTK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDAL GV PSVKETL RGGFVK+AEE+LEIKIPELYCTF+DR VLQYK AEEF
Sbjct: 481 ELIWSSLCDALMGVIPSVKETLVRGGFVKVAEEALEIKIPELYCTFSDRFVLQYKKAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ+++VDPD AIM
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKSVDPDMAAKVVVAIMKC 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQS----EGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L E V+S + LSL N+APFPCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKTEEVKSAERNDVLSLRNDAPFPCVKNLVEGSVPAYGICPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD+ D+DI++FHLKSVDAVK+GAMMSAVYTG IKVQQMKNY+DYLSASLSATVSNLCK
Sbjct: 661 GGFDKFDVDIADFHLKSVDAVKRGAMMSAVYTGSIKVQQMKNYIDYLSASLSATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHG DPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWDEGKPV
Sbjct: 721 VLRDVHGADPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDEGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSLVYSDMGKLKTLTSCC DGEPPEPTAKV+LVDGVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLVYSDMGKLKTLTSCCLDGEPPEPTAKVILVDGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNF EDL+LV GKEASKMIIRRAN AGV+RADKDNVRTVDSFLMHPP+R FKRLFIDEGL
Sbjct: 841 VNFQEDLILVLGKEASKMIIRRANHAGVMRADKDNVRTVDSFLMHPPRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKE RR TLRC
Sbjct: 901 MLHTGCVNFLLLLSHCDVAYVYGDTQQIPFICRVANFPYPAHFAKLVVDEKEIRRTTLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVTFFLNKKYDGAV+CTS+VERSV+AEV+RGKGA NPITLPLEGKILTFTQADKFELL
Sbjct: 961 PADVTFFLNKKYDGAVMCTSAVERSVNAEVVRGKGAFNPITLPLEGKILTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGY DVNTVHEVQGETYEKTAIVRLT+TPLEIISRASPHVLVALTRHTTRC+YYTVVLD
Sbjct: 1021 EKGYADVNTVHEVQGETYEKTAIVRLTSTPLEIISRASPHVLVALTRHTTRCRYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMVNVISEMEKLSNFILDMYKV +G Q QLQID VFKGTNLFV TPK GDWRDMQFYYDT
Sbjct: 1081 PMVNVISEMEKLSNFILDMYKVEAGIQYQLQIDAVFKGTNLFVQTPKLGDWRDMQFYYDT 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+P F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQIPKEQPSFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLV EKFWDAY+ KEFSGT+ M++TRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVAEKFWDAYIDKEFSGTNKMSLTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLS+QESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK
Sbjct: 1261 RWLSRQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFGPMF+ELTRMLLER+D+SKFLFYTRKTP QIEEFFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGPMFAELTRMLLERVDSSKFLFYTRKTPGQIEEFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDV+TF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVSTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIA CLSSMIPMDKVIKAAFCGDDSL+Y+PKG+DLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIATCLSSMIPMDKVIKAAFCGDDSLVYIPKGMDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDVTSNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDSVHLEELRESLCDVTSNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
FSQLDEAVAEVHKTAVGG+F +CSIIKYLSDKRLFKDLFFV
Sbjct: 1561 FSQLDEAVAEVHKTAVGGSFAFCSIIKYLSDKRLFKDLFFV 1601
>ref|YP_005476600.1| replicase readthrough component [Ribgrass mosaic virus]
gi|337271810|gb|AEI69660.1| replicase readthrough
component [Ribgrass mosaic virus]
Length = 1601
Score = 2939 bits (7618), Expect = 0.0
Identities = 1427/1601 (89%), Positives = 1529/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNF+AHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFSAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+ YI RLE+QRRPVPEYQ+AAFNNYAENP +VHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIQSYINRLERQRRPVPEYQKAAFNNYAENPRYVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+L+T NGTDTYA+ALHSIYDIPV+EFG+ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 RPFQQCELTTANGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQR+GDKL+FFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQRAGDKLSFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASIT+G+MSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITSGKMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+LKKFQKFD + K
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILKKFQKFDRSTK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDAL GV PSVKETL RGGFVK+AEE+LEIKIPELYCTF+DRLVLQYK AEEF
Sbjct: 481 ELIWSSLCDALMGVIPSVKETLVRGGFVKVAEEALEIKIPELYCTFSDRLVLQYKKAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ++NVDPD AIM
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKNVDPDMAAKVVVAIMKC 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQS----EGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L E +S + LSL N+AP+PCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKTEEAKSAERDDVLSLRNDAPYPCVKNLVEGSVPAYGICPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD+ D+DI++FHLKSVDAVK+GAMMSAVYTG IKVQQMKNY+DYLSASLSATVSNLCK
Sbjct: 661 GGFDKFDVDIADFHLKSVDAVKRGAMMSAVYTGSIKVQQMKNYIDYLSASLSATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHG DPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWDEGKPV
Sbjct: 721 VLRDVHGADPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDEGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSLVYSDMGKLKTLTSCC DGEPPEP KV+LVDGVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLVYSDMGKLKTLTSCCLDGEPPEPYTKVILVDGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNFSEDL+LVPGKEASKMIIRRAN AGV+RADKDNVRTVDSFLMHPP+R FKRLFIDEGL
Sbjct: 841 VNFSEDLILVPGKEASKMIIRRANHAGVMRADKDNVRTVDSFLMHPPRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKE RR+TLRC
Sbjct: 901 MLHTGCVNFLLLLSHCDVAYVYGDTQQIPFICRVANFPYPAHFAKLVVDEKEVRRITLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVTFFLNKKYDGAV+CTS+VERSV AEV+RGKGALNPITLPLEGKILTFTQADKFELL
Sbjct: 961 PADVTFFLNKKYDGAVMCTSAVERSVGAEVVRGKGALNPITLPLEGKILTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGY DVNTVHEVQGETYEKTAIVRLT+TPL IISRASPHVLVALTRHTTRC+YYTVVLD
Sbjct: 1021 EKGYTDVNTVHEVQGETYEKTAIVRLTSTPLGIISRASPHVLVALTRHTTRCRYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMV+VISEMEKLSNFILDMYKV +G Q QLQID VFKGTNLFV TPKSGDWRDMQFYYDT
Sbjct: 1081 PMVSVISEMEKLSNFILDMYKVEAGIQYQLQIDAVFKGTNLFVQTPKSGDWRDMQFYYDT 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+P F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQIPKEQPSFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLV EKFWDAY+ KEFSGT+ M++TRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVAEKFWDAYIDKEFSGTNKMSLTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLSKQE+ST+GQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK
Sbjct: 1261 RWLSKQETSTIGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFGPMF+ELTRMLLER+D+SKFLFYTRKTP QIEEFFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGPMFAELTRMLLERVDSSKFLFYTRKTPGQIEEFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDV+TF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVSTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIA CLSSMIPMDKVIKAAFCGDDSLIY+PKG+DLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIATCLSSMIPMDKVIKAAFCGDDSLIYIPKGIDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDVTSNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDVVHLEELRESLCDVTSNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
FSQLDEAVAEVHKTAVGG+F +CSI+KYLSDKRLFKDLFFV
Sbjct: 1561 FSQLDEAVAEVHKTAVGGSFAFCSIVKYLSDKRLFKDLFFV 1601
>gb|AEI69664.1| replicase readthrough component [Ribgrass mosaic virus]
Length = 1601
Score = 2935 bits (7608), Expect = 0.0
Identities = 1425/1601 (89%), Positives = 1527/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNF+AHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFSAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA+ YI RLE+QRRPVPEYQ+AAFNNYAENP +VHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIQSYINRLERQRRPVPEYQKAAFNNYAENPRYVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+L+T NGTDTYA+ALHSIYDIPV+EFG+ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 RPFQQCELTTANGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQR+GDKL+FFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQRAGDKLSFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASIT+G+MSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITSGKMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+LKKFQKFD + K
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILKKFQKFDRSTK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIWSSLCDAL GV PSVKETL RGGFVK+AEE+LEIKIPELYCTF+DRLVLQYK AEEF
Sbjct: 481 ELIWSSLCDALMGVIPSVKETLVRGGFVKVAEEALEIKIPELYCTFSDRLVLQYKKAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ++NVDPD AIM
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKNVDPDMAAKVVVAIMKC 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQS----EGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L E +S + LSL N+AP+PCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKTEEAKSAERDDVLSLRNDAPYPCVKNLVEGSVPAYGICPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD+ D+DI++FHLKSVDAVK+GAMMSAVYTG IKVQQMKNY+DYLSASLSATVSNLCK
Sbjct: 661 GGFDKFDVDIADFHLKSVDAVKRGAMMSAVYTGSIKVQQMKNYIDYLSASLSATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHG DPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWDEGKPV
Sbjct: 721 VLRDVHGADPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDEGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSLVYSDMGKLKTLTSCC DGEPPEP KV+LVDGVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLVYSDMGKLKTLTSCCLDGEPPEPYTKVILVDGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNFSEDL+LVPGKEASKMIIRRAN AGV+RADKDNVRTVDSFLMHPP+R FKRLFIDEGL
Sbjct: 841 VNFSEDLILVPGKEASKMIIRRANHAGVMRADKDNVRTVDSFLMHPPRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLSHC+V Y+YGDTQQIPFICRVANFPYP HFAKLVVDEKE RR+TLRC
Sbjct: 901 MLHTGCVNFLLLLSHCDVAYVYGDTQQIPFICRVANFPYPAHFAKLVVDEKEVRRITLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVTFFLNKKYDGAV+CTS+VERSV AEV+RGKGALNPITLPLEGKILTFTQADKFELL
Sbjct: 961 PADVTFFLNKKYDGAVMCTSAVERSVGAEVVRGKGALNPITLPLEGKILTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGY DVNTVHEVQGETYEKTAIVRLT+TPL IISRASPHVLVALTRHTTRC+YYTVVLD
Sbjct: 1021 EKGYTDVNTVHEVQGETYEKTAIVRLTSTPLGIISRASPHVLVALTRHTTRCRYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMV+VI EMEKLSNFILDMYKV +G Q QLQID VFKGTNLFV TPKSGDWRDMQFYYD
Sbjct: 1081 PMVSVIPEMEKLSNFILDMYKVEAGIQYQLQIDAVFKGTNLFVQTPKSGDWRDMQFYYDA 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+P F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQIPKEQPSFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLV EKFWDAY+ KEFSGT+ M++TRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVAEKFWDAYIDKEFSGTNKMSLTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLSKQE+ST+GQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK
Sbjct: 1261 RWLSKQETSTIGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFGPMF+ELTRMLLER+D+SKFLFYTRKTP QIEEFFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGPMFAELTRMLLERVDSSKFLFYTRKTPGQIEEFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDV+TF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVSTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIA CLSSMIPMDKVIKAAFCGDDSLIY+PKG+DLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIATCLSSMIPMDKVIKAAFCGDDSLIYIPKGIDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDVTSNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDVVHLEELRESLCDVTSNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
FSQLDEAVAEVHKTAVGG+F +CSI+KYLSDKRLFKDLFFV
Sbjct: 1561 FSQLDEAVAEVHKTAVGGSFAFCSIVKYLSDKRLFKDLFFV 1601
>gb|AEU04723.1| RNA replicase [Turnip vein-clearing virus]
Length = 1601
Score = 2934 bits (7606), Expect = 0.0
Identities = 1427/1601 (89%), Positives = 1526/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNF+AHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFSAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHK+A++ Y+ RL++Q+RPVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKDAIYSYVNRLKRQQRPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
+PFQQC+L+T NGTDTYA+ALHSIYDIPVDEFG ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 KPFQQCELTTANGTDTYAVALHSIYDIPVDEFGPALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQR+GD L+FFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQRAGDNLSFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AW YKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWHYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASITTGRMSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITTGRMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+LKKFQKFD T
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILKKFQKFDRTTN 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDAL GV PSVKETL RGGFVK+AE++LEIKIPELYCTF DRLVLQYK AEEF
Sbjct: 481 ELIWTSLCDALMGVIPSVKETLVRGGFVKVAEQALEIKIPELYCTFADRLVLQYKKAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ++NVDPD AIM
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKNVDPDMAAKVVVAIMKC 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQS----EGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L E S E LSL N+APFPCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKTEEGSSAEHKEVLSLQNDAPFPCVKNLVEGSVPAYGMCPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD++D+DI++FHLKSVDAVK+G MMSAVYTG IKVQQMKNY+DYLSASLSATVSNLCK
Sbjct: 661 GGFDKLDVDIADFHLKSVDAVKRGTMMSAVYTGSIKVQQMKNYIDYLSASLSATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHGVDPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWD+GKPV
Sbjct: 721 VLRDVHGVDPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDDGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSL+YSDMGKLKTLTSC +GEPPEP AKV+LVDGVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLIYSDMGKLKTLTSCSPNGEPPEPNAKVILVDGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNFSEDL+LVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHP +R FKRLFIDEGL
Sbjct: 841 VNFSEDLILVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPSRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLS C+V Y+YGDTQQIPFICRVANFPYP HFAKLV DEKE RRVTLRC
Sbjct: 901 MLHTGCVNFLLLLSQCDVAYVYGDTQQIPFICRVANFPYPAHFAKLVADEKEVRRVTLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVT+FLNKKYDGAV+CTS+VERSV AEV+RGKGALNPITLPLEGK+LTFTQADKFELL
Sbjct: 961 PADVTYFLNKKYDGAVMCTSAVERSVKAEVVRGKGALNPITLPLEGKVLTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGYKDVNTVHEVQGETYEKTAIVRLT+TPLEIISRASPHVLVALTRHTTRCKYYTVVLD
Sbjct: 1021 EKGYKDVNTVHEVQGETYEKTAIVRLTSTPLEIISRASPHVLVALTRHTTRCKYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMVNVISEMEKLSNF+LDMY+V +G Q QLQID VFKGTNLFV TPKSGDWRDMQFYYDT
Sbjct: 1081 PMVNVISEMEKLSNFLLDMYRVEAGIQYQLQIDAVFKGTNLFVQTPKSGDWRDMQFYYDT 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKE+P+F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKEQPIFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAP LTGTIDIEDTASLV EKFWDAY+ KEFSGT+ M++TRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPHLTGTIDIEDTASLVAEKFWDAYIDKEFSGTEKMSLTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK
Sbjct: 1261 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFGPMFSELTRMLLERID+SKFLFYTRKTP+QIE+FFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGPMFSELTRMLLERIDSSKFLFYTRKTPAQIEDFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDVTTF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVTTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDV SNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDIVHLEELRESLCDVASNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
FSQLDEAVAEVHKTAVGG+F +CSIIKYLSDKRLF+DLF V
Sbjct: 1561 FSQLDEAVAEVHKTAVGGSFAFCSIIKYLSDKRLFRDLFSV 1601
>gb|AFN80475.1| RNA replicase readthrough component [Ribgrass mosaic virus]
Length = 1601
Score = 2927 bits (7589), Expect = 0.0
Identities = 1425/1601 (89%), Positives = 1524/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTV+MQTLQAAAGRNSLVNDLASR VYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTVHMQTLQAAAGRNSLVNDLASRHVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEAV YI+RLE+QRRPVP YQRAAFNNYAENP FVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAVQSYISRLERQRRPVPGYQRAAFNNYAENPRFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+L+T NGTDTYA+ALHSIYDIPV+EFG+ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 RPFQQCELTTANGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQR+GDKL+FFFHNESTLNYTHSF+NIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQRAGDKLSFFFHNESTLNYTHSFNNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASIT+G+MSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITSGKMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+LKKFQKFD + K
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILKKFQKFDRSTK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDAL GV PSVKETL RGGFVK+AEE+LEIKIPELYCTF+DRLVLQYK AEEF
Sbjct: 481 ELIWTSLCDALVGVIPSVKETLVRGGFVKVAEEALEIKIPELYCTFSDRLVLQYKRAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ+++VDPD AIM
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKSVDPDMAAKVVVAIMKC 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQS----EGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L E +S + LSL N+AP+PCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKVEEAKSAEHNDVLSLRNDAPYPCVKNLVEGSVPAYGMCPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD+ D+DI++FHLKSVDAVK+GAMMSAVYTG IKVQQMKNY+DYLSASLSATVSNLCK
Sbjct: 661 GGFDKFDVDIADFHLKSVDAVKRGAMMSAVYTGSIKVQQMKNYIDYLSASLSATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHG DPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWDEGKPV
Sbjct: 721 VLRDVHGADPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDEGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSLVYSDMGKLKTLTSCC DGEPPEP AKV+LVDGVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLVYSDMGKLKTLTSCCLDGEPPEPNAKVILVDGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNFSEDL+LVPGKEASKMIIRRAN AGV+RADKDNVRTVDSFLMHPP+R FKRLFIDEGL
Sbjct: 841 VNFSEDLILVPGKEASKMIIRRANHAGVMRADKDNVRTVDSFLMHPPRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLSHC+V Y+YGDTQQIPFICRVANFPYP HFA+L VDEKE RR TLRC
Sbjct: 901 MLHTGCVNFLLLLSHCDVAYVYGDTQQIPFICRVANFPYPAHFARLAVDEKEVRRTTLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVTFFLNKKYDGAV+CTS+VERSV AEV+RGKGA NPITLPLEGKILTFTQADKFELL
Sbjct: 961 PADVTFFLNKKYDGAVMCTSAVERSVKAEVVRGKGAFNPITLPLEGKILTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGY DVNTVHEVQGETYEKTAIVRLT+TPLEIISRASPHVLVALTRHTTRC+YYTVVLD
Sbjct: 1021 EKGYADVNTVHEVQGETYEKTAIVRLTSTPLEIISRASPHVLVALTRHTTRCRYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMVNVISEMEKLSNFILDMYKV +G Q QLQID VFKGTNLFV TPKSGDWRDMQFYYDT
Sbjct: 1081 PMVNVISEMEKLSNFILDMYKVEAGIQYQLQIDAVFKGTNLFVQTPKSGDWRDMQFYYDT 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+P F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQIPKEQPSFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLV EKFWDAY+ KEFSGT+ M++TRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVAEKFWDAYIDKEFSGTNKMSLTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLSKQES TVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEY ALQTIVYHSKK
Sbjct: 1261 RWLSKQESFTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYHALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFG MF+ELTRMLLER+D+SKFLFYTRKTP QIEEFFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGRMFAELTRMLLERVDSSKFLFYTRKTPGQIEEFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDV+TF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVSTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIA CLSSMIPMDKVIKAAFCGDDSL+Y+PKG+DLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIATCLSSMIPMDKVIKAAFCGDDSLVYIPKGMDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDVTSNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDAVHLEELRESLCDVTSNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
FSQLDEAVAEVHKTAVGG+F +CSI+KYLSDKRLFKDLFFV
Sbjct: 1561 FSQLDEAVAEVHKTAVGGSFAFCSIVKYLSDKRLFKDLFFV 1601
>gb|AEI69657.1| replicase readthrough component [Ribgrass mosaic virus]
Length = 1601
Score = 2925 bits (7582), Expect = 0.0
Identities = 1423/1601 (88%), Positives = 1524/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQTV+MQTLQAAAGRNSLVNDLASR VYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTVHMQTLQAAAGRNSLVNDLASRHVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNFAAHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEAV YI+RLE+QRRPVP YQRAAFNNYAENP FVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAVQSYISRLERQRRPVPGYQRAAFNNYAENPRFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
RPFQQC+L+T NGTDTYA+ALHSIYDIPV+EFG+ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 RPFQQCELTTANGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQR+GDKL+FFFHNESTLNYTHSF+NIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQRAGDKLSFFFHNESTLNYTHSFNNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AWEYKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWEYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASIT+G+MSRREV+VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITSGKMSRREVMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+L+KFQKFD + K
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILEKFQKFDRSTK 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDAL GV PSVKETL RGGFVK+AEE+LEIKIPELYCTF+DRLVLQYK AEEF
Sbjct: 481 ELIWTSLCDALVGVIPSVKETLVRGGFVKVAEEALEIKIPELYCTFSDRLVLQYKRAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ+++VDPD AIM
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKSVDPDMAAKVVVAIMKC 600
Query: 4426 ELTLPFKKPTEEEVAEALSGEVVQS----EGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L E S E LSL N+APFPCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKTEEGSSAEHKEVLSLQNDAPFPCVKNLVEGSVPAYGMCPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD++D+DI++FHLKSVDAVK+G MMSAVYTG IKVQQMKNY+DYLSASLSATVSNLCK
Sbjct: 661 GGFDKLDVDIADFHLKSVDAVKRGTMMSAVYTGSIKVQQMKNYIDYLSASLSATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHGVDPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWD+GKPV
Sbjct: 721 VLRDVHGVDPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDDGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSL+YSDMGKLKTLTSC +GEPPEP AKV+LV GVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLIYSDMGKLKTLTSCSPNGEPPEPNAKVILVGGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNFSEDL+LVPGKEASKMIIRRAN AGV+RADKDNVRTVDSFLMHPP+R FKRLFIDEGL
Sbjct: 841 VNFSEDLILVPGKEASKMIIRRANHAGVMRADKDNVRTVDSFLMHPPRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLSHC+V Y+YGDTQQIPFICRVANFPYP HFA+L VDEKE RR TLRC
Sbjct: 901 MLHTGCVNFLLLLSHCDVAYVYGDTQQIPFICRVANFPYPAHFARLAVDEKEVRRTTLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVTFFLNKKYDGAV+CTS+VERSV AEV+RGKGA NPITLPLEGKILTFTQADKFELL
Sbjct: 961 PADVTFFLNKKYDGAVMCTSAVERSVKAEVVRGKGAFNPITLPLEGKILTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGY DVNTVHEVQGETYEKTAIVRLT+TPLEIISRASPHVLVALTRHTTRC+YYTVVLD
Sbjct: 1021 EKGYADVNTVHEVQGETYEKTAIVRLTSTPLEIISRASPHVLVALTRHTTRCRYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMVNVISEMEKLSNFILDMYKV +G Q QLQID VFKGTNLFV TPKSGDWRDMQFYYDT
Sbjct: 1081 PMVNVISEMEKLSNFILDMYKVEAGIQYQLQIDAVFKGTNLFVQTPKSGDWRDMQFYYDT 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQ+PKE+P F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQIPKEQPSFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLV EKFWDAY+ KEFSGT+ M++TRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVAEKFWDAYIDKEFSGTNKMSLTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK
Sbjct: 1261 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFGPMF+ELTRMLLER+D+SKFLFYTRKTP QIEEFFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGPMFAELTRMLLERVDSSKFLFYTRKTPGQIEEFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAGIKTCLWYQRKSGDV+TF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGIKTCLWYQRKSGDVSTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIA CLSSMIPMDKVIKAAFCGDDSL+Y+PKG+DLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIATCLSSMIPMDKVIKAAFCGDDSLVYIPKGMDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDVTSNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDVVHLEELRESLCDVTSNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
F QLDEAVAEVHKTAVGG+F +CSI+KYLSDKRLFKDLFFV
Sbjct: 1561 FLQLDEAVAEVHKTAVGGSFAFCSIVKYLSDKRLFKDLFFV 1601
>ref|NP_046151.1| unnamed protein product [Turnip vein-clearing virus]
gi|3914883|sp|Q88920.1|RDRP_TVCV RecName: Full=Replicase
large subunit; AltName: Full=183 kDa protein; AltName:
Full=RNA-directed RNA polymerase; Contains: RecName:
Full=Replicase small subunit; AltName: Full=126 kDa
protein; AltName: Full=Methyltransferase/RNA helicase;
Short=MT/HEL gi|619645|gb|AAC02783.1| RNA replicase
read-through component [Turnip vein-clearing virus]
gi|1586167|prf||2203312A RNA replicase
Length = 1601
Score = 2924 bits (7580), Expect = 0.0
Identities = 1421/1601 (88%), Positives = 1525/1601 (95%), Gaps = 4/1601 (0%)
Frame = -3
Query: 6226 MAQFQQTVNMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTL 6047
MAQFQQT++MQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSK+VSTEQTL
Sbjct: 1 MAQFQQTIDMQTLQAAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKAVSTEQTL 60
Query: 6046 LASDAYPEFEISFTHTQHAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGR 5867
+A++AYPEFEISFTHTQ AVHSLAGGLR+LELEYLMMQVPFGSLTYDIGGNF+AHLFKGR
Sbjct: 61 IATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFSAHLFKGR 120
Query: 5866 DYVHCCMPNLDVRDIARHEGHKEAVFCYIARLEKQRRPVPEYQRAAFNNYAENPHFVHCD 5687
DYVHCCMPNLDVRDIARHEGHKEA++ Y+ RL++Q+RPVPEYQRAAFNNYAENPHFVHCD
Sbjct: 121 DYVHCCMPNLDVRDIARHEGHKEAIYSYVNRLKRQQRPVPEYQRAAFNNYAENPHFVHCD 180
Query: 5686 RPFQQCKLSTVNGTDTYAIALHSIYDIPVDEFGAALLRKNVKICYAAFHFHENMLLDCDS 5507
+PFQQC+L+T GTDTYA+ALHSIYDIPV+EFG+ALLRKNVK C+AAFHFHENMLLDCD+
Sbjct: 181 KPFQQCELTTAYGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFAAFHFHENMLLDCDT 240
Query: 5506 VTLEDIGATFQRSGDKLNFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRYVYHKEFLVT 5327
VTL++IGATFQ+SGD L+FFFHNESTLNYTHSFSNIIKYVCKTFFPASQR+VYHKEFLVT
Sbjct: 241 VTLDEIGATFQKSGDNLSFFFHNESTLNYTHSFSNIIKYVCKTFFPASQRFVYHKEFLVT 300
Query: 5326 RVNTWYCKFTRVDTFTLFRGVYNTSVDSEEFYKAMENAWEYKKTLAMLNSERTIFKDSAA 5147
RVNTWYCKFTRVDTFTLFRGVY+ +VD EEFYKAM++AW YKKTLAMLN+ERTIFKD+AA
Sbjct: 301 RVNTWYCKFTRVDTFTLFRGVYHNNVDCEEFYKAMDDAWHYKKTLAMLNAERTIFKDNAA 360
Query: 5146 MNFWFPKVRDMVIIPLFDASITTGRMSRREVLVNKDFVYTVLNHIKTYQAKALTYANVLS 4967
+NFWFPKVRDMVI+PLFDASITTGRMSRRE++VNKDFVYTVLNHIKTYQAKALTYANVLS
Sbjct: 361 LNFWFPKVRDMVIVPLFDASITTGRMSRREIMVNKDFVYTVLNHIKTYQAKALTYANVLS 420
Query: 4966 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHVQDEIVLKKFQKFDATAK 4787
FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFL+TKL HVQDEI+LKKFQKFD T
Sbjct: 421 FVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHVQDEIILKKFQKFDRTTN 480
Query: 4786 ELIWSSLCDALKGVFPSVKETLARGGFVKLAEESLEIKIPELYCTFTDRLVLQYKMAEEF 4607
ELIW+SLCDAL GV PSVKETL RGGFVK+AE++LEIK+PELYCTF DRLVLQYK AEEF
Sbjct: 481 ELIWTSLCDALMGVIPSVKETLVRGGFVKVAEQALEIKVPELYCTFADRLVLQYKKAEEF 540
Query: 4606 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLDSFKELCQKRNVDPDXXXXXXXAIMNN 4427
QSCDLSKPLEESEKYYNALSELSVLENLDSFDL++FK LCQ++NVDPD AIM +
Sbjct: 541 QSCDLSKPLEESEKYYNALSELSVLENLDSFDLEAFKTLCQQKNVDPDMAAKVVVAIMKS 600
Query: 4426 ELTLPFKKPTEEEVAEALS-GE---VVQSEGLSLSNNAPFPCVKNLKEGLVPACGVCPTG 4259
ELTLPFKKPTEEE++E+L GE E LSL N+APFPCVKNL EG VPA G+CP G
Sbjct: 601 ELTLPFKKPTEEEISESLKPGEGSCAEHKEVLSLQNDAPFPCVKNLVEGSVPAYGMCPKG 660
Query: 4258 GNFDRVDMDISEFHLKSVDAVKKGAMMSAVYTGKIKVQQMKNYVDYLSASLSATVSNLCK 4079
G FD++D+DI++FHLKSVDAVKKG MMSAVYTG IKVQQMKNY+DYLSASL+ATVSNLCK
Sbjct: 661 GGFDKLDVDIADFHLKSVDAVKKGTMMSAVYTGSIKVQQMKNYIDYLSASLAATVSNLCK 720
Query: 4078 VLRDVHGVDPESQEKSGVWDVRKGRWLLKPNARCHAWGVAEDADHKLVIVLLNWDEGKPV 3899
VLRDVHGVDPESQEKSGVWDVR+GRWLLKPNA+ HAWGVAEDA+HKLVIVLLNWD+GKPV
Sbjct: 721 VLRDVHGVDPESQEKSGVWDVRRGRWLLKPNAKSHAWGVAEDANHKLVIVLLNWDDGKPV 780
Query: 3898 CDETWFRLAVSSDSLVYSDMGKLKTLTSCCRDGEPPEPTAKVVLVDGVPGCGKTKEILER 3719
CDETWFR+AVSSDSL+YSDMGKLKTLTSC +GEPPEP AKV+LVDGVPGCGKTKEI+E+
Sbjct: 781 CDETWFRVAVSSDSLIYSDMGKLKTLTSCSPNGEPPEPNAKVILVDGVPGCGKTKEIIEK 840
Query: 3718 VNFSEDLVLVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPPKREFKRLFIDEGL 3539
VNFSEDL+LVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHP +R FKRLFIDEGL
Sbjct: 841 VNFSEDLILVPGKEASKMIIRRANQAGVIRADKDNVRTVDSFLMHPSRRVFKRLFIDEGL 900
Query: 3538 MLHTGCVNFLTLLSHCEVVYIYGDTQQIPFICRVANFPYPKHFAKLVVDEKEDRRVTLRC 3359
MLHTGCVNFL LLS C+V Y+YGDT+QIPFICRVANFPYP HFAKLV DEKE RRVTLRC
Sbjct: 901 MLHTGCVNFLLLLSQCDVAYVYGDTKQIPFICRVANFPYPAHFAKLVADEKEVRRVTLRC 960
Query: 3358 PADVTFFLNKKYDGAVLCTSSVERSVSAEVLRGKGALNPITLPLEGKILTFTQADKFELL 3179
PADVT+FLNKKYDGAV+CTS+VERSV AEV+RGKGALNPITLPLEGKILTFTQADKFELL
Sbjct: 961 PADVTYFLNKKYDGAVMCTSAVERSVKAEVVRGKGALNPITLPLEGKILTFTQADKFELL 1020
Query: 3178 DKGYKDVNTVHEVQGETYEKTAIVRLTATPLEIISRASPHVLVALTRHTTRCKYYTVVLD 2999
+KGYKDVNTVHEVQGETYEKTAIVRLT+TPLEIIS ASPHVLVALTRHTT CKYYTVVLD
Sbjct: 1021 EKGYKDVNTVHEVQGETYEKTAIVRLTSTPLEIISSASPHVLVALTRHTTCCKYYTVVLD 1080
Query: 2998 PMVNVISEMEKLSNFILDMYKVGSGTQ*QLQIDTVFKGTNLFVPTPKSGDWRDMQFYYDT 2819
PMVNVISEMEKLSNF+LDMY+V +G Q QLQID VF+ +NLFV TPKSGDWRDMQFYYD
Sbjct: 1081 PMVNVISEMEKLSNFLLDMYRVEAGVQYQLQIDAVFRDSNLFVQTPKSGDWRDMQFYYDA 1140
Query: 2818 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKERPVFMKPKLRTAAEMPRT 2639
LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKE+P+F+KPK+RTAAEMPRT
Sbjct: 1141 LLPGNSTILNEFDAVTMNLRDISLNVKDCRIDFSKSVQLPKEQPIFLKPKIRTAAEMPRT 1200
Query: 2638 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDAYVVKEFSGTDGMAMTRESFS 2459
AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWD+YV KEFSGT+ M MTRESFS
Sbjct: 1201 AGLLENLVAMIKRNMNAPDLTGTIDIEDTASLVVEKFWDSYVDKEFSGTNEMTMTRESFS 1260
Query: 2458 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 2279
RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK
Sbjct: 1261 RWLSKQESSTVGQLADFNFVDLPAVDEYKHMIKSQPKQKLDLSIQDEYPALQTIVYHSKK 1320
Query: 2278 INAIFGPMFSELTRMLLERIDTSKFLFYTRKTPSQIEEFFSDLDSSQAMEILELDISKYD 2099
INAIFGPMFSELTRMLLERID+SKFLFYTRKTP+QIE+FFSDLDS+QAMEILELDISKYD
Sbjct: 1321 INAIFGPMFSELTRMLLERIDSSKFLFYTRKTPAQIEDFFSDLDSTQAMEILELDISKYD 1380
Query: 2098 KSQNEFHCAVEYKIWEKLGIDDWLAEVWKQGHRKTTLRDYTAGIKTCLWYQRKSGDVTTF 1919
KSQNEFHCAVEYKIWEKLGID+WLAEVWKQGHRKTTL+DYTAG+KTCLWYQRKSGDVTTF
Sbjct: 1381 KSQNEFHCAVEYKIWEKLGIDEWLAEVWKQGHRKTTLKDYTAGVKTCLWYQRKSGDVTTF 1440
Query: 1918 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYVPKGLDLPDIQAGANLTWNFEAKLFRK 1739
IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIY+PKGLDLPDIQAGANL WNFEAKLFRK
Sbjct: 1441 IGNTIIIAACLSSMIPMDKVIKAAFCGDDSLIYIPKGLDLPDIQAGANLMWNFEAKLFRK 1500
Query: 1738 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDEVHLEELRRSLCDVTSNLNNCAY 1559
KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRD VHLEELR SLCDV SNLNNCAY
Sbjct: 1501 KYGYFCGRYVIHHDRGAIVYYDPLKLISKLGCKHIRDVVHLEELRESLCDVASNLNNCAY 1560
Query: 1558 FSQLDEAVAEVHKTAVGGAFVYCSIIKYLSDKRLFKDLFFV 1436
FSQLDEAVAEVHKTAVGG+F +CSIIKYLSDKRLF+DLFFV
Sbjct: 1561 FSQLDEAVAEVHKTAVGGSFAFCSIIKYLSDKRLFRDLFFV 1601